RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-206ENST00000461574 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 LINC00472Q9H8W2 130 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
BRCA1-206ENST00000461574 BPY2O14599 106 aa2.28□□□□□ -2.04
BRCA1-206ENST00000461574 DNAL4O96015 105 aa2.28□□□□□ -2.04
BRCA1-206ENST00000461574 IGKV3D-7A0A0C4DH55 119 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 NDUFB1O75438 58 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 MT1BP07438 61 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 SPRR2EP22531 72 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 S100A2P29034 98 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 SPRR2BP35325 72 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 SPRR2AP35326 72 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 COL5A1-AS1Q5SY13 56 aa2.27□□□□□ -2.05
BRCA1-206ENST00000461574 GTF2H5Q6ZYL4 71 aa2.26□□□□□ -2.05
BRCA1-206ENST00000461574 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
BRCA1-206ENST00000461574 ORMDL1Q9P0S3 153 aa2.26□□□□□ -2.05
BRCA1-206ENST00000461574 TMEM256-PLSCR3K7ERE1 68 aa2.25□□□□□ -2.05
BRCA1-206ENST00000461574 HIST1H4AP62805 103 aaKnown RBP2.25□□□□□ -2.05
BRCA1-206ENST00000461574 HSD52Q0P140 79 aa2.25□□□□□ -2.05
BRCA1-206ENST00000461574 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
BRCA1-206ENST00000461574 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
BRCA1-206ENST00000461574 H3BQ85 93 aa2.24□□□□□ -2.05
BRCA1-206ENST00000461574 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
BRCA1-206ENST00000461574 NAA38Q9BRA0 125 aaKnown RBP2.24□□□□□ -2.05
BRCA1-206ENST00000461574 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
BRCA1-206ENST00000461574 A0A0B4J2C4 111 aa2.23□□□□□ -2.05
BRCA1-206ENST00000461574 K7ERS5 55 aa2.23□□□□□ -2.05
BRCA1-206ENST00000461574 TMEM258P61165 79 aa2.23□□□□□ -2.05
BRCA1-206ENST00000461574 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
BRCA1-206ENST00000461574 CCDC179H3BU77 68 aa2.22□□□□□ -2.05
BRCA1-206ENST00000461574 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
BRCA1-206ENST00000461574 C2orf91Q6ZV80 131 aa2.22□□□□□ -2.05
BRCA1-206ENST00000461574 CEND1Q8N111 149 aa2.22□□□□□ -2.05
BRCA1-206ENST00000461574 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
BRCA1-206ENST00000461574 UQCRQO14949 82 aa2.21□□□□□ -2.06
BRCA1-206ENST00000461574 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
BRCA1-206ENST00000461574 PRO1854Q9UHT4 67 aa2.21□□□□□ -2.06
BRCA1-206ENST00000461574 SPRR2DP22532 72 aa2.2□□□□□ -2.06
BRCA1-206ENST00000461574 RBM3P98179 157 aaKnown RBP2.2□□□□□ -2.06
BRCA1-206ENST00000461574 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
BRCA1-206ENST00000461574 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
BRCA1-206ENST00000461574 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
BRCA1-206ENST00000461574 S4R3F8 94 aa2.2□□□□□ -2.06
BRCA1-206ENST00000461574 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
BRCA1-206ENST00000461574 COX6CP09669 75 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 COX8AP10176 69 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 PYY3Q5JQD4 70 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 CSAG1Q6PB30 78 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 Q6ZQT0 140 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 TMEM254Q8TBM7 123 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 PRO0461Q9UI25 63 aa2.19□□□□□ -2.06
BRCA1-206ENST00000461574 K7ERJ3 54 aa2.18□□□□□ -2.06
BRCA1-206ENST00000461574 KLKP1Q107X0 134 aa2.18□□□□□ -2.06
BRCA1-206ENST00000461574 ADM2Q7Z4H4 148 aa2.17□□□□□ -2.06
BRCA1-206ENST00000461574 PRO2289Q9P1D8 64 aa2.17□□□□□ -2.06
BRCA1-206ENST00000461574 MMP24-AS1A0A0U1RRL7 71 aa2.16□□□□□ -2.06
BRCA1-206ENST00000461574 hDV103S1A0JD37 113 aa2.16□□□□□ -2.06
BRCA1-206ENST00000461574 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
BRCA1-206ENST00000461574 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
BRCA1-206ENST00000461574 A6NED7 52 aa2.15□□□□□ -2.07
BRCA1-206ENST00000461574 H3BT86 120 aa2.15□□□□□ -2.07
BRCA1-206ENST00000461574 FXYD2P54710 66 aa2.15□□□□□ -2.07
BRCA1-206ENST00000461574 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
BRCA1-206ENST00000461574 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
BRCA1-206ENST00000461574 K7EQZ3 153 aa2.14□□□□□ -2.07
BRCA1-206ENST00000461574 NREPQ16612 68 aa2.14□□□□□ -2.07
BRCA1-206ENST00000461574 SPATA45Q537H7 98 aa2.14□□□□□ -2.07
BRCA1-206ENST00000461574 BAALC-AS2P0C853 105 aa2.13□□□□□ -2.07
BRCA1-206ENST00000461574 Q5W150 140 aa2.13□□□□□ -2.07
BRCA1-206ENST00000461574 C1orf64Q8NEQ6 169 aa2.13□□□□□ -2.07
BRCA1-206ENST00000461574 VAMP8Q9BV40 100 aa2.13□□□□□ -2.07
BRCA1-206ENST00000461574 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
BRCA1-206ENST00000461574 JMJD7-PLA2G4BH0Y9G9 81 aa2.12□□□□□ -2.07
BRCA1-206ENST00000461574 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
BRCA1-206ENST00000461574 CASC2Q6XLA1 102 aa2.11□□□□□ -2.07
BRCA1-206ENST00000461574 LOC110117498A0A087WWA1 95 aa2.1□□□□□ -2.07
BRCA1-206ENST00000461574 PDE6GP18545 87 aa2.1□□□□□ -2.07
BRCA1-206ENST00000461574 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
BRCA1-206ENST00000461574 C14orf132Q9NPU4 83 aa2.1□□□□□ -2.07
BRCA1-206ENST00000461574 ATXN8Q156A1 80 aa2.09□□□□□ -2.07
BRCA1-206ENST00000461574 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
BRCA1-206ENST00000461574 H3BPC8 53 aa2.08□□□□□ -2.08
BRCA1-206ENST00000461574 MT-ATP8P03928 68 aa2.08□□□□□ -2.08
BRCA1-206ENST00000461574 MT1XP80297 61 aa2.08□□□□□ -2.08
BRCA1-206ENST00000461574 COX7CP15954 63 aa2.07□□□□□ -2.08
BRCA1-206ENST00000461574 ATP5EP56381 51 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-206ENST00000461574 K7EP34 96 aa2.06□□□□□ -2.08
BRCA1-206ENST00000461574 ROMO1P60602 79 aa2.06□□□□□ -2.08
BRCA1-206ENST00000461574 Q8N9L7 120 aa2.06□□□□□ -2.08
BRCA1-206ENST00000461574 A0A1B0GU33 70 aa2.05□□□□□ -2.08
BRCA1-206ENST00000461574 F8W1H4 67 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms