RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 LRBAP50851 2863 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 H3BUX3 64 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 PRUNE2Q8WUY3 3088 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 RELNP78509 3460 aa0.42□□□□□ -2.34
CCDC58-202ENST00000460810 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
CCDC58-202ENST00000460810 DNAH12Q6ZR08 3092 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 C5orf42Q9H799 3197 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 DNAH8Q96JB1 4490 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 LAMA5O15230 3695 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 DOPEY1Q5JWR5 2465 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 A0A096LNI7 61 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 SPRR2BP35325 72 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 DEFB110Q30KQ9 67 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 FRYLO94915 3013 aa0.41□□□□□ -2.34
CCDC58-202ENST00000460810 DYNC2H1Q8NCM8 4307 aaKnown RBP0.4□□□□□ -2.35
CCDC58-202ENST00000460810 STATHP02808 62 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 HTN1P15515 57 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 DEFB136Q30KP8 78 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 RHPN1-AS1Q9BWJ2 59 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 TEX15Q9BXT5 2789 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 AKAP9Q99996 3911 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 ADGRG4Q8IZF6 3080 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 MXRA5Q9NR99 2828 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 MDN1Q9NU22 5596 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 DNAH3Q8TD57 4116 aa0.4□□□□□ -2.35
CCDC58-202ENST00000460810 WDR87Q6ZQQ6 2873 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 HECTD4Q9Y4D8 3996 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
CCDC58-202ENST00000460810 KRTAP8-1Q8IUC2 63 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 DNAH7Q8WXX0 4024 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 PKHD1L1Q86WI1 4243 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 LPAP08519 4548 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 TRIOO75962 3097 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 COL6A3P12111 3177 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 CSMD1Q96PZ7 3565 aa0.39□□□□□ -2.35
CCDC58-202ENST00000460810 MUC5BQ9HC84 5762 aaPredicted RBP0.38□□□□□ -2.35
CCDC58-202ENST00000460810 CFAP46Q8IYW2 2715 aa0.38□□□□□ -2.35
CCDC58-202ENST00000460810 HTTP42858 3142 aa0.38□□□□□ -2.35
CCDC58-202ENST00000460810 ANK3Q12955 4377 aaKnown RBP0.38□□□□□ -2.35
CCDC58-202ENST00000460810 SPTAN1Q13813 2472 aaKnown RBP0.38□□□□□ -2.35
CCDC58-202ENST00000460810 ITPR2Q14571 2701 aa0.38□□□□□ -2.35
CCDC58-202ENST00000460810 FLNAP21333 2647 aaKnown RBP0.38□□□□□ -2.35
CCDC58-202ENST00000460810 SMG1Q96Q15 3661 aaKnown RBP0.38□□□□□ -2.35
CCDC58-202ENST00000460810 DNAH2Q9P225 4427 aa0.38□□□□□ -2.35
CCDC58-202ENST00000460810 PKD1P98161 4303 aa0.38□□□□□ -2.35
CCDC58-202ENST00000460810 MKI67P46013 3256 aaKnown RBP0.37□□□□□ -2.35
CCDC58-202ENST00000460810 HSPG2P98160 4391 aa0.37□□□□□ -2.35
CCDC58-202ENST00000460810 TGP01266 2768 aa0.37□□□□□ -2.35
CCDC58-202ENST00000460810 FLGP20930 4061 aaPredicted RBP0.37□□□□□ -2.35
CCDC58-202ENST00000460810 IGSF10Q6WRI0 2623 aa0.37□□□□□ -2.35
CCDC58-202ENST00000460810 LAMA3Q16787 3333 aa0.37□□□□□ -2.35
CCDC58-202ENST00000460810 NIPBLQ6KC79 2804 aaeCLIP0.37□□□□□ -2.35
CCDC58-202ENST00000460810 SZT2Q5T011 3432 aa0.36□□□□□ -2.35
CCDC58-202ENST00000460810 DNAH9Q9NYC9 4486 aa0.36□□□□□ -2.35
CCDC58-202ENST00000460810 MAP1AP78559 2803 aaPredicted RBP0.36□□□□□ -2.35
CCDC58-202ENST00000460810 DEFB124Q8NES8 71 aa0.36□□□□□ -2.35
CCDC58-202ENST00000460810 NBEAL1Q6ZS30 2694 aa0.36□□□□□ -2.35
CCDC58-202ENST00000460810 SVEP1Q4LDE5 3571 aa0.36□□□□□ -2.35
CCDC58-202ENST00000460810 MGAM2Q2M2H8 2515 aa0.35□□□□□ -2.35
CCDC58-202ENST00000460810 FAT3Q8TDW7 4589 aa0.35□□□□□ -2.35
CCDC58-202ENST00000460810 DMDP11532 3685 aa0.35□□□□□ -2.35
CCDC58-202ENST00000460810 SMR3BP02814 79 aaPredicted RBP0.35□□□□□ -2.35
CCDC58-202ENST00000460810 SPRR2AP35326 72 aa0.35□□□□□ -2.35
CCDC58-202ENST00000460810 LAMA1P25391 3075 aa0.34□□□□□ -2.35
CCDC58-202ENST00000460810 DNAH6Q9C0G6 4158 aa0.34□□□□□ -2.35
CCDC58-202ENST00000460810 MT1AP04731 61 aa0.34□□□□□ -2.36
CCDC58-202ENST00000460810 COX14Q96I36 57 aa0.34□□□□□ -2.36
CCDC58-202ENST00000460810 APOBP04114 4563 aaKnown RBP0.34□□□□□ -2.36
CCDC58-202ENST00000460810 BOD1L1Q8NFC6 3051 aa0.34□□□□□ -2.36
CCDC58-202ENST00000460810 FREM2Q5SZK8 3169 aa0.33□□□□□ -2.36
CCDC58-202ENST00000460810 KRTAP6-2Q3LI66 62 aa0.33□□□□□ -2.36
CCDC58-202ENST00000460810 KRTAP19-5Q3LI72 72 aa0.33□□□□□ -2.36
CCDC58-202ENST00000460810 DEFB108BQ8NET1 73 aa0.33□□□□□ -2.36
CCDC58-202ENST00000460810 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 CEP350Q5VT06 3117 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 MUC3AQ02505 3323 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 CEP295Q9C0D2 2601 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 DCHS1Q96JQ0 3298 aa0.32□□□□□ -2.36
CCDC58-202ENST00000460810 PLECQ15149 4684 aaKnown RBP0.31□□□□□ -2.36
CCDC58-202ENST00000460810 STAB2Q8WWQ8 2551 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 A0A096LPF7 62 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 PKHD1P08F94 4074 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 FAT1Q14517 4588 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 CENPEQ02224 2701 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 TLN1Q9Y490 2541 aaKnown RBP0.31□□□□□ -2.36
CCDC58-202ENST00000460810 DNAH1Q9P2D7 4330 aa0.31□□□□□ -2.36
CCDC58-202ENST00000460810 CSMD2Q7Z408 3487 aa0.3□□□□□ -2.36
CCDC58-202ENST00000460810 TRRAPQ9Y4A5 3859 aa0.3□□□□□ -2.36
CCDC58-202ENST00000460810 DEFB133Q30KQ1 61 aa0.3□□□□□ -2.36
CCDC58-202ENST00000460810 WDFY4Q6ZS81 3184 aa0.3□□□□□ -2.36
CCDC58-202ENST00000460810 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
CCDC58-202ENST00000460810 CMYA5Q8N3K9 4069 aa0.29□□□□□ -2.36
CCDC58-202ENST00000460810 VPS13CQ709C8 3753 aa0.29□□□□□ -2.36
CCDC58-202ENST00000460810 XIRP2A4UGR9 3374 aa0.29□□□□□ -2.36
CCDC58-202ENST00000460810 LINC01556Q5JQF7 62 aa0.29□□□□□ -2.36
CCDC58-202ENST00000460810 LAMA2P24043 3122 aaKnown RBP0.28□□□□□ -2.36
CCDC58-202ENST00000460810 RPS29P62273 56 aaKnown RBP0.28□□□□□ -2.36
CCDC58-202ENST00000460810 SPRR2FQ96RM1 72 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms