RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 KRTDAPP60985 99 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 ZNF56Q15929 161 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 TMEM170BQ5T4T1 132 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 SPANXN1Q5VSR9 72 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 SPTSSBQ8NFR3 76 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 CDC42SE1Q9NRR8 79 aa0.77□□□□□ -2.29
RFC4-211ENST00000460408 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 TRBV7-3A0A075B6L6 115 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 TRBV25-1A0A075B6N4 114 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 GVQW2A0A096LPI5 108 aaPredicted RBP0.76□□□□□ -2.29
RFC4-211ENST00000460408 TRBV6-8A0A0A6YYG3 113 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 F8WEM9 126 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 NDUFC1O43677 76 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 BCE1O60756 84 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 ACYP1P07311 99 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 GCHFRP30047 84 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 MT4P47944 62 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 SERF2P84101 59 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 MIR22HGQ0VDD5 57 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 CSAG1Q6PB30 78 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 SFTA2Q6UW10 78 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 C20orf197Q8N268 126 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 FAM167A-AS1Q96KT0 104 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 OBSCN-AS1Q96MR7 158 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 SMIM7Q9BQ49 75 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 CYP4F30PQ9H0H9 118 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 CDC42SE2Q9NRR3 84 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 NHP2Q9NX24 153 aaKnown RBP0.76□□□□□ -2.29
RFC4-211ENST00000460408 PSENENQ9NZ42 101 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 GNG13Q9P2W3 67 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 ARL2-SNX15V9GYD0 113 aa0.76□□□□□ -2.29
RFC4-211ENST00000460408 TRAV21A0A0B4J279 112 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 TRBV10-3A0A0K0K1G6 114 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 LOC101927531A0A1B0GV80 90 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 FAM74A4Q5TZK3 123 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 Q6JHZ5 121 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 KRTAP8-1Q8IUC2 63 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 IFI27L1Q96BM0 104 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 TMEM167BQ9NRX6 74 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 TMEM14CQ9P0S9 112 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 PRO1854Q9UHT4 67 aa0.75□□□□□ -2.29
RFC4-211ENST00000460408 TRBV10-1A0A0K0K1A3 114 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 MYMXA0A1B0GTQ4 84 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 CHKB-CPT1BH3BT56 60 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 H3BVH4 76 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 SPINK1P00995 79 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 CASC2Q6XLA1 102 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 C14orf132Q9NPU4 83 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 LENEPQ9Y5L5 61 aa0.74□□□□□ -2.29
RFC4-211ENST00000460408 TRBV7-4A0A0J9YYF1 115 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 TRBV6-1A0A0K0K1D8 114 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 INE1O15225 51 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 ERC2-IT1O76042 136 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 Q86TA4 180 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 BAGE3Q86Y29 109 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 BAGE2Q86Y30 109 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 LIMD2Q9BT23 127 aa0.73□□□□□ -2.29
RFC4-211ENST00000460408 A0A087WVE0 104 aa0.72□□□□□ -2.29
RFC4-211ENST00000460408 C9orf92A6NGG3 77 aa0.72□□□□□ -2.29
RFC4-211ENST00000460408 K7EMI3 77 aa0.72□□□□□ -2.29
RFC4-211ENST00000460408 ARMS2P0C7Q2 107 aa0.72□□□□□ -2.29
RFC4-211ENST00000460408 IFI27P40305 119 aaPredicted RBP0.72□□□□□ -2.29
RFC4-211ENST00000460408 V9GYV3 84 aa0.72□□□□□ -2.29
RFC4-211ENST00000460408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.71□□□□□ -2.3
RFC4-211ENST00000460408 TRAV23DV6A0A075B6W5 121 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 LINC00959A0A1B0GUT2 108 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 A0A1B0GUT8 65 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 SMIM27A0A1W2PRY6 76 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 LINC01549A6NIU2 74 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 ZNF815PA8K554 130 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 HIGD1CA8MV81 97 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 LEPROTL1O95214 131 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 MGPP08493 103 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 COX6CP09669 75 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 CRIP1P50238 77 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 RPL37P61927 97 aaKnown RBP0.71□□□□□ -2.3
RFC4-211ENST00000460408 RPS29P62273 56 aaKnown RBP0.71□□□□□ -2.3
RFC4-211ENST00000460408 SPAG11BQ08648 103 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 TMEM254Q8TBM7 123 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 PRR15LQ9BU68 103 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 C6orf48Q9UBA6 75 aa0.71□□□□□ -2.3
RFC4-211ENST00000460408 D6R8Y8 96 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 M0QY20 66 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 PPP1R17O96001 155 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 PLNP26678 52 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 SPINK7P58062 85 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 PRLHP81277 87 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 ATXN8Q156A1 80 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 C2orf82Q6UX34 121 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 SPRR4Q96PI1 79 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 AMELXQ99217 191 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 LINC01558Q9Y6Z2 57 aa0.7□□□□□ -2.3
RFC4-211ENST00000460408 TRBV30A0A0K0K1B3 111 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 LINC01546A6NGU7 62 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 F8VRH5 84 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 NDUFA1O15239 70 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 PDE6GP18545 87 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 FCER1GP30273 86 aa0.69□□□□□ -2.3
RFC4-211ENST00000460408 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms