RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 DNAH5Q8TE73 4624 aa4.9□□□□□ -1.63
AMBRA1-202ENST00000458649 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.63
AMBRA1-202ENST00000458649 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
AMBRA1-202ENST00000458649 VPS13DQ5THJ4 4388 aa4.85□□□□□ -1.63
AMBRA1-202ENST00000458649 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
AMBRA1-202ENST00000458649 DNAH17Q9UFH2 4485 aa4.79□□□□□ -1.64
AMBRA1-202ENST00000458649 DNAH10Q8IVF4 4471 aa4.78□□□□□ -1.64
AMBRA1-202ENST00000458649 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
AMBRA1-202ENST00000458649 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
AMBRA1-202ENST00000458649 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
AMBRA1-202ENST00000458649 PRKDCP78527 4128 aaKnown RBP4.7□□□□□ -1.66
AMBRA1-202ENST00000458649 ANK2Q01484 3957 aa4.68□□□□□ -1.66
AMBRA1-202ENST00000458649 LRP1BQ9NZR2 4599 aa4.68□□□□□ -1.66
AMBRA1-202ENST00000458649 DNAH3Q8TD57 4116 aa4.68□□□□□ -1.66
AMBRA1-202ENST00000458649 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
AMBRA1-202ENST00000458649 FAT1Q14517 4588 aa4.67□□□□□ -1.66
AMBRA1-202ENST00000458649 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
AMBRA1-202ENST00000458649 DYNC2H1Q8NCM8 4307 aaKnown RBP4.62□□□□□ -1.67
AMBRA1-202ENST00000458649 CMYA5Q8N3K9 4069 aa4.61□□□□□ -1.67
AMBRA1-202ENST00000458649 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.68
AMBRA1-202ENST00000458649 DNAH8Q96JB1 4490 aa4.58□□□□□ -1.68
AMBRA1-202ENST00000458649 RYR1P21817 5038 aa4.57□□□□□ -1.68
AMBRA1-202ENST00000458649 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
AMBRA1-202ENST00000458649 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
AMBRA1-202ENST00000458649 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
AMBRA1-202ENST00000458649 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
AMBRA1-202ENST00000458649 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
AMBRA1-202ENST00000458649 SACSQ9NZJ4 4579 aa4.55□□□□□ -1.68
AMBRA1-202ENST00000458649 CRCT1Q9UGL9 99 aa4.51□□□□□ -1.69
AMBRA1-202ENST00000458649 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
AMBRA1-202ENST00000458649 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
AMBRA1-202ENST00000458649 MT1HP80294 61 aa4.49□□□□□ -1.69
AMBRA1-202ENST00000458649 VPS13BQ7Z7G8 4022 aa4.46□□□□□ -1.7
AMBRA1-202ENST00000458649 LYSTQ99698 3801 aa4.45□□□□□ -1.7
AMBRA1-202ENST00000458649 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
AMBRA1-202ENST00000458649 RYR3Q15413 4870 aa4.42□□□□□ -1.7
AMBRA1-202ENST00000458649 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
AMBRA1-202ENST00000458649 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
AMBRA1-202ENST00000458649 MT2AP02795 61 aa4.39□□□□□ -1.71
AMBRA1-202ENST00000458649 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
AMBRA1-202ENST00000458649 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
AMBRA1-202ENST00000458649 HECTD4Q9Y4D8 3996 aa4.35□□□□□ -1.71
AMBRA1-202ENST00000458649 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.71
AMBRA1-202ENST00000458649 RYR2Q92736 4967 aa4.34□□□□□ -1.71
AMBRA1-202ENST00000458649 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
AMBRA1-202ENST00000458649 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
AMBRA1-202ENST00000458649 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
AMBRA1-202ENST00000458649 HYDINQ4G0P3 5121 aa4.28□□□□□ -1.72
AMBRA1-202ENST00000458649 MT1FP04733 61 aa4.25□□□□□ -1.73
AMBRA1-202ENST00000458649 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
AMBRA1-202ENST00000458649 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
AMBRA1-202ENST00000458649 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
AMBRA1-202ENST00000458649 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
AMBRA1-202ENST00000458649 HERC2O95714 4834 aa4.2□□□□□ -1.74
AMBRA1-202ENST00000458649 PKHD1P08F94 4074 aa4.18□□□□□ -1.74
AMBRA1-202ENST00000458649 HSPG2P98160 4391 aa4.15□□□□□ -1.74
AMBRA1-202ENST00000458649 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
AMBRA1-202ENST00000458649 PKD1P98161 4303 aa4.12□□□□□ -1.75
AMBRA1-202ENST00000458649 LRP2P98164 4655 aa4.12□□□□□ -1.75
AMBRA1-202ENST00000458649 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
AMBRA1-202ENST00000458649 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
AMBRA1-202ENST00000458649 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
AMBRA1-202ENST00000458649 SPRR2EP22531 72 aa4.04□□□□□ -1.76
AMBRA1-202ENST00000458649 SPRR2BP35325 72 aa4.04□□□□□ -1.76
AMBRA1-202ENST00000458649 SPRR2AP35326 72 aa4.04□□□□□ -1.76
AMBRA1-202ENST00000458649 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
AMBRA1-202ENST00000458649 HERC1Q15751 4861 aa4.04□□□□□ -1.76
AMBRA1-202ENST00000458649 LCE2CQ5TA81 110 aa4.03□□□□□ -1.77
AMBRA1-202ENST00000458649 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
AMBRA1-202ENST00000458649 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
AMBRA1-202ENST00000458649 PCLOQ9Y6V0 5065 aa3.97□□□□□ -1.77
AMBRA1-202ENST00000458649 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
AMBRA1-202ENST00000458649 MT1BP07438 61 aa3.94□□□□□ -1.78
AMBRA1-202ENST00000458649 SPRR2DP22532 72 aa3.94□□□□□ -1.78
AMBRA1-202ENST00000458649 MT1XP80297 61 aa3.93□□□□□ -1.78
AMBRA1-202ENST00000458649 LPAP08519 4548 aa3.93□□□□□ -1.78
AMBRA1-202ENST00000458649 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
AMBRA1-202ENST00000458649 TNXBP22105 4242 aa3.91□□□□□ -1.78
AMBRA1-202ENST00000458649 LCE2BO14633 110 aa3.91□□□□□ -1.78
AMBRA1-202ENST00000458649 EPPK1P58107 5090 aaKnown RBP3.9□□□□□ -1.79
AMBRA1-202ENST00000458649 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
AMBRA1-202ENST00000458649 ABCA13Q86UQ4 5058 aa3.88□□□□□ -1.79
AMBRA1-202ENST00000458649 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
AMBRA1-202ENST00000458649 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
AMBRA1-202ENST00000458649 MT1GP13640 62 aa3.82□□□□□ -1.8
AMBRA1-202ENST00000458649 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
AMBRA1-202ENST00000458649 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
AMBRA1-202ENST00000458649 KRTAP4-8A0A0G2JLE6 195 aa3.72□□□□□ -1.81
AMBRA1-202ENST00000458649 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
AMBRA1-202ENST00000458649 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
AMBRA1-202ENST00000458649 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
AMBRA1-202ENST00000458649 RNF213Q63HN8 5207 aa3.65□□□□□ -1.83
AMBRA1-202ENST00000458649 KRTAP19-3Q7Z4W3 81 aa3.65□□□□□ -1.83
AMBRA1-202ENST00000458649 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
AMBRA1-202ENST00000458649 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
AMBRA1-202ENST00000458649 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
AMBRA1-202ENST00000458649 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
AMBRA1-202ENST00000458649 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
AMBRA1-202ENST00000458649 HMCN2Q8NDA2 5059 aa3.56□□□□□ -1.84
AMBRA1-202ENST00000458649 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms