RNA–Protein interactions for RNA: ENST00000457566.1

RFX3-AS1-203, RFX3 antisense RNA 1, humanhuman

TSL 3

Gene RFX3-AS1, Length 496 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-203ENST00000457566 COX7BP24311 80 aa1.07□□□□□ -2.24
RFX3-AS1-203ENST00000457566 KRTAP19-6Q3LI70 58 aa1.07□□□□□ -2.24
RFX3-AS1-203ENST00000457566 GAFA1Q96PS6 74 aa1.07□□□□□ -2.24
RFX3-AS1-203ENST00000457566 A0A087WXM4 84 aa1.05□□□□□ -2.24
RFX3-AS1-203ENST00000457566 SMIM31A0A1B0GVY4 71 aa1.05□□□□□ -2.24
RFX3-AS1-203ENST00000457566 HMGA1P17096 107 aaKnown RBP1.05□□□□□ -2.24
RFX3-AS1-203ENST00000457566 HEPN1Q6WQI6 88 aa1.05□□□□□ -2.24
RFX3-AS1-203ENST00000457566 SPTY2D1-AS1A0A0U1RR47 76 aa1.03□□□□□ -2.24
RFX3-AS1-203ENST00000457566 IFI6P09912 130 aa1.03□□□□□ -2.24
RFX3-AS1-203ENST00000457566 RPL38P63173 70 aaKnown RBP1.03□□□□□ -2.24
RFX3-AS1-203ENST00000457566 WFDC9Q8NEX5 89 aa1.03□□□□□ -2.24
RFX3-AS1-203ENST00000457566 CRIPTQ9P021 101 aa1.03□□□□□ -2.24
RFX3-AS1-203ENST00000457566 SMR3BP02814 79 aaPredicted RBP1.02□□□□□ -2.25
RFX3-AS1-203ENST00000457566 COX8AP10176 69 aa1.02□□□□□ -2.25
RFX3-AS1-203ENST00000457566 Q5BKY6 102 aa1.02□□□□□ -2.25
RFX3-AS1-203ENST00000457566 FXYD6-FXYD2A0A087WZ82 144 aa1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 CPSF4LA6NMK7 179 aaKnown RBP1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 SPRR2EP22531 72 aa1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 SPRR2BP35325 72 aa1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 SPRR2AP35326 72 aa1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 Q9Y3F1 56 aa1□□□□□ -2.25
RFX3-AS1-203ENST00000457566 I3L3M4 83 aa0.99□□□□□ -2.25
RFX3-AS1-203ENST00000457566 NREPQ16612 68 aa0.99□□□□□ -2.25
RFX3-AS1-203ENST00000457566 TFF3Q07654 80 aa0.98□□□□□ -2.25
RFX3-AS1-203ENST00000457566 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
RFX3-AS1-203ENST00000457566 SPRR2DP22532 72 aa0.97□□□□□ -2.25
RFX3-AS1-203ENST00000457566 CCL22O00626 93 aa0.96□□□□□ -2.26
RFX3-AS1-203ENST00000457566 STATHP02808 62 aa0.96□□□□□ -2.26
RFX3-AS1-203ENST00000457566 MRPL34Q9BQ48 92 aaKnown RBP0.96□□□□□ -2.26
RFX3-AS1-203ENST00000457566 MUC17Q685J3 4493 aa0.96□□□□□ -2.26
RFX3-AS1-203ENST00000457566 SPRR1AP35321 89 aa0.94□□□□□ -2.26
RFX3-AS1-203ENST00000457566 MT4P47944 62 aa0.94□□□□□ -2.26
RFX3-AS1-203ENST00000457566 SPINK6Q6UWN8 80 aa0.94□□□□□ -2.26
RFX3-AS1-203ENST00000457566 A0A087WWC5 75 aa0.93□□□□□ -2.26
RFX3-AS1-203ENST00000457566 COX6B2Q6YFQ2 88 aa0.93□□□□□ -2.26
RFX3-AS1-203ENST00000457566 DNAH8Q96JB1 4490 aa0.93□□□□□ -2.26
RFX3-AS1-203ENST00000457566 H3BVH4 76 aa0.92□□□□□ -2.26
RFX3-AS1-203ENST00000457566 SPRR1BP22528 89 aa0.92□□□□□ -2.26
RFX3-AS1-203ENST00000457566 CD52P31358 61 aa0.91□□□□□ -2.26
RFX3-AS1-203ENST00000457566 DEFB104AQ8WTQ1 72 aa0.91□□□□□ -2.26
RFX3-AS1-203ENST00000457566 U3KQA8 63 aa0.91□□□□□ -2.26
RFX3-AS1-203ENST00000457566 NDUFA4O00483 81 aa0.9□□□□□ -2.27
RFX3-AS1-203ENST00000457566 MT1HL1P0DM35 61 aa0.9□□□□□ -2.27
RFX3-AS1-203ENST00000457566 ATXN8Q156A1 80 aa0.9□□□□□ -2.27
RFX3-AS1-203ENST00000457566 HILPDAQ9Y5L2 63 aa0.89□□□□□ -2.27
RFX3-AS1-203ENST00000457566 PRH1P02810 166 aa0.88□□□□□ -2.27
RFX3-AS1-203ENST00000457566 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
RFX3-AS1-203ENST00000457566 LYNX1G3V0Z9 82 aa0.86□□□□□ -2.27
RFX3-AS1-203ENST00000457566 SPINK4O60575 86 aa0.85□□□□□ -2.27
RFX3-AS1-203ENST00000457566 MT1HP80294 61 aa0.84□□□□□ -2.27
RFX3-AS1-203ENST00000457566 S100ZQ8WXG8 99 aa0.84□□□□□ -2.27
RFX3-AS1-203ENST00000457566 KCNQ1DNQ9H478 68 aa0.84□□□□□ -2.27
RFX3-AS1-203ENST00000457566 GNG13Q9P2W3 67 aa0.84□□□□□ -2.27
RFX3-AS1-203ENST00000457566 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
RFX3-AS1-203ENST00000457566 PHGR1C9JFL3 82 aa0.83□□□□□ -2.28
RFX3-AS1-203ENST00000457566 H1FX-AS1Q4G0G2 97 aa0.83□□□□□ -2.28
RFX3-AS1-203ENST00000457566 APLNQ9ULZ1 77 aa0.83□□□□□ -2.28
RFX3-AS1-203ENST00000457566 ENHOQ6UWT2 76 aa0.82□□□□□ -2.28
RFX3-AS1-203ENST00000457566 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
RFX3-AS1-203ENST00000457566 FLGP20930 4061 aaPredicted RBP0.82□□□□□ -2.28
RFX3-AS1-203ENST00000457566 DEFB131BA0A096LNP1 70 aa0.81□□□□□ -2.28
RFX3-AS1-203ENST00000457566 C3orf79P0CE67 100 aa0.81□□□□□ -2.28
RFX3-AS1-203ENST00000457566 UBL5Q9BZL1 73 aa0.81□□□□□ -2.28
RFX3-AS1-203ENST00000457566 MRPL33O75394 65 aaKnown RBP0.8□□□□□ -2.28
RFX3-AS1-203ENST00000457566 SPINK1P00995 79 aa0.8□□□□□ -2.28
RFX3-AS1-203ENST00000457566 DEFB114Q30KQ6 69 aa0.79□□□□□ -2.28
RFX3-AS1-203ENST00000457566 NDUFA3O95167 84 aa0.78□□□□□ -2.28
RFX3-AS1-203ENST00000457566 FXYD6Q9H0Q3 95 aa0.78□□□□□ -2.28
RFX3-AS1-203ENST00000457566 DEFB133Q30KQ1 61 aa0.77□□□□□ -2.29
RFX3-AS1-203ENST00000457566 KLK9Q2XQG4 91 aa0.76□□□□□ -2.29
RFX3-AS1-203ENST00000457566 SFTA3P0C7M3 94 aa0.75□□□□□ -2.29
RFX3-AS1-203ENST00000457566 WFDC13Q8IUB5 93 aa0.75□□□□□ -2.29
RFX3-AS1-203ENST00000457566 LINC01549A6NIU2 74 aa0.74□□□□□ -2.29
RFX3-AS1-203ENST00000457566 M0R2T5 61 aa0.74□□□□□ -2.29
RFX3-AS1-203ENST00000457566 ETDCA0A1B0GVM5 59 aa0.73□□□□□ -2.29
RFX3-AS1-203ENST00000457566 DEFB108AA8MXU0 73 aa0.73□□□□□ -2.29
RFX3-AS1-203ENST00000457566 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
RFX3-AS1-203ENST00000457566 LINC00158P58513 81 aa0.7□□□□□ -2.3
RFX3-AS1-203ENST00000457566 KRTAP19-2Q3LHN2 52 aa0.7□□□□□ -2.3
RFX3-AS1-203ENST00000457566 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
RFX3-AS1-203ENST00000457566 H0YAA0 97 aa0.69□□□□□ -2.3
RFX3-AS1-203ENST00000457566 K7EMI3 77 aa0.66□□□□□ -2.3
RFX3-AS1-203ENST00000457566 CRIP1P50238 77 aa0.66□□□□□ -2.3
RFX3-AS1-203ENST00000457566 KRTAP20-2Q3LI61 65 aa0.66□□□□□ -2.3
RFX3-AS1-203ENST00000457566 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
RFX3-AS1-203ENST00000457566 SERF2P84101 59 aa0.62□□□□□ -2.31
RFX3-AS1-203ENST00000457566 MT1FP04733 61 aa0.59□□□□□ -2.31
RFX3-AS1-203ENST00000457566 NMES1Q9C002 83 aa0.59□□□□□ -2.31
RFX3-AS1-203ENST00000457566 MT2AP02795 61 aa0.58□□□□□ -2.32
RFX3-AS1-203ENST00000457566 IAPPP10997 89 aa0.58□□□□□ -2.32
RFX3-AS1-203ENST00000457566 NCBP2-AS2Q69YL0 99 aa0.58□□□□□ -2.32
RFX3-AS1-203ENST00000457566 M0R1W7 72 aa0.55□□□□□ -2.32
RFX3-AS1-203ENST00000457566 PRM1P04553 51 aa0.55□□□□□ -2.32
RFX3-AS1-203ENST00000457566 DEFB130BP0DP73 79 aa0.55□□□□□ -2.32
RFX3-AS1-203ENST00000457566 DEFB130AP0DP74 79 aa0.55□□□□□ -2.32
RFX3-AS1-203ENST00000457566 IGIPA6NJ69 53 aa0.54□□□□□ -2.32
RFX3-AS1-203ENST00000457566 FCER1GP30273 86 aa0.54□□□□□ -2.32
RFX3-AS1-203ENST00000457566 DEFB135Q30KP9 77 aa0.54□□□□□ -2.32
RFX3-AS1-203ENST00000457566 KRTAP8-1Q8IUC2 63 aa0.54□□□□□ -2.32
RFX3-AS1-203ENST00000457566 MINOS1Q5TGZ0 78 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms