RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 C10orf99Q6UWK7 81 aa2.83□□□□□ -1.96
VPS41-209ENST00000457055 DNAH11Q96DT5 4516 aa2.83□□□□□ -1.96
VPS41-209ENST00000457055 PKD1P98161 4303 aa2.82□□□□□ -1.96
VPS41-209ENST00000457055 SRRM2Q9UQ35 2752 aaKnown RBP2.82□□□□□ -1.96
VPS41-209ENST00000457055 DNAH2Q9P225 4427 aa2.82□□□□□ -1.96
VPS41-209ENST00000457055 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
VPS41-209ENST00000457055 C6orf48Q9UBA6 75 aa2.82□□□□□ -1.96
VPS41-209ENST00000457055 DMBT1Q9UGM3 2413 aaPredicted RBP2.81□□□□□ -1.96
VPS41-209ENST00000457055 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
VPS41-209ENST00000457055 PCOTHQ58A44 107 aa2.81□□□□□ -1.96
VPS41-209ENST00000457055 FAT2Q9NYQ8 4349 aa2.81□□□□□ -1.96
VPS41-209ENST00000457055 LEAP2Q969E1 77 aa2.8□□□□□ -1.96
VPS41-209ENST00000457055 I3L2K1 104 aa2.79□□□□□ -1.96
VPS41-209ENST00000457055 WFDC13Q8IUB5 93 aa2.79□□□□□ -1.96
VPS41-209ENST00000457055 MYCBP2O75592 4640 aa2.78□□□□□ -1.96
VPS41-209ENST00000457055 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.96
VPS41-209ENST00000457055 IGKV2-24A0A0C4DH68 120 aa2.78□□□□□ -1.96
VPS41-209ENST00000457055 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
VPS41-209ENST00000457055 Q6ZRN7 208 aaPredicted RBP2.78□□□□□ -1.96
VPS41-209ENST00000457055 APOBP04114 4563 aaKnown RBP2.77□□□□□ -1.97
VPS41-209ENST00000457055 IGLV5-48A0A075B6I7 105 aa2.77□□□□□ -1.97
VPS41-209ENST00000457055 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
VPS41-209ENST00000457055 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
VPS41-209ENST00000457055 DNAH6Q9C0G6 4158 aa2.77□□□□□ -1.97
VPS41-209ENST00000457055 SPINK13Q1W4C9 94 aa2.76□□□□□ -1.97
VPS41-209ENST00000457055 UBE2DNLQ8IWF7 75 aa2.76□□□□□ -1.97
VPS41-209ENST00000457055 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
VPS41-209ENST00000457055 USMG5Q96IX5 58 aa2.75□□□□□ -1.97
VPS41-209ENST00000457055 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
VPS41-209ENST00000457055 M0QY20 66 aa2.74□□□□□ -1.97
VPS41-209ENST00000457055 IGFL1Q6UW32 110 aa2.74□□□□□ -1.97
VPS41-209ENST00000457055 LRP1BQ9NZR2 4599 aa2.73□□□□□ -1.97
VPS41-209ENST00000457055 HMCN2Q8NDA2 5059 aa2.72□□□□□ -1.97
VPS41-209ENST00000457055 H3BUX3 64 aa2.72□□□□□ -1.97
VPS41-209ENST00000457055 H0YAA0 97 aa2.71□□□□□ -1.98
VPS41-209ENST00000457055 PRR9Q5T870 116 aa2.71□□□□□ -1.98
VPS41-209ENST00000457055 TMEM167AQ8TBQ9 72 aa2.71□□□□□ -1.98
VPS41-209ENST00000457055 FAT1Q14517 4588 aa2.7□□□□□ -1.98
VPS41-209ENST00000457055 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
VPS41-209ENST00000457055 RPL37P61927 97 aaKnown RBP2.7□□□□□ -1.98
VPS41-209ENST00000457055 COX6A2Q02221 97 aa2.7□□□□□ -1.98
VPS41-209ENST00000457055 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
VPS41-209ENST00000457055 DEFB131AP59861 70 aa2.68□□□□□ -1.98
VPS41-209ENST00000457055 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
VPS41-209ENST00000457055 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
VPS41-209ENST00000457055 KAAG1Q9UBP8 84 aa2.68□□□□□ -1.98
VPS41-209ENST00000457055 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
VPS41-209ENST00000457055 WT1-ASQ06250 92 aa2.67□□□□□ -1.98
VPS41-209ENST00000457055 DEFB136Q30KP8 78 aa2.67□□□□□ -1.98
VPS41-209ENST00000457055 VPS13BQ7Z7G8 4022 aa2.66□□□□□ -1.98
VPS41-209ENST00000457055 TOMM7Q9P0U1 55 aa2.66□□□□□ -1.98
VPS41-209ENST00000457055 RPL39P5Q59GN2 51 aa2.65□□□□□ -1.99
VPS41-209ENST00000457055 Q6ZSA8 131 aa2.65□□□□□ -1.99
VPS41-209ENST00000457055 MMP24-AS1A0A0U1RRL7 71 aa2.63□□□□□ -1.99
VPS41-209ENST00000457055 H1FX-AS1Q4G0G2 97 aa2.63□□□□□ -1.99
VPS41-209ENST00000457055 K7EIM0 57 aa2.62□□□□□ -1.99
VPS41-209ENST00000457055 DEFB104AQ8WTQ1 72 aa2.62□□□□□ -1.99
VPS41-209ENST00000457055 LRP1Q07954 4544 aaKnown RBP2.62□□□□□ -1.99
VPS41-209ENST00000457055 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
VPS41-209ENST00000457055 LRP2P98164 4655 aa2.61□□□□□ -1.99
VPS41-209ENST00000457055 UNQ6190/PRO20217Q6UXQ8 127 aa2.6□□□□□ -1.99
VPS41-209ENST00000457055 SMR3BP02814 79 aaPredicted RBP2.59□□□□□ -1.99
VPS41-209ENST00000457055 DEFB130BP0DP73 79 aa2.59□□□□□ -1.99
VPS41-209ENST00000457055 DEFB130AP0DP74 79 aa2.59□□□□□ -1.99
VPS41-209ENST00000457055 Q5VSD8 79 aa2.59□□□□□ -1.99
VPS41-209ENST00000457055 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
VPS41-209ENST00000457055 MUC2Q02817 5179 aa2.58□□□□□ -2
VPS41-209ENST00000457055 FAT3Q8TDW7 4589 aa2.58□□□□□ -2
VPS41-209ENST00000457055 PKHD1L1Q86WI1 4243 aa2.57□□□□□ -2
VPS41-209ENST00000457055 A8MTW9 85 aa2.57□□□□□ -2
VPS41-209ENST00000457055 APLNQ9ULZ1 77 aa2.57□□□□□ -2
VPS41-209ENST00000457055 H3BUA1 57 aa2.56□□□□□ -2
VPS41-209ENST00000457055 LELP1Q5T871 98 aa2.56□□□□□ -2
VPS41-209ENST00000457055 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
VPS41-209ENST00000457055 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
VPS41-209ENST00000457055 DEFB105AQ8NG35 78 aa2.53□□□□□ -2
VPS41-209ENST00000457055 CLPSL2Q6UWE3 100 aa2.52□□□□□ -2.01
VPS41-209ENST00000457055 DEFB4AO15263 64 aa2.51□□□□□ -2.01
VPS41-209ENST00000457055 DEFB135Q30KP9 77 aa2.5□□□□□ -2.01
VPS41-209ENST00000457055 TNXBP22105 4242 aa2.5□□□□□ -2.01
VPS41-209ENST00000457055 PRLHP81277 87 aa2.49□□□□□ -2.01
VPS41-209ENST00000457055 LPAP08519 4548 aa2.49□□□□□ -2.01
VPS41-209ENST00000457055 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
VPS41-209ENST00000457055 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
VPS41-209ENST00000457055 PRO0255Q9UI72 69 aa2.46□□□□□ -2.02
VPS41-209ENST00000457055 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
VPS41-209ENST00000457055 SPRR1AP35321 89 aa2.44□□□□□ -2.02
VPS41-209ENST00000457055 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
VPS41-209ENST00000457055 KLK9Q2XQG4 91 aa2.43□□□□□ -2.02
VPS41-209ENST00000457055 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
VPS41-209ENST00000457055 MT1HL1P0DM35 61 aa2.42□□□□□ -2.02
VPS41-209ENST00000457055 APELAP0DMC3 54 aa2.4□□□□□ -2.03
VPS41-209ENST00000457055 KRTAP10-4P60372 401 aaPredicted RBP2.39□□□□□ -2.03
VPS41-209ENST00000457055 S4R3F8 94 aa2.39□□□□□ -2.03
VPS41-209ENST00000457055 SPINK1P00995 79 aa2.38□□□□□ -2.03
VPS41-209ENST00000457055 SPRR1BP22528 89 aa2.38□□□□□ -2.03
VPS41-209ENST00000457055 NOP10Q9NPE3 64 aaKnown RBP2.37□□□□□ -2.03
VPS41-209ENST00000457055 HTN3P15516 51 aa2.36□□□□□ -2.03
VPS41-209ENST00000457055 A0A0D9SG42 100 aa2.27□□□□□ -2.05
VPS41-209ENST00000457055 SPART-AS1P0CW21 52 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms