RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 ALMS1Q8TCU4 4167 aa5.94□□□□□ -1.46
HIPK3-203ENST00000456517 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
HIPK3-203ENST00000456517 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
HIPK3-203ENST00000456517 MT1HP80294 61 aa5.8□□□□□ -1.48
HIPK3-203ENST00000456517 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
HIPK3-203ENST00000456517 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
HIPK3-203ENST00000456517 KRTAP4-1Q9BYQ7 146 aa5.72□□□□□ -1.49
HIPK3-203ENST00000456517 MT2AP02795 61 aa5.69□□□□□ -1.5
HIPK3-203ENST00000456517 BSNQ9UPA5 3926 aa5.67□□□□□ -1.5
HIPK3-203ENST00000456517 DNAH1Q9P2D7 4330 aa5.66□□□□□ -1.5
HIPK3-203ENST00000456517 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
HIPK3-203ENST00000456517 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.52
HIPK3-203ENST00000456517 DNAH9Q9NYC9 4486 aa5.55□□□□□ -1.52
HIPK3-203ENST00000456517 MT1FP04733 61 aa5.55□□□□□ -1.52
HIPK3-203ENST00000456517 AKAP9Q99996 3911 aa5.55□□□□□ -1.52
HIPK3-203ENST00000456517 DNAH5Q8TE73 4624 aa5.55□□□□□ -1.52
HIPK3-203ENST00000456517 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
HIPK3-203ENST00000456517 DNAH10Q8IVF4 4471 aa5.48□□□□□ -1.53
HIPK3-203ENST00000456517 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
HIPK3-203ENST00000456517 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
HIPK3-203ENST00000456517 SPRR2EP22531 72 aa5.45□□□□□ -1.54
HIPK3-203ENST00000456517 SPRR2BP35325 72 aa5.45□□□□□ -1.54
HIPK3-203ENST00000456517 SPRR2AP35326 72 aa5.45□□□□□ -1.54
HIPK3-203ENST00000456517 FAT1Q14517 4588 aa5.39□□□□□ -1.55
HIPK3-203ENST00000456517 ZNF469Q96JG9 3925 aaPredicted RBP5.37□□□□□ -1.55
HIPK3-203ENST00000456517 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.56
HIPK3-203ENST00000456517 DNAH17Q9UFH2 4485 aa5.32□□□□□ -1.56
HIPK3-203ENST00000456517 DNAH11Q96DT5 4516 aa5.32□□□□□ -1.56
HIPK3-203ENST00000456517 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
HIPK3-203ENST00000456517 SPRR2DP22532 72 aa5.28□□□□□ -1.56
HIPK3-203ENST00000456517 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
HIPK3-203ENST00000456517 LCE2BO14633 110 aa5.23□□□□□ -1.57
HIPK3-203ENST00000456517 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
HIPK3-203ENST00000456517 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
HIPK3-203ENST00000456517 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
HIPK3-203ENST00000456517 LRP1BQ9NZR2 4599 aa5.2□□□□□ -1.58
HIPK3-203ENST00000456517 VPS13DQ5THJ4 4388 aa5.17□□□□□ -1.58
HIPK3-203ENST00000456517 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
HIPK3-203ENST00000456517 MT1GP13640 62 aa5.14□□□□□ -1.59
HIPK3-203ENST00000456517 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
HIPK3-203ENST00000456517 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
HIPK3-203ENST00000456517 SACSQ9NZJ4 4579 aa5.12□□□□□ -1.59
HIPK3-203ENST00000456517 ANK2Q01484 3957 aa5.12□□□□□ -1.59
HIPK3-203ENST00000456517 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
HIPK3-203ENST00000456517 DNHD1Q96M86 4753 aa5.09□□□□□ -1.6
HIPK3-203ENST00000456517 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
HIPK3-203ENST00000456517 RYR1P21817 5038 aa5.08□□□□□ -1.6
HIPK3-203ENST00000456517 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
HIPK3-203ENST00000456517 LYSTQ99698 3801 aa5.05□□□□□ -1.6
HIPK3-203ENST00000456517 MT1XP80297 61 aa5.05□□□□□ -1.6
HIPK3-203ENST00000456517 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
HIPK3-203ENST00000456517 DNAH7Q8WXX0 4024 aa4.99□□□□□ -1.61
HIPK3-203ENST00000456517 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
HIPK3-203ENST00000456517 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
HIPK3-203ENST00000456517 KRTAP4-8A0A0G2JLE6 195 aa4.96□□□□□ -1.62
HIPK3-203ENST00000456517 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
HIPK3-203ENST00000456517 APOBP04114 4563 aaKnown RBP4.95□□□□□ -1.62
HIPK3-203ENST00000456517 MT1BP07438 61 aa4.94□□□□□ -1.62
HIPK3-203ENST00000456517 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
HIPK3-203ENST00000456517 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
HIPK3-203ENST00000456517 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
HIPK3-203ENST00000456517 FAT3Q8TDW7 4589 aa4.88□□□□□ -1.63
HIPK3-203ENST00000456517 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
HIPK3-203ENST00000456517 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
HIPK3-203ENST00000456517 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
HIPK3-203ENST00000456517 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
HIPK3-203ENST00000456517 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
HIPK3-203ENST00000456517 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
HIPK3-203ENST00000456517 CMYA5Q8N3K9 4069 aa4.8□□□□□ -1.64
HIPK3-203ENST00000456517 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
HIPK3-203ENST00000456517 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
HIPK3-203ENST00000456517 RYR3Q15413 4870 aa4.78□□□□□ -1.64
HIPK3-203ENST00000456517 MT4P47944 62 aa4.71□□□□□ -1.66
HIPK3-203ENST00000456517 PKD1P98161 4303 aa4.68□□□□□ -1.66
HIPK3-203ENST00000456517 HECTD4Q9Y4D8 3996 aa4.66□□□□□ -1.66
HIPK3-203ENST00000456517 MT1LQ93083 61 aa4.65□□□□□ -1.66
HIPK3-203ENST00000456517 PKHD1L1Q86WI1 4243 aa4.63□□□□□ -1.67
HIPK3-203ENST00000456517 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
HIPK3-203ENST00000456517 MT1EP04732 61 aa4.6□□□□□ -1.67
HIPK3-203ENST00000456517 MT3P25713 68 aa4.59□□□□□ -1.67
HIPK3-203ENST00000456517 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
HIPK3-203ENST00000456517 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
HIPK3-203ENST00000456517 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
HIPK3-203ENST00000456517 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
HIPK3-203ENST00000456517 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
HIPK3-203ENST00000456517 HSPG2P98160 4391 aa4.5□□□□□ -1.69
HIPK3-203ENST00000456517 MT1MQ8N339 61 aa4.5□□□□□ -1.69
HIPK3-203ENST00000456517 PRM1P04553 51 aa4.49□□□□□ -1.69
HIPK3-203ENST00000456517 KIAA1109Q2LD37 5005 aa4.45□□□□□ -1.7
HIPK3-203ENST00000456517 LRP2P98164 4655 aa4.44□□□□□ -1.7
HIPK3-203ENST00000456517 LPAP08519 4548 aa4.43□□□□□ -1.7
HIPK3-203ENST00000456517 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
HIPK3-203ENST00000456517 RYR2Q92736 4967 aa4.42□□□□□ -1.7
HIPK3-203ENST00000456517 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
HIPK3-203ENST00000456517 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
HIPK3-203ENST00000456517 HERC2O95714 4834 aa4.37□□□□□ -1.71
HIPK3-203ENST00000456517 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
HIPK3-203ENST00000456517 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
HIPK3-203ENST00000456517 HERC1Q15751 4861 aa4.35□□□□□ -1.71
HIPK3-203ENST00000456517 KRTAP9-6A0A140TA67 174 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms