RNA–Protein interactions for RNA: ENST00000456224.7

SCN11A-203, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-203ENST00000456224 TENM1Q9UKZ4 2725 aa2.4□□□□□ -2.02
SCN11A-203ENST00000456224 SACSQ9NZJ4 4579 aa2.4□□□□□ -2.02
SCN11A-203ENST00000456224 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
SCN11A-203ENST00000456224 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
SCN11A-203ENST00000456224 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
SCN11A-203ENST00000456224 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
SCN11A-203ENST00000456224 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
SCN11A-203ENST00000456224 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
SCN11A-203ENST00000456224 HECTD4Q9Y4D8 3996 aa2.38□□□□□ -2.03
SCN11A-203ENST00000456224 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
SCN11A-203ENST00000456224 VWFP04275 2813 aa2.36□□□□□ -2.03
SCN11A-203ENST00000456224 FLG2Q5D862 2391 aaPredicted RBP2.36□□□□□ -2.03
SCN11A-203ENST00000456224 C10orf95Q9H7T3 257 aa2.36□□□□□ -2.03
SCN11A-203ENST00000456224 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
SCN11A-203ENST00000456224 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
SCN11A-203ENST00000456224 STAB2Q8WWQ8 2551 aa2.34□□□□□ -2.03
SCN11A-203ENST00000456224 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
SCN11A-203ENST00000456224 LYSTQ99698 3801 aa2.33□□□□□ -2.04
SCN11A-203ENST00000456224 DNAH5Q8TE73 4624 aa2.33□□□□□ -2.04
SCN11A-203ENST00000456224 FRAS1Q86XX4 4008 aa2.32□□□□□ -2.04
SCN11A-203ENST00000456224 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
SCN11A-203ENST00000456224 INE1O15225 51 aa2.31□□□□□ -2.04
SCN11A-203ENST00000456224 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
SCN11A-203ENST00000456224 KRTAP17-1Q9BYP8 105 aa2.27□□□□□ -2.05
SCN11A-203ENST00000456224 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
SCN11A-203ENST00000456224 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
SCN11A-203ENST00000456224 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
SCN11A-203ENST00000456224 TGP01266 2768 aa2.26□□□□□ -2.05
SCN11A-203ENST00000456224 VPS13BQ7Z7G8 4022 aa2.26□□□□□ -2.05
SCN11A-203ENST00000456224 MEGF8Q7Z7M0 2845 aa2.25□□□□□ -2.05
SCN11A-203ENST00000456224 PKHD1P08F94 4074 aa2.25□□□□□ -2.05
SCN11A-203ENST00000456224 PKD1P98161 4303 aa2.24□□□□□ -2.05
SCN11A-203ENST00000456224 DMBT1Q9UGM3 2413 aaPredicted RBP2.24□□□□□ -2.05
SCN11A-203ENST00000456224 FAT1Q14517 4588 aa2.23□□□□□ -2.05
SCN11A-203ENST00000456224 KRTAP4-5Q9BYR2 181 aa2.23□□□□□ -2.05
SCN11A-203ENST00000456224 PKD1L1Q8TDX9 2849 aa2.21□□□□□ -2.06
SCN11A-203ENST00000456224 HSPG2P98160 4391 aa2.19□□□□□ -2.06
SCN11A-203ENST00000456224 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
SCN11A-203ENST00000456224 TNXBP22105 4242 aa2.19□□□□□ -2.06
SCN11A-203ENST00000456224 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
SCN11A-203ENST00000456224 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
SCN11A-203ENST00000456224 DNHD1Q96M86 4753 aa2.16□□□□□ -2.06
SCN11A-203ENST00000456224 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
SCN11A-203ENST00000456224 COL7A1Q02388 2944 aa2.12□□□□□ -2.07
SCN11A-203ENST00000456224 RYR2Q92736 4967 aa2.12□□□□□ -2.07
SCN11A-203ENST00000456224 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
SCN11A-203ENST00000456224 LCE3BQ5TA77 95 aa2.11□□□□□ -2.07
SCN11A-203ENST00000456224 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
SCN11A-203ENST00000456224 SRRM2Q9UQ35 2752 aaKnown RBP2.1□□□□□ -2.07
SCN11A-203ENST00000456224 HERC1Q15751 4861 aa2.1□□□□□ -2.07
SCN11A-203ENST00000456224 MT1HP80294 61 aa2.09□□□□□ -2.07
SCN11A-203ENST00000456224 MYCBP2O75592 4640 aa2.09□□□□□ -2.08
SCN11A-203ENST00000456224 HYDINQ4G0P3 5121 aa2.08□□□□□ -2.08
SCN11A-203ENST00000456224 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
SCN11A-203ENST00000456224 RYR1P21817 5038 aa2.06□□□□□ -2.08
SCN11A-203ENST00000456224 LRP1Q07954 4544 aaKnown RBP2.06□□□□□ -2.08
SCN11A-203ENST00000456224 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
SCN11A-203ENST00000456224 MT2AP02795 61 aa2.04□□□□□ -2.08
SCN11A-203ENST00000456224 RYR3Q15413 4870 aa2.02□□□□□ -2.09
SCN11A-203ENST00000456224 KRTAP19-8Q3LI54 63 aa2□□□□□ -2.09
SCN11A-203ENST00000456224 MT1FP04733 61 aa1.99□□□□□ -2.09
SCN11A-203ENST00000456224 KRTAP19-2Q3LHN2 52 aa1.94□□□□□ -2.1
SCN11A-203ENST00000456224 KRTAP8-1Q8IUC2 63 aa1.94□□□□□ -2.1
SCN11A-203ENST00000456224 KRTAP19-1Q8IUB9 90 aa1.93□□□□□ -2.1
SCN11A-203ENST00000456224 BIRC6Q9NR09 4857 aa1.92□□□□□ -2.1
SCN11A-203ENST00000456224 KRTAP9-6A0A140TA67 174 aa1.92□□□□□ -2.1
SCN11A-203ENST00000456224 KRTAP9-7A8MTY7 169 aa1.92□□□□□ -2.1
SCN11A-203ENST00000456224 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
SCN11A-203ENST00000456224 KRTAP9-8Q9BYQ0 159 aa1.9□□□□□ -2.1
SCN11A-203ENST00000456224 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
SCN11A-203ENST00000456224 KRTAP9-4Q9BYQ2 154 aa1.89□□□□□ -2.11
SCN11A-203ENST00000456224 MT1XP80297 61 aa1.89□□□□□ -2.11
SCN11A-203ENST00000456224 LCE3CQ5T5A8 94 aa1.89□□□□□ -2.11
SCN11A-203ENST00000456224 KRTAP10-5P60370 271 aa1.88□□□□□ -2.11
SCN11A-203ENST00000456224 LCE5AQ5TCM9 118 aa1.88□□□□□ -2.11
SCN11A-203ENST00000456224 MT1BP07438 61 aa1.88□□□□□ -2.11
SCN11A-203ENST00000456224 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
SCN11A-203ENST00000456224 KRTAP9-3Q9BYQ3 159 aa1.87□□□□□ -2.11
SCN11A-203ENST00000456224 LPAP08519 4548 aa1.85□□□□□ -2.11
SCN11A-203ENST00000456224 LCE1DQ5T752 114 aa1.84□□□□□ -2.11
SCN11A-203ENST00000456224 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
SCN11A-203ENST00000456224 HERC2O95714 4834 aa1.83□□□□□ -2.12
SCN11A-203ENST00000456224 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
SCN11A-203ENST00000456224 KRTAP4-8Q9BYQ9 185 aa1.82□□□□□ -2.12
SCN11A-203ENST00000456224 LCE4AQ5TA78 99 aa1.81□□□□□ -2.12
SCN11A-203ENST00000456224 KIAA1109Q2LD37 5005 aa1.8□□□□□ -2.12
SCN11A-203ENST00000456224 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
SCN11A-203ENST00000456224 LOC100996750A0A140TA64 210 aa1.79□□□□□ -2.12
SCN11A-203ENST00000456224 KRTAP4-6Q9BYQ5 205 aa1.79□□□□□ -2.12
SCN11A-203ENST00000456224 LRP2P98164 4655 aa1.78□□□□□ -2.12
SCN11A-203ENST00000456224 PCLOQ9Y6V0 5065 aa1.78□□□□□ -2.12
SCN11A-203ENST00000456224 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
SCN11A-203ENST00000456224 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
SCN11A-203ENST00000456224 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
SCN11A-203ENST00000456224 ABCA13Q86UQ4 5058 aa1.71□□□□□ -2.14
SCN11A-203ENST00000456224 MT1GP13640 62 aa1.71□□□□□ -2.14
SCN11A-203ENST00000456224 KRTAP19-6Q3LI70 58 aa1.71□□□□□ -2.14
SCN11A-203ENST00000456224 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
SCN11A-203ENST00000456224 KRTAP9-2Q9BYQ4 174 aa1.7□□□□□ -2.14
SCN11A-203ENST00000456224 MT1EP04732 61 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms