RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 Q5W150 140 aa2.46□□□□□ -2.02
USP49-205ENST00000448078 LCA10Q71F78 164 aa2.46□□□□□ -2.02
USP49-205ENST00000448078 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
USP49-205ENST00000448078 MRPL34Q9BQ48 92 aaKnown RBP2.46□□□□□ -2.02
USP49-205ENST00000448078 A0A1B0GW54 56 aa2.45□□□□□ -2.02
USP49-205ENST00000448078 K7EQZ3 153 aa2.45□□□□□ -2.02
USP49-205ENST00000448078 TMEM254Q8TBM7 123 aa2.45□□□□□ -2.02
USP49-205ENST00000448078 PRO1854Q9UHT4 67 aa2.45□□□□□ -2.02
USP49-205ENST00000448078 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BKO60814 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BJP06899 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 PDE6GP18545 87 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BOP23527 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BBP33778 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 PSMB2P49721 201 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BDP58876 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BCP62807 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST2H2BEQ16778 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.44□□□□□ -2.02
USP49-205ENST00000448078 Q6ZQT0 140 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BHQ93079 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BNQ99877 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 HIST1H2BMQ99879 126 aa2.44□□□□□ -2.02
USP49-205ENST00000448078 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
USP49-205ENST00000448078 NREPQ16612 68 aa2.42□□□□□ -2.02
USP49-205ENST00000448078 C1orf64Q8NEQ6 169 aa2.41□□□□□ -2.02
USP49-205ENST00000448078 HIST3H2BBQ8N257 126 aa2.4□□□□□ -2.03
USP49-205ENST00000448078 SCGB1C2P0DMR2 95 aa2.39□□□□□ -2.03
USP49-205ENST00000448078 S100A2P29034 98 aa2.39□□□□□ -2.03
USP49-205ENST00000448078 A8MUN3 132 aa2.38□□□□□ -2.03
USP49-205ENST00000448078 JMJD7-PLA2G4BH0Y9G9 81 aa2.38□□□□□ -2.03
USP49-205ENST00000448078 DLEU1O43261 78 aa2.38□□□□□ -2.03
USP49-205ENST00000448078 COX8AP10176 69 aa2.38□□□□□ -2.03
USP49-205ENST00000448078 BAALC-AS2P0C853 105 aa2.37□□□□□ -2.03
USP49-205ENST00000448078 HIGD1BQ9P298 99 aa2.37□□□□□ -2.03
USP49-205ENST00000448078 MMP24-AS1A0A0U1RRL7 71 aa2.36□□□□□ -2.03
USP49-205ENST00000448078 PCP4L1A6NKN8 68 aa2.36□□□□□ -2.03
USP49-205ENST00000448078 HIST1H2BLQ99880 126 aa2.36□□□□□ -2.03
USP49-205ENST00000448078 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
USP49-205ENST00000448078 HCG22E2RYF7 251 aa2.34□□□□□ -2.03
USP49-205ENST00000448078 NDUFC1O43677 76 aa2.34□□□□□ -2.03
USP49-205ENST00000448078 MT1XP80297 61 aa2.34□□□□□ -2.03
USP49-205ENST00000448078 CASC2Q6XLA1 102 aa2.34□□□□□ -2.03
USP49-205ENST00000448078 NAA38Q9BRA0 125 aaKnown RBP2.34□□□□□ -2.03
USP49-205ENST00000448078 LOC110117498A0A087WWA1 95 aa2.33□□□□□ -2.04
USP49-205ENST00000448078 BPY2O14599 106 aa2.33□□□□□ -2.04
USP49-205ENST00000448078 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
USP49-205ENST00000448078 VAMP8Q9BV40 100 aa2.32□□□□□ -2.04
USP49-205ENST00000448078 H0YAA0 97 aa2.31□□□□□ -2.04
USP49-205ENST00000448078 S100A1P23297 94 aa2.31□□□□□ -2.04
USP49-205ENST00000448078 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
USP49-205ENST00000448078 R4GN34 69 aa2.31□□□□□ -2.04
USP49-205ENST00000448078 S100A6P06703 90 aa2.3□□□□□ -2.04
USP49-205ENST00000448078 ATXN8Q156A1 80 aa2.3□□□□□ -2.04
USP49-205ENST00000448078 ADM2Q7Z4H4 148 aa2.29□□□□□ -2.04
USP49-205ENST00000448078 FXYD2P54710 66 aa2.28□□□□□ -2.04
USP49-205ENST00000448078 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
USP49-205ENST00000448078 TP53AIP1Q9HCN2 124 aa2.28□□□□□ -2.04
USP49-205ENST00000448078 HSD52Q0P140 79 aa2.26□□□□□ -2.05
USP49-205ENST00000448078 C14orf132Q9NPU4 83 aa2.26□□□□□ -2.05
USP49-205ENST00000448078 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
USP49-205ENST00000448078 ACYP1P07311 99 aa2.25□□□□□ -2.05
USP49-205ENST00000448078 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
USP49-205ENST00000448078 K7ERJ3 54 aa2.24□□□□□ -2.05
USP49-205ENST00000448078 M0QZ58 72 aa2.24□□□□□ -2.05
USP49-205ENST00000448078 MT4P47944 62 aa2.24□□□□□ -2.05
USP49-205ENST00000448078 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
USP49-205ENST00000448078 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
USP49-205ENST00000448078 TSTD3H0UI37 97 aa2.22□□□□□ -2.05
USP49-205ENST00000448078 BATFQ16520 125 aa2.22□□□□□ -2.05
USP49-205ENST00000448078 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
USP49-205ENST00000448078 CYP4F30PQ9H0H9 118 aa2.22□□□□□ -2.05
USP49-205ENST00000448078 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
USP49-205ENST00000448078 MT-ATP8P03928 68 aa2.2□□□□□ -2.06
USP49-205ENST00000448078 SEC61GP60059 68 aa2.2□□□□□ -2.06
USP49-205ENST00000448078 LOC101927531A0A1B0GV80 90 aa2.19□□□□□ -2.06
USP49-205ENST00000448078 SPINT4Q6UDR6 99 aa2.19□□□□□ -2.06
USP49-205ENST00000448078 CYSTM1Q9H1C7 97 aa2.19□□□□□ -2.06
USP49-205ENST00000448078 A0A087WVE0 104 aa2.18□□□□□ -2.06
USP49-205ENST00000448078 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
USP49-205ENST00000448078 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
USP49-205ENST00000448078 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
USP49-205ENST00000448078 MT1GP13640 62 aa2.15□□□□□ -2.07
USP49-205ENST00000448078 UQCR10Q9UDW1 63 aa2.15□□□□□ -2.07
USP49-205ENST00000448078 K7EP34 96 aa2.13□□□□□ -2.07
USP49-205ENST00000448078 ATOX1O00244 68 aa2.13□□□□□ -2.07
USP49-205ENST00000448078 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
USP49-205ENST00000448078 P0C880 135 aa2.13□□□□□ -2.07
USP49-205ENST00000448078 H3BT86 120 aa2.12□□□□□ -2.07
USP49-205ENST00000448078 M0R143 59 aa2.12□□□□□ -2.07
USP49-205ENST00000448078 MT1EP04732 61 aa2.1□□□□□ -2.07
USP49-205ENST00000448078 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
USP49-205ENST00000448078 A0A1W2PPM0 123 aa2.08□□□□□ -2.08
USP49-205ENST00000448078 UQCRQO14949 82 aa2.08□□□□□ -2.08
USP49-205ENST00000448078 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
USP49-205ENST00000448078 KRTAP19-7Q3SYF9 63 aa2.07□□□□□ -2.08
USP49-205ENST00000448078 SPCS1Q9Y6A9 102 aa2.07□□□□□ -2.08
USP49-205ENST00000448078 H0Y9P7 68 aa2.06□□□□□ -2.08
USP49-205ENST00000448078 SPTSSBQ8NFR3 76 aa2.06□□□□□ -2.08
USP49-205ENST00000448078 TAX1BP3O14907 124 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms