RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 KRTAP3-3Q9BYR6 98 aa3.16□□□□□ -1.9
CDK12-202ENST00000447079 ANK2Q01484 3957 aa3.16□□□□□ -1.9
CDK12-202ENST00000447079 DNAH9Q9NYC9 4486 aa3.15□□□□□ -1.91
CDK12-202ENST00000447079 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
CDK12-202ENST00000447079 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
CDK12-202ENST00000447079 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
CDK12-202ENST00000447079 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
CDK12-202ENST00000447079 KRTAP4-5Q9BYR2 181 aa3.09□□□□□ -1.92
CDK12-202ENST00000447079 HECTD4Q9Y4D8 3996 aa3.06□□□□□ -1.92
CDK12-202ENST00000447079 DNAH2Q9P225 4427 aa3.05□□□□□ -1.92
CDK12-202ENST00000447079 KMT2AQ03164 3969 aa3.04□□□□□ -1.92
CDK12-202ENST00000447079 VPS13BQ7Z7G8 4022 aa3.03□□□□□ -1.93
CDK12-202ENST00000447079 DYNC2H1Q8NCM8 4307 aaKnown RBP3.01□□□□□ -1.93
CDK12-202ENST00000447079 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CDK12-202ENST00000447079 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
CDK12-202ENST00000447079 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
CDK12-202ENST00000447079 LYSTQ99698 3801 aa3.01□□□□□ -1.93
CDK12-202ENST00000447079 PRKDCP78527 4128 aaKnown RBP3□□□□□ -1.93
CDK12-202ENST00000447079 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
CDK12-202ENST00000447079 CRCT1Q9UGL9 99 aa2.94□□□□□ -1.94
CDK12-202ENST00000447079 DNAH17Q9UFH2 4485 aa2.93□□□□□ -1.94
CDK12-202ENST00000447079 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
CDK12-202ENST00000447079 DNAH10Q8IVF4 4471 aa2.92□□□□□ -1.94
CDK12-202ENST00000447079 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
CDK12-202ENST00000447079 FRAS1Q86XX4 4008 aa2.92□□□□□ -1.94
CDK12-202ENST00000447079 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
CDK12-202ENST00000447079 SPRR2GQ9BYE4 73 aa2.9□□□□□ -1.95
CDK12-202ENST00000447079 STARD9Q9P2P6 4700 aa2.89□□□□□ -1.95
CDK12-202ENST00000447079 MT1HP80294 61 aa2.89□□□□□ -1.95
CDK12-202ENST00000447079 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
CDK12-202ENST00000447079 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
CDK12-202ENST00000447079 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
CDK12-202ENST00000447079 KRTAP4-1Q9BYQ7 146 aa2.83□□□□□ -1.96
CDK12-202ENST00000447079 DNAH8Q96JB1 4490 aa2.82□□□□□ -1.96
CDK12-202ENST00000447079 MT2AP02795 61 aa2.81□□□□□ -1.96
CDK12-202ENST00000447079 LRP1BQ9NZR2 4599 aa2.8□□□□□ -1.96
CDK12-202ENST00000447079 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
CDK12-202ENST00000447079 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
CDK12-202ENST00000447079 MT1FP04733 61 aa2.73□□□□□ -1.97
CDK12-202ENST00000447079 PKHD1L1Q86WI1 4243 aa2.71□□□□□ -1.98
CDK12-202ENST00000447079 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
CDK12-202ENST00000447079 PKHD1P08F94 4074 aa2.69□□□□□ -1.98
CDK12-202ENST00000447079 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
CDK12-202ENST00000447079 SACSQ9NZJ4 4579 aa2.68□□□□□ -1.98
CDK12-202ENST00000447079 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
CDK12-202ENST00000447079 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
CDK12-202ENST00000447079 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
CDK12-202ENST00000447079 PCLOQ9Y6V0 5065 aa2.65□□□□□ -1.98
CDK12-202ENST00000447079 FLGP20930 4061 aaPredicted RBP2.64□□□□□ -1.99
CDK12-202ENST00000447079 DNHD1Q96M86 4753 aa2.6□□□□□ -1.99
CDK12-202ENST00000447079 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
CDK12-202ENST00000447079 PKD1P98161 4303 aa2.59□□□□□ -1.99
CDK12-202ENST00000447079 APOBP04114 4563 aaKnown RBP2.59□□□□□ -1.99
CDK12-202ENST00000447079 TNXBP22105 4242 aa2.59□□□□□ -1.99
CDK12-202ENST00000447079 FAT3Q8TDW7 4589 aa2.59□□□□□ -1.99
CDK12-202ENST00000447079 HSPG2P98160 4391 aa2.59□□□□□ -1.99
CDK12-202ENST00000447079 FAT1Q14517 4588 aa2.59□□□□□ -2
CDK12-202ENST00000447079 LRP1Q07954 4544 aaKnown RBP2.58□□□□□ -2
CDK12-202ENST00000447079 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
CDK12-202ENST00000447079 MT3P25713 68 aa2.54□□□□□ -2
CDK12-202ENST00000447079 MT1XP80297 61 aa2.54□□□□□ -2
CDK12-202ENST00000447079 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
CDK12-202ENST00000447079 SPRR2EP22531 72 aa2.53□□□□□ -2
CDK12-202ENST00000447079 SPRR2BP35325 72 aa2.53□□□□□ -2
CDK12-202ENST00000447079 SPRR2AP35326 72 aa2.53□□□□□ -2
CDK12-202ENST00000447079 KRTAP17-1Q9BYP8 105 aa2.5□□□□□ -2.01
CDK12-202ENST00000447079 MT1BP07438 61 aa2.49□□□□□ -2.01
CDK12-202ENST00000447079 LCE2BO14633 110 aa2.48□□□□□ -2.01
CDK12-202ENST00000447079 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
CDK12-202ENST00000447079 LCE2CQ5TA81 110 aa2.48□□□□□ -2.01
CDK12-202ENST00000447079 RYR3Q15413 4870 aa2.47□□□□□ -2.01
CDK12-202ENST00000447079 MT1GP13640 62 aa2.47□□□□□ -2.01
CDK12-202ENST00000447079 SPRR2DP22532 72 aa2.47□□□□□ -2.01
CDK12-202ENST00000447079 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
CDK12-202ENST00000447079 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
CDK12-202ENST00000447079 HYDINQ4G0P3 5121 aa2.42□□□□□ -2.02
CDK12-202ENST00000447079 RYR2Q92736 4967 aa2.41□□□□□ -2.02
CDK12-202ENST00000447079 MUC17Q685J3 4493 aa2.39□□□□□ -2.03
CDK12-202ENST00000447079 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
CDK12-202ENST00000447079 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
CDK12-202ENST00000447079 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
CDK12-202ENST00000447079 MT1LQ93083 61 aa2.36□□□□□ -2.03
CDK12-202ENST00000447079 KRTAP19-6Q3LI70 58 aa2.33□□□□□ -2.04
CDK12-202ENST00000447079 LPAP08519 4548 aa2.32□□□□□ -2.04
CDK12-202ENST00000447079 KRTAP4-8A0A0G2JLE6 195 aa2.31□□□□□ -2.04
CDK12-202ENST00000447079 KRTAP4-8Q9BYQ9 185 aa2.31□□□□□ -2.04
CDK12-202ENST00000447079 LRP2P98164 4655 aa2.31□□□□□ -2.04
CDK12-202ENST00000447079 MT1EP04732 61 aa2.31□□□□□ -2.04
CDK12-202ENST00000447079 LCE2DQ5TA82 110 aaPredicted RBP2.3□□□□□ -2.04
CDK12-202ENST00000447079 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
CDK12-202ENST00000447079 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
CDK12-202ENST00000447079 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
CDK12-202ENST00000447079 HERC2O95714 4834 aa2.23□□□□□ -2.05
CDK12-202ENST00000447079 MT1MQ8N339 61 aa2.23□□□□□ -2.05
CDK12-202ENST00000447079 LCE2AQ5TA79 106 aaPredicted RBP2.22□□□□□ -2.05
CDK12-202ENST00000447079 KIAA1109Q2LD37 5005 aa2.21□□□□□ -2.06
CDK12-202ENST00000447079 HERC1Q15751 4861 aa2.21□□□□□ -2.06
CDK12-202ENST00000447079 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
CDK12-202ENST00000447079 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
CDK12-202ENST00000447079 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms