RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 COX14Q96I36 57 aa1.64□□□□□ -2.15
UBR3-206ENST00000444475 COL7A1Q02388 2944 aa1.64□□□□□ -2.15
UBR3-206ENST00000444475 LINC01590Q5TEZ4 76 aa1.63□□□□□ -2.15
UBR3-206ENST00000444475 RPS27P42677 84 aaKnown RBP1.63□□□□□ -2.15
UBR3-206ENST00000444475 POLR2KP53803 58 aaKnown RBP1.63□□□□□ -2.15
UBR3-206ENST00000444475 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
UBR3-206ENST00000444475 HSPG2P98160 4391 aa1.63□□□□□ -2.15
UBR3-206ENST00000444475 KRTAP10-7P60409 375 aaPredicted RBP1.63□□□□□ -2.15
UBR3-206ENST00000444475 FLG2Q5D862 2391 aaPredicted RBP1.62□□□□□ -2.15
UBR3-206ENST00000444475 MUC2Q02817 5179 aa1.62□□□□□ -2.15
UBR3-206ENST00000444475 USMG5Q96IX5 58 aa1.62□□□□□ -2.15
UBR3-206ENST00000444475 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
UBR3-206ENST00000444475 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
UBR3-206ENST00000444475 IGLV5-48A0A075B6I7 105 aa1.62□□□□□ -2.15
UBR3-206ENST00000444475 C6orf48Q9UBA6 75 aa1.62□□□□□ -2.15
UBR3-206ENST00000444475 AKAP6Q13023 2319 aa1.61□□□□□ -2.15
UBR3-206ENST00000444475 MINOS1Q5TGZ0 78 aa1.61□□□□□ -2.15
UBR3-206ENST00000444475 CNTRLQ7Z7A1 2325 aa1.61□□□□□ -2.15
UBR3-206ENST00000444475 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
UBR3-206ENST00000444475 BRD3OSQ6XYD6 125 aa1.6□□□□□ -2.15
UBR3-206ENST00000444475 STARD9Q9P2P6 4700 aa1.6□□□□□ -2.15
UBR3-206ENST00000444475 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
UBR3-206ENST00000444475 CCL22O00626 93 aa1.59□□□□□ -2.15
UBR3-206ENST00000444475 FRAS1Q86XX4 4008 aa1.59□□□□□ -2.16
UBR3-206ENST00000444475 VPS13DQ5THJ4 4388 aa1.59□□□□□ -2.16
UBR3-206ENST00000444475 SPRR1AP35321 89 aa1.58□□□□□ -2.16
UBR3-206ENST00000444475 DEFB130BP0DP73 79 aa1.58□□□□□ -2.16
UBR3-206ENST00000444475 DEFB130AP0DP74 79 aa1.58□□□□□ -2.16
UBR3-206ENST00000444475 KRTAP12-4P60329 112 aa1.58□□□□□ -2.16
UBR3-206ENST00000444475 RNF213Q63HN8 5207 aa1.58□□□□□ -2.16
UBR3-206ENST00000444475 DMBT1Q9UGM3 2413 aaPredicted RBP1.57□□□□□ -2.16
UBR3-206ENST00000444475 RPL39P62891 51 aaKnown RBP1.57□□□□□ -2.16
UBR3-206ENST00000444475 H1FX-AS1Q4G0G2 97 aa1.57□□□□□ -2.16
UBR3-206ENST00000444475 PLCE1Q9P212 2302 aa1.57□□□□□ -2.16
UBR3-206ENST00000444475 PIGYQ3MUY2 71 aa1.57□□□□□ -2.16
UBR3-206ENST00000444475 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
UBR3-206ENST00000444475 TTTY10Q9BZA0 68 aa1.56□□□□□ -2.16
UBR3-206ENST00000444475 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
UBR3-206ENST00000444475 CSMD3Q7Z407 3707 aa1.56□□□□□ -2.16
UBR3-206ENST00000444475 STAB2Q8WWQ8 2551 aa1.55□□□□□ -2.16
UBR3-206ENST00000444475 PKD1P98161 4303 aa1.54□□□□□ -2.16
UBR3-206ENST00000444475 Q5VSD8 79 aa1.54□□□□□ -2.16
UBR3-206ENST00000444475 RPL39LQ96EH5 51 aaKnown RBP1.54□□□□□ -2.16
UBR3-206ENST00000444475 APOBP04114 4563 aaKnown RBP1.53□□□□□ -2.16
UBR3-206ENST00000444475 WFDC13Q8IUB5 93 aa1.52□□□□□ -2.17
UBR3-206ENST00000444475 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
UBR3-206ENST00000444475 MMP24-AS1A0A0U1RRL7 71 aa1.51□□□□□ -2.17
UBR3-206ENST00000444475 WT1-ASQ06250 92 aa1.51□□□□□ -2.17
UBR3-206ENST00000444475 WFDC10BQ8IUB3 73 aa1.51□□□□□ -2.17
UBR3-206ENST00000444475 KRTAP13-1Q8IUC0 172 aa1.51□□□□□ -2.17
UBR3-206ENST00000444475 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
UBR3-206ENST00000444475 SRRM2Q9UQ35 2752 aaKnown RBP1.49□□□□□ -2.17
UBR3-206ENST00000444475 KRTAP10-5P60370 271 aa1.49□□□□□ -2.17
UBR3-206ENST00000444475 FAT1Q14517 4588 aa1.49□□□□□ -2.17
UBR3-206ENST00000444475 TNXBP22105 4242 aa1.48□□□□□ -2.17
UBR3-206ENST00000444475 PRO0255Q9UI72 69 aa1.48□□□□□ -2.17
UBR3-206ENST00000444475 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 DEFB110Q30KQ9 67 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 DEFB106AQ8N104 65 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 DEFB104AQ8WTQ1 72 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
UBR3-206ENST00000444475 KAAG1Q9UBP8 84 aa1.46□□□□□ -2.18
UBR3-206ENST00000444475 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
UBR3-206ENST00000444475 SPRR1BP22528 89 aa1.46□□□□□ -2.18
UBR3-206ENST00000444475 H0YGG7 62 aa1.45□□□□□ -2.18
UBR3-206ENST00000444475 KRTAP20-1Q3LI63 56 aa1.45□□□□□ -2.18
UBR3-206ENST00000444475 A0A0D9SG42 100 aa1.45□□□□□ -2.18
UBR3-206ENST00000444475 H3BSH0 61 aa1.45□□□□□ -2.18
UBR3-206ENST00000444475 DEFB131AP59861 70 aa1.44□□□□□ -2.18
UBR3-206ENST00000444475 LEAP2Q969E1 77 aa1.44□□□□□ -2.18
UBR3-206ENST00000444475 M0QY20 66 aa1.44□□□□□ -2.18
UBR3-206ENST00000444475 WNK2Q9Y3S1 2297 aa1.44□□□□□ -2.18
UBR3-206ENST00000444475 CLPSL2Q6UWE3 100 aa1.44□□□□□ -2.18
UBR3-206ENST00000444475 PRCDQ00LT1 54 aa1.43□□□□□ -2.18
UBR3-206ENST00000444475 SPINK9Q5DT21 86 aa1.43□□□□□ -2.18
UBR3-206ENST00000444475 DNAH8Q96JB1 4490 aa1.42□□□□□ -2.18
UBR3-206ENST00000444475 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
UBR3-206ENST00000444475 S4R3F8 94 aa1.42□□□□□ -2.18
UBR3-206ENST00000444475 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
UBR3-206ENST00000444475 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
UBR3-206ENST00000444475 NEBP20929 6669 aa1.39□□□□□ -2.19
UBR3-206ENST00000444475 A8MTW9 85 aa1.39□□□□□ -2.19
UBR3-206ENST00000444475 MUC17Q685J3 4493 aa1.39□□□□□ -2.19
UBR3-206ENST00000444475 KLK9Q2XQG4 91 aa1.39□□□□□ -2.19
UBR3-206ENST00000444475 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
UBR3-206ENST00000444475 H3BUA1 57 aa1.37□□□□□ -2.19
UBR3-206ENST00000444475 MT1HL1P0DM35 61 aa1.37□□□□□ -2.19
UBR3-206ENST00000444475 KRTAP2-3P0C7H8 128 aa1.36□□□□□ -2.19
UBR3-206ENST00000444475 KRTAP2-4Q9BYR9 128 aa1.36□□□□□ -2.19
UBR3-206ENST00000444475 LRP2P98164 4655 aa1.36□□□□□ -2.19
UBR3-206ENST00000444475 H3BUX3 64 aa1.34□□□□□ -2.2
UBR3-206ENST00000444475 PRLHP81277 87 aa1.32□□□□□ -2.2
UBR3-206ENST00000444475 USH2AO75445 5202 aa1.32□□□□□ -2.2
UBR3-206ENST00000444475 K7EIM0 57 aa1.3□□□□□ -2.2
UBR3-206ENST00000444475 KRTAP12-3P60328 96 aa1.28□□□□□ -2.2
UBR3-206ENST00000444475 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
UBR3-206ENST00000444475 TMEM167AQ8TBQ9 72 aa1.27□□□□□ -2.21
UBR3-206ENST00000444475 SMR3BP02814 79 aaPredicted RBP1.26□□□□□ -2.21
UBR3-206ENST00000444475 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms