RNA–Protein interactions for RNA: ENST00000439415.1

CBX1P4-201, Transcript of chromobox 1 pseudogene 4, humanhuman

BASIC

Gene CBX1P4, Length 457 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P4-201ENST00000439415 CRIP1P50238 77 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 COX17Q14061 63 aa1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 LRP1Q07954 4544 aaKnown RBP1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 SRRM2Q9UQ35 2752 aaKnown RBP1.91□□□□□ -2.1
CBX1P4-201ENST00000439415 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
CBX1P4-201ENST00000439415 DEFB108BQ8NET1 73 aa1.9□□□□□ -2.11
CBX1P4-201ENST00000439415 Q6ZQY7 126 aa1.89□□□□□ -2.11
CBX1P4-201ENST00000439415 SMIM11BQ8TCY0 68 aa1.89□□□□□ -2.11
CBX1P4-201ENST00000439415 LINC00158P58513 81 aa1.88□□□□□ -2.11
CBX1P4-201ENST00000439415 LY6G6CO95867 125 aa1.87□□□□□ -2.11
CBX1P4-201ENST00000439415 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
CBX1P4-201ENST00000439415 TNXBP22105 4242 aa1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 DEFB131BA0A096LNP1 70 aa1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 RPS27P42677 84 aaKnown RBP1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 PRB3Q04118 309 aaPredicted RBP1.86□□□□□ -2.11
CBX1P4-201ENST00000439415 ACYP2P14621 99 aa1.85□□□□□ -2.11
CBX1P4-201ENST00000439415 FLG2Q5D862 2391 aaPredicted RBP1.85□□□□□ -2.11
CBX1P4-201ENST00000439415 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 G3V318 75 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 LINC00575Q6W349 94 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
CBX1P4-201ENST00000439415 POLR2KP53803 58 aaKnown RBP1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 SPINK9Q5DT21 86 aa1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 Q8IZM0 81 aa1.83□□□□□ -2.12
CBX1P4-201ENST00000439415 SORL1Q92673 2214 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 RPL39P62891 51 aaKnown RBP1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 SSBP3-AS1Q7Z2R9 100 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 LPAP08519 4548 aa1.82□□□□□ -2.12
CBX1P4-201ENST00000439415 MRPL33O75394 65 aaKnown RBP1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 PIGYQ3MUY2 71 aa1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 C10orf99Q6UWK7 81 aa1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 RPL39LQ96EH5 51 aaKnown RBP1.81□□□□□ -2.12
CBX1P4-201ENST00000439415 I3L2K1 104 aa1.79□□□□□ -2.12
CBX1P4-201ENST00000439415 ANGP03950 147 aaKnown RBP1.79□□□□□ -2.12
CBX1P4-201ENST00000439415 PRCDQ00LT1 54 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 Q6ZRX8 168 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 CRIPTQ9P021 101 aa1.78□□□□□ -2.12
CBX1P4-201ENST00000439415 GVQW2A0A096LPI5 108 aaPredicted RBP1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 H3BUX3 64 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 K7EQZ3 153 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 KRTAP12-4P60329 112 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
CBX1P4-201ENST00000439415 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 LEAP2Q969E1 77 aa1.76□□□□□ -2.13
CBX1P4-201ENST00000439415 DEFB136Q30KP8 78 aa1.75□□□□□ -2.13
CBX1P4-201ENST00000439415 LELP1Q5T871 98 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 Q5VSD8 79 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 Q6ZSA8 131 aa1.74□□□□□ -2.13
CBX1P4-201ENST00000439415 H0YAA0 97 aa1.73□□□□□ -2.13
CBX1P4-201ENST00000439415 SPINK13Q1W4C9 94 aa1.73□□□□□ -2.13
CBX1P4-201ENST00000439415 IGLV5-48A0A075B6I7 105 aa1.72□□□□□ -2.13
CBX1P4-201ENST00000439415 WFDC13Q8IUB5 93 aa1.72□□□□□ -2.13
CBX1P4-201ENST00000439415 COX6A2Q02221 97 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 TP53AIP1Q9HCN2 124 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 C6orf48Q9UBA6 75 aa1.71□□□□□ -2.14
CBX1P4-201ENST00000439415 M0QY20 66 aa1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 SMR3BP02814 79 aaPredicted RBP1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 MINOS1Q5TGZ0 78 aa1.7□□□□□ -2.14
CBX1P4-201ENST00000439415 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 APLNQ9ULZ1 77 aa1.69□□□□□ -2.14
CBX1P4-201ENST00000439415 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 WFDC10BQ8IUB3 73 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 MRPL34Q9BQ48 92 aaKnown RBP1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
CBX1P4-201ENST00000439415 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
CBX1P4-201ENST00000439415 RPL39P5Q59GN2 51 aa1.67□□□□□ -2.14
CBX1P4-201ENST00000439415 MUC17Q685J3 4493 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 TMEM167AQ8TBQ9 72 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
CBX1P4-201ENST00000439415 MMP24-AS1A0A0U1RRL7 71 aa1.65□□□□□ -2.15
CBX1P4-201ENST00000439415 COX6B2Q6YFQ2 88 aa1.64□□□□□ -2.15
CBX1P4-201ENST00000439415 KAAG1Q9UBP8 84 aa1.64□□□□□ -2.15
CBX1P4-201ENST00000439415 A8MTW9 85 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 APELAP0DMC3 54 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB135Q30KP9 77 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
CBX1P4-201ENST00000439415 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB4AO15263 64 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 UBE2DNLQ8IWF7 75 aa1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CBX1P4-201ENST00000439415 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
CBX1P4-201ENST00000439415 USH2AO75445 5202 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 K7EIM0 57 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
CBX1P4-201ENST00000439415 DEFB131AP59861 70 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 CLPSL2Q6UWE3 100 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 TOMM7Q9P0U1 55 aa1.59□□□□□ -2.15
CBX1P4-201ENST00000439415 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.16
CBX1P4-201ENST00000439415 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CBX1P4-201ENST00000439415 NEBP20929 6669 aa1.55□□□□□ -2.16
CBX1P4-201ENST00000439415 MUC12Q9UKN1 5478 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms