RNA–Protein interactions for RNA: ENST00000436760.1

KPNA3-202, Transcript of karyopherin subunit alpha 3, humanhuman

TSL 2

Gene KPNA3, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-202ENST00000436760 DNAH3Q8TD57 4116 aa1.26□□□□□ -2.21
KPNA3-202ENST00000436760 ARHGAP5-AS1Q96IT6 56 aa1.26□□□□□ -2.21
KPNA3-202ENST00000436760 DNAH9Q9NYC9 4486 aa1.26□□□□□ -2.21
KPNA3-202ENST00000436760 WNK1Q9H4A3 2382 aa1.26□□□□□ -2.21
KPNA3-202ENST00000436760 DEFB108BQ8NET1 73 aa1.25□□□□□ -2.21
KPNA3-202ENST00000436760 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
KPNA3-202ENST00000436760 DYNC2H1Q8NCM8 4307 aaKnown RBP1.25□□□□□ -2.21
KPNA3-202ENST00000436760 STARD9Q9P2P6 4700 aa1.25□□□□□ -2.21
KPNA3-202ENST00000436760 HUWE1Q7Z6Z7 4374 aaKnown RBP1.24□□□□□ -2.21
KPNA3-202ENST00000436760 CSMD3Q7Z407 3707 aa1.24□□□□□ -2.21
KPNA3-202ENST00000436760 HYDINQ4G0P3 5121 aa1.24□□□□□ -2.21
KPNA3-202ENST00000436760 SACSQ9NZJ4 4579 aa1.24□□□□□ -2.21
KPNA3-202ENST00000436760 WNK2Q9Y3S1 2297 aa1.24□□□□□ -2.21
KPNA3-202ENST00000436760 BIRC6Q9NR09 4857 aa1.24□□□□□ -2.21
KPNA3-202ENST00000436760 ALMS1Q8TCU4 4167 aa1.23□□□□□ -2.21
KPNA3-202ENST00000436760 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
KPNA3-202ENST00000436760 LINC01590Q5TEZ4 76 aa1.23□□□□□ -2.21
KPNA3-202ENST00000436760 MINOS1Q5TGZ0 78 aa1.23□□□□□ -2.21
KPNA3-202ENST00000436760 C6orf48Q9UBA6 75 aa1.23□□□□□ -2.21
KPNA3-202ENST00000436760 TENM3Q9P273 2699 aa1.23□□□□□ -2.21
KPNA3-202ENST00000436760 LYSTQ99698 3801 aa1.22□□□□□ -2.21
KPNA3-202ENST00000436760 LEAP2Q969E1 77 aa1.22□□□□□ -2.21
KPNA3-202ENST00000436760 PLECQ15149 4684 aaKnown RBP1.22□□□□□ -2.21
KPNA3-202ENST00000436760 DNAH7Q8WXX0 4024 aa1.22□□□□□ -2.21
KPNA3-202ENST00000436760 FRAS1Q86XX4 4008 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 STAB2Q8WWQ8 2551 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 COL7A1Q02388 2944 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 PCLOQ9Y6V0 5065 aa1.21□□□□□ -2.22
KPNA3-202ENST00000436760 DNAH1Q9P2D7 4330 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 IGLV5-48A0A075B6I7 105 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 A0A0D9SG42 100 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 DEFB136Q30KP8 78 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 LELP1Q5T871 98 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 APLNQ9ULZ1 77 aa1.2□□□□□ -2.22
KPNA3-202ENST00000436760 H3BUX3 64 aa1.19□□□□□ -2.22
KPNA3-202ENST00000436760 RYR1P21817 5038 aa1.19□□□□□ -2.22
KPNA3-202ENST00000436760 DNAH10Q8IVF4 4471 aa1.19□□□□□ -2.22
KPNA3-202ENST00000436760 HERC2O95714 4834 aa1.18□□□□□ -2.22
KPNA3-202ENST00000436760 DNAH2Q9P225 4427 aa1.18□□□□□ -2.22
KPNA3-202ENST00000436760 APELAP0DMC3 54 aa1.18□□□□□ -2.22
KPNA3-202ENST00000436760 RPL39P62891 51 aaKnown RBP1.18□□□□□ -2.22
KPNA3-202ENST00000436760 KIAA1109Q2LD37 5005 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 VPS13DQ5THJ4 4388 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 DEFB130BP0DP73 79 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 DEFB130AP0DP74 79 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 H1FX-AS1Q4G0G2 97 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 KMT2AQ03164 3969 aa1.17□□□□□ -2.22
KPNA3-202ENST00000436760 HECTD4Q9Y4D8 3996 aa1.16□□□□□ -2.22
KPNA3-202ENST00000436760 DYNC1H1Q14204 4646 aaKnown RBP1.16□□□□□ -2.22
KPNA3-202ENST00000436760 FAT2Q9NYQ8 4349 aa1.16□□□□□ -2.22
KPNA3-202ENST00000436760 Q5VSD8 79 aa1.16□□□□□ -2.22
KPNA3-202ENST00000436760 RPL39LQ96EH5 51 aaKnown RBP1.16□□□□□ -2.22
KPNA3-202ENST00000436760 PKHD1P08F94 4074 aa1.15□□□□□ -2.22
KPNA3-202ENST00000436760 SPRR1AP35321 89 aa1.15□□□□□ -2.23
KPNA3-202ENST00000436760 RPL39P5Q59GN2 51 aa1.15□□□□□ -2.23
KPNA3-202ENST00000436760 WFDC10BQ8IUB3 73 aa1.15□□□□□ -2.23
KPNA3-202ENST00000436760 DNAH11Q96DT5 4516 aa1.15□□□□□ -2.23
KPNA3-202ENST00000436760 DNAH5Q8TE73 4624 aa1.14□□□□□ -2.23
KPNA3-202ENST00000436760 DEFB4AO15263 64 aa1.14□□□□□ -2.23
KPNA3-202ENST00000436760 HERC1Q15751 4861 aa1.14□□□□□ -2.23
KPNA3-202ENST00000436760 MMP24-AS1A0A0U1RRL7 71 aa1.13□□□□□ -2.23
KPNA3-202ENST00000436760 SPRR1BP22528 89 aa1.13□□□□□ -2.23
KPNA3-202ENST00000436760 DEFB131AP59861 70 aa1.13□□□□□ -2.23
KPNA3-202ENST00000436760 DEFB1P60022 68 aa1.13□□□□□ -2.23
KPNA3-202ENST00000436760 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
KPNA3-202ENST00000436760 DNAH6Q9C0G6 4158 aa1.13□□□□□ -2.23
KPNA3-202ENST00000436760 LRP1BQ9NZR2 4599 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 PKD1P98161 4303 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 WT1-ASQ06250 92 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 KAAG1Q9UBP8 84 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 DNAH17Q9UFH2 4485 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 HSPG2P98160 4391 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 FAT1Q14517 4588 aa1.12□□□□□ -2.23
KPNA3-202ENST00000436760 PRCDQ00LT1 54 aa1.11□□□□□ -2.23
KPNA3-202ENST00000436760 UBR4Q5T4S7 5183 aa1.11□□□□□ -2.23
KPNA3-202ENST00000436760 MYCBP2O75592 4640 aa1.11□□□□□ -2.23
KPNA3-202ENST00000436760 M0QY20 66 aa1.1□□□□□ -2.23
KPNA3-202ENST00000436760 KLK9Q2XQG4 91 aa1.1□□□□□ -2.23
KPNA3-202ENST00000436760 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
KPNA3-202ENST00000436760 H3BUA1 57 aa1.08□□□□□ -2.24
KPNA3-202ENST00000436760 HTN3P15516 51 aa1.08□□□□□ -2.24
KPNA3-202ENST00000436760 VPS13BQ7Z7G8 4022 aa1.08□□□□□ -2.24
KPNA3-202ENST00000436760 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
KPNA3-202ENST00000436760 CLPSL2Q6UWE3 100 aa1.07□□□□□ -2.24
KPNA3-202ENST00000436760 DNAH8Q96JB1 4490 aa1.07□□□□□ -2.24
KPNA3-202ENST00000436760 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
KPNA3-202ENST00000436760 A0A096LPF7 62 aa1.06□□□□□ -2.24
KPNA3-202ENST00000436760 K7EIM0 57 aa1.06□□□□□ -2.24
KPNA3-202ENST00000436760 HTN1P15515 57 aa1.06□□□□□ -2.24
KPNA3-202ENST00000436760 RHPN1-AS1Q9BWJ2 59 aa1.06□□□□□ -2.24
KPNA3-202ENST00000436760 S4R3F8 94 aa1.06□□□□□ -2.24
KPNA3-202ENST00000436760 TMEM167AQ8TBQ9 72 aa1.05□□□□□ -2.24
KPNA3-202ENST00000436760 DEFB104AQ8WTQ1 72 aa1.05□□□□□ -2.24
KPNA3-202ENST00000436760 SRRM2Q9UQ35 2752 aaKnown RBP1.05□□□□□ -2.24
KPNA3-202ENST00000436760 FAT3Q8TDW7 4589 aa1.04□□□□□ -2.24
KPNA3-202ENST00000436760 DMBT1Q9UGM3 2413 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms