RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
HDAC8-213ENST00000436675 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
HDAC8-213ENST00000436675 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
HDAC8-213ENST00000436675 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.42
HDAC8-213ENST00000436675 A8MUN3 132 aa6.11□□□□□ -1.43
HDAC8-213ENST00000436675 TSTD3H0UI37 97 aa6.11□□□□□ -1.43
HDAC8-213ENST00000436675 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
HDAC8-213ENST00000436675 M0R143 59 aa6.1□□□□□ -1.43
HDAC8-213ENST00000436675 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
HDAC8-213ENST00000436675 H3BT86 120 aa6.06□□□□□ -1.44
HDAC8-213ENST00000436675 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
HDAC8-213ENST00000436675 H0YAA0 97 aa6.03□□□□□ -1.44
HDAC8-213ENST00000436675 CYP4F30PQ9H0H9 118 aa6.03□□□□□ -1.44
HDAC8-213ENST00000436675 K7EP34 96 aa6.02□□□□□ -1.45
HDAC8-213ENST00000436675 NDUFC1O43677 76 aa6.02□□□□□ -1.45
HDAC8-213ENST00000436675 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
HDAC8-213ENST00000436675 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
HDAC8-213ENST00000436675 BATFQ16520 125 aa5.98□□□□□ -1.45
HDAC8-213ENST00000436675 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
HDAC8-213ENST00000436675 KRTAP10-7P60409 375 aaPredicted RBP5.95□□□□□ -1.46
HDAC8-213ENST00000436675 R4GN34 69 aa5.91□□□□□ -1.46
HDAC8-213ENST00000436675 A0A1W2PPM0 123 aa5.9□□□□□ -1.46
HDAC8-213ENST00000436675 C9orf118A6NHY6 69 aa5.9□□□□□ -1.46
HDAC8-213ENST00000436675 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
HDAC8-213ENST00000436675 LOC101927531A0A1B0GV80 90 aa5.89□□□□□ -1.47
HDAC8-213ENST00000436675 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
HDAC8-213ENST00000436675 M0QZ58 72 aa5.87□□□□□ -1.47
HDAC8-213ENST00000436675 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
HDAC8-213ENST00000436675 P0C880 135 aa5.86□□□□□ -1.47
HDAC8-213ENST00000436675 LINC01554Q52M75 96 aa5.86□□□□□ -1.47
HDAC8-213ENST00000436675 TAX1BP3O14907 124 aa5.85□□□□□ -1.47
HDAC8-213ENST00000436675 SPCS1Q9Y6A9 102 aa5.85□□□□□ -1.47
HDAC8-213ENST00000436675 ACYP1P07311 99 aa5.84□□□□□ -1.47
HDAC8-213ENST00000436675 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
HDAC8-213ENST00000436675 H0Y9P7 68 aa5.75□□□□□ -1.49
HDAC8-213ENST00000436675 PRO0461Q9UI25 63 aa5.71□□□□□ -1.5
HDAC8-213ENST00000436675 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
HDAC8-213ENST00000436675 ATOX1O00244 68 aa5.68□□□□□ -1.5
HDAC8-213ENST00000436675 UQCRQO14949 82 aa5.68□□□□□ -1.5
HDAC8-213ENST00000436675 SMIM6P0DI80 62 aa5.66□□□□□ -1.5
HDAC8-213ENST00000436675 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
HDAC8-213ENST00000436675 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.5
HDAC8-213ENST00000436675 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
HDAC8-213ENST00000436675 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
HDAC8-213ENST00000436675 H3BS24 57 aa5.62□□□□□ -1.51
HDAC8-213ENST00000436675 MT-ATP8P03928 68 aa5.6□□□□□ -1.51
HDAC8-213ENST00000436675 MT4P47944 62 aa5.58□□□□□ -1.52
HDAC8-213ENST00000436675 HIST1H4AP62805 103 aaKnown RBP5.58□□□□□ -1.52
HDAC8-213ENST00000436675 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
HDAC8-213ENST00000436675 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
HDAC8-213ENST00000436675 ETDBQ3ZM63 59 aa5.54□□□□□ -1.52
HDAC8-213ENST00000436675 MT1EP04732 61 aa5.53□□□□□ -1.52
HDAC8-213ENST00000436675 CYSTM1Q9H1C7 97 aa5.5□□□□□ -1.53
HDAC8-213ENST00000436675 MP68P56378 58 aa5.48□□□□□ -1.53
HDAC8-213ENST00000436675 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
HDAC8-213ENST00000436675 COL5A1-AS1Q5SY13 56 aa5.46□□□□□ -1.54
HDAC8-213ENST00000436675 KRTAP5-10Q6L8G5 202 aa5.46□□□□□ -1.54
HDAC8-213ENST00000436675 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
HDAC8-213ENST00000436675 ATP5EP2Q5VTU8 51 aa5.44□□□□□ -1.54
HDAC8-213ENST00000436675 F8W1H4 67 aa5.43□□□□□ -1.54
HDAC8-213ENST00000436675 GTF2H5Q6ZYL4 71 aa5.41□□□□□ -1.54
HDAC8-213ENST00000436675 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
HDAC8-213ENST00000436675 OCR1Q9BZK8 76 aa5.39□□□□□ -1.55
HDAC8-213ENST00000436675 MT1GP13640 62 aa5.38□□□□□ -1.55
HDAC8-213ENST00000436675 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
HDAC8-213ENST00000436675 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
HDAC8-213ENST00000436675 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
HDAC8-213ENST00000436675 TRAV7A0A075B6U4 112 aa5.32□□□□□ -1.56
HDAC8-213ENST00000436675 MT1MQ8N339 61 aa5.32□□□□□ -1.56
HDAC8-213ENST00000436675 FAM240AA0A1B0GVK7 77 aa5.3□□□□□ -1.56
HDAC8-213ENST00000436675 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
HDAC8-213ENST00000436675 PCP4P48539 62 aa5.29□□□□□ -1.56
HDAC8-213ENST00000436675 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
HDAC8-213ENST00000436675 H3BPC8 53 aa5.28□□□□□ -1.56
HDAC8-213ENST00000436675 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
HDAC8-213ENST00000436675 A0A0D9SG42 100 aa5.27□□□□□ -1.57
HDAC8-213ENST00000436675 LOC105371267A0A1B0GV96 52 aa5.27□□□□□ -1.57
HDAC8-213ENST00000436675 SPTSSBQ8NFR3 76 aa5.27□□□□□ -1.57
HDAC8-213ENST00000436675 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
HDAC8-213ENST00000436675 ACYP2P14621 99 aa5.25□□□□□ -1.57
HDAC8-213ENST00000436675 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
HDAC8-213ENST00000436675 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
HDAC8-213ENST00000436675 MT1LQ93083 61 aa5.21□□□□□ -1.58
HDAC8-213ENST00000436675 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
HDAC8-213ENST00000436675 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
HDAC8-213ENST00000436675 SCGB1A1P11684 91 aa5.13□□□□□ -1.59
HDAC8-213ENST00000436675 KRTAP20-2Q3LI61 65 aa5.06□□□□□ -1.6
HDAC8-213ENST00000436675 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
HDAC8-213ENST00000436675 PCP4L1A6NKN8 68 aa5.03□□□□□ -1.6
HDAC8-213ENST00000436675 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
HDAC8-213ENST00000436675 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
HDAC8-213ENST00000436675 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
HDAC8-213ENST00000436675 SPATA8Q6RVD6 105 aa4.98□□□□□ -1.61
HDAC8-213ENST00000436675 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
HDAC8-213ENST00000436675 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
HDAC8-213ENST00000436675 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
HDAC8-213ENST00000436675 SNURFQ9Y675 71 aa4.89□□□□□ -1.63
HDAC8-213ENST00000436675 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
HDAC8-213ENST00000436675 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
HDAC8-213ENST00000436675 SERP1Q9Y6X1 66 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms