RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 COL6A5A8TX70 2615 aa3.16□□□□□ -1.9
VRK2-206ENST00000435505 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.9
VRK2-206ENST00000435505 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.9
VRK2-206ENST00000435505 KMT2AQ03164 3969 aa3.15□□□□□ -1.91
VRK2-206ENST00000435505 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
VRK2-206ENST00000435505 UBE2DNLQ8IWF7 75 aa3.13□□□□□ -1.91
VRK2-206ENST00000435505 FBN3Q75N90 2809 aa3.12□□□□□ -1.91
VRK2-206ENST00000435505 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
VRK2-206ENST00000435505 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
VRK2-206ENST00000435505 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
VRK2-206ENST00000435505 Q6ZRN7 208 aaPredicted RBP3.1□□□□□ -1.91
VRK2-206ENST00000435505 DMBT1Q9UGM3 2413 aaPredicted RBP3.09□□□□□ -1.91
VRK2-206ENST00000435505 APLNQ9ULZ1 77 aa3.09□□□□□ -1.91
VRK2-206ENST00000435505 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.92
VRK2-206ENST00000435505 PRKDCP78527 4128 aaKnown RBP3.08□□□□□ -1.92
VRK2-206ENST00000435505 DYNC2H1Q8NCM8 4307 aaKnown RBP3.08□□□□□ -1.92
VRK2-206ENST00000435505 S4R3F8 94 aa3.08□□□□□ -1.92
VRK2-206ENST00000435505 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
VRK2-206ENST00000435505 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
VRK2-206ENST00000435505 DNAH6Q9C0G6 4158 aa3.07□□□□□ -1.92
VRK2-206ENST00000435505 DNAH2Q9P225 4427 aa3.06□□□□□ -1.92
VRK2-206ENST00000435505 MT3P25713 68 aa3.06□□□□□ -1.92
VRK2-206ENST00000435505 PLECQ15149 4684 aaKnown RBP3.06□□□□□ -1.92
VRK2-206ENST00000435505 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
VRK2-206ENST00000435505 DNAH11Q96DT5 4516 aa3.04□□□□□ -1.92
VRK2-206ENST00000435505 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
VRK2-206ENST00000435505 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
VRK2-206ENST00000435505 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
VRK2-206ENST00000435505 STAB1Q9NY15 2570 aa3.01□□□□□ -1.93
VRK2-206ENST00000435505 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
VRK2-206ENST00000435505 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
VRK2-206ENST00000435505 KRTAP12-1P59990 96 aa3□□□□□ -1.93
VRK2-206ENST00000435505 C9orf92A6NGG3 77 aa3□□□□□ -1.93
VRK2-206ENST00000435505 PLAC4Q8WY50 150 aa3□□□□□ -1.93
VRK2-206ENST00000435505 LRP1BQ9NZR2 4599 aa2.96□□□□□ -1.94
VRK2-206ENST00000435505 DNAH5Q8TE73 4624 aa2.96□□□□□ -1.94
VRK2-206ENST00000435505 STARD9Q9P2P6 4700 aa2.95□□□□□ -1.94
VRK2-206ENST00000435505 LCE3BQ5TA77 95 aa2.93□□□□□ -1.94
VRK2-206ENST00000435505 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
VRK2-206ENST00000435505 VPS13BQ7Z7G8 4022 aa2.92□□□□□ -1.94
VRK2-206ENST00000435505 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
VRK2-206ENST00000435505 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
VRK2-206ENST00000435505 KRTAP10-12P60413 245 aa2.87□□□□□ -1.95
VRK2-206ENST00000435505 SACSQ9NZJ4 4579 aa2.86□□□□□ -1.95
VRK2-206ENST00000435505 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
VRK2-206ENST00000435505 RPS29P62273 56 aaKnown RBP2.86□□□□□ -1.95
VRK2-206ENST00000435505 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
VRK2-206ENST00000435505 PKHD1L1Q86WI1 4243 aa2.85□□□□□ -1.95
VRK2-206ENST00000435505 PKD1P98161 4303 aa2.84□□□□□ -1.95
VRK2-206ENST00000435505 KRTAP10-1P60331 282 aa2.83□□□□□ -1.96
VRK2-206ENST00000435505 M0QZ58 72 aa2.81□□□□□ -1.96
VRK2-206ENST00000435505 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
VRK2-206ENST00000435505 LRP1Q07954 4544 aaKnown RBP2.79□□□□□ -1.96
VRK2-206ENST00000435505 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
VRK2-206ENST00000435505 HSPG2P98160 4391 aa2.78□□□□□ -1.96
VRK2-206ENST00000435505 INE1O15225 51 aa2.77□□□□□ -1.97
VRK2-206ENST00000435505 TNXBP22105 4242 aa2.76□□□□□ -1.97
VRK2-206ENST00000435505 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
VRK2-206ENST00000435505 J3QKU1 62 aa2.74□□□□□ -1.97
VRK2-206ENST00000435505 A0A1B0GVY2 172 aa2.74□□□□□ -1.97
VRK2-206ENST00000435505 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
VRK2-206ENST00000435505 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
VRK2-206ENST00000435505 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
VRK2-206ENST00000435505 FAT3Q8TDW7 4589 aa2.72□□□□□ -1.97
VRK2-206ENST00000435505 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
VRK2-206ENST00000435505 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
VRK2-206ENST00000435505 FAT1Q14517 4588 aa2.68□□□□□ -1.98
VRK2-206ENST00000435505 SMR3BP02814 79 aaPredicted RBP2.66□□□□□ -1.98
VRK2-206ENST00000435505 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.98
VRK2-206ENST00000435505 LPAP08519 4548 aa2.65□□□□□ -1.99
VRK2-206ENST00000435505 KRTAP10-4P60372 401 aaPredicted RBP2.61□□□□□ -1.99
VRK2-206ENST00000435505 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
VRK2-206ENST00000435505 TNP1P09430 55 aa2.54□□□□□ -2
VRK2-206ENST00000435505 KRTAP10-10P60014 251 aa2.53□□□□□ -2
VRK2-206ENST00000435505 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
VRK2-206ENST00000435505 LRP2P98164 4655 aa2.52□□□□□ -2.01
VRK2-206ENST00000435505 Q5VSD8 79 aa2.51□□□□□ -2.01
VRK2-206ENST00000435505 KRTAP6-3Q3LI67 103 aa2.5□□□□□ -2.01
VRK2-206ENST00000435505 KMT2CQ8NEZ4 4911 aaKnown RBP2.5□□□□□ -2.01
VRK2-206ENST00000435505 KRTAP10-7P60409 375 aaPredicted RBP2.5□□□□□ -2.01
VRK2-206ENST00000435505 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
VRK2-206ENST00000435505 KRTAP10-5P60370 271 aa2.44□□□□□ -2.02
VRK2-206ENST00000435505 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
VRK2-206ENST00000435505 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
VRK2-206ENST00000435505 DNHD1Q96M86 4753 aa2.41□□□□□ -2.02
VRK2-206ENST00000435505 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
VRK2-206ENST00000435505 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
VRK2-206ENST00000435505 MT1HL1P0DM35 61 aa2.35□□□□□ -2.03
VRK2-206ENST00000435505 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
VRK2-206ENST00000435505 KRTAP19-2Q3LHN2 52 aa2.32□□□□□ -2.04
VRK2-206ENST00000435505 HERC1Q15751 4861 aa2.32□□□□□ -2.04
VRK2-206ENST00000435505 RYR1P21817 5038 aa2.31□□□□□ -2.04
VRK2-206ENST00000435505 KRTAP8-1Q8IUC2 63 aa2.3□□□□□ -2.04
VRK2-206ENST00000435505 RYR2Q92736 4967 aa2.26□□□□□ -2.05
VRK2-206ENST00000435505 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
VRK2-206ENST00000435505 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
VRK2-206ENST00000435505 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
VRK2-206ENST00000435505 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
VRK2-206ENST00000435505 SPRR2GQ9BYE4 73 aa2.2□□□□□ -2.06
VRK2-206ENST00000435505 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms