RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 C6orf48Q9UBA6 75 aa3.22□□□□□ -1.89
RFC3-202ENST00000434425 FAT3Q8TDW7 4589 aa3.2□□□□□ -1.9
RFC3-202ENST00000434425 RNF213Q63HN8 5207 aa3.2□□□□□ -1.9
RFC3-202ENST00000434425 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
RFC3-202ENST00000434425 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
RFC3-202ENST00000434425 HAMPP81172 84 aa3.19□□□□□ -1.9
RFC3-202ENST00000434425 LINC01556Q5JQF7 62 aa3.19□□□□□ -1.9
RFC3-202ENST00000434425 COX7BP24311 80 aa3.18□□□□□ -1.9
RFC3-202ENST00000434425 LINC00472Q9H8W2 130 aa3.18□□□□□ -1.9
RFC3-202ENST00000434425 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
RFC3-202ENST00000434425 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
RFC3-202ENST00000434425 Q6ZQY7 126 aa3.16□□□□□ -1.9
RFC3-202ENST00000434425 R4GN34 69 aa3.16□□□□□ -1.9
RFC3-202ENST00000434425 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
RFC3-202ENST00000434425 A0A1W2PNN7 141 aa3.15□□□□□ -1.91
RFC3-202ENST00000434425 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.91
RFC3-202ENST00000434425 COA5Q86WW8 74 aa3.14□□□□□ -1.91
RFC3-202ENST00000434425 TNXBP22105 4242 aa3.13□□□□□ -1.91
RFC3-202ENST00000434425 IGKV2D-30A0A075B6S6 120 aa3.13□□□□□ -1.91
RFC3-202ENST00000434425 SPRR1AP35321 89 aa3.13□□□□□ -1.91
RFC3-202ENST00000434425 Q96NJ1 140 aa3.13□□□□□ -1.91
RFC3-202ENST00000434425 LRP2P98164 4655 aa3.12□□□□□ -1.91
RFC3-202ENST00000434425 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
RFC3-202ENST00000434425 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
RFC3-202ENST00000434425 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
RFC3-202ENST00000434425 ETDCA0A1B0GVM5 59 aa3.11□□□□□ -1.91
RFC3-202ENST00000434425 IGKV4-1P06312 121 aa3.11□□□□□ -1.91
RFC3-202ENST00000434425 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
RFC3-202ENST00000434425 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.91
RFC3-202ENST00000434425 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
RFC3-202ENST00000434425 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
RFC3-202ENST00000434425 Q6ZRX8 168 aa3.09□□□□□ -1.91
RFC3-202ENST00000434425 Q6ZSA8 131 aa3.09□□□□□ -1.92
RFC3-202ENST00000434425 KRTAP7-1Q8IUC3 87 aa3.09□□□□□ -1.92
RFC3-202ENST00000434425 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
RFC3-202ENST00000434425 SPACA4Q8TDM5 124 aa3.07□□□□□ -1.92
RFC3-202ENST00000434425 A0A0G2JQZ4 141 aa3.06□□□□□ -1.92
RFC3-202ENST00000434425 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
RFC3-202ENST00000434425 MT1HL1P0DM35 61 aa3.04□□□□□ -1.92
RFC3-202ENST00000434425 SPRR1BP22528 89 aa3.04□□□□□ -1.92
RFC3-202ENST00000434425 C14orf177Q52M58 125 aa3.04□□□□□ -1.92
RFC3-202ENST00000434425 LINC00304Q8N9R0 145 aa3.04□□□□□ -1.92
RFC3-202ENST00000434425 DEFB105AQ8NG35 78 aa3.04□□□□□ -1.92
RFC3-202ENST00000434425 HRES1P13985 223 aa3.03□□□□□ -1.92
RFC3-202ENST00000434425 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
RFC3-202ENST00000434425 LPAP08519 4548 aa3.03□□□□□ -1.92
RFC3-202ENST00000434425 MUC2Q02817 5179 aa3.03□□□□□ -1.92
RFC3-202ENST00000434425 A0A1B0GU69 56 aa3.03□□□□□ -1.93
RFC3-202ENST00000434425 DSCR10P59022 87 aa3.03□□□□□ -1.93
RFC3-202ENST00000434425 A0A096LNI7 61 aa3.02□□□□□ -1.93
RFC3-202ENST00000434425 Q8N9L7 120 aa3.02□□□□□ -1.93
RFC3-202ENST00000434425 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
RFC3-202ENST00000434425 IGFL1Q6UW32 110 aa3.01□□□□□ -1.93
RFC3-202ENST00000434425 KRTAP13-1Q8IUC0 172 aa2.99□□□□□ -1.93
RFC3-202ENST00000434425 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
RFC3-202ENST00000434425 K7EQZ3 153 aa2.97□□□□□ -1.93
RFC3-202ENST00000434425 INE1O15225 51 aa2.97□□□□□ -1.93
RFC3-202ENST00000434425 PRLHP81277 87 aa2.97□□□□□ -1.93
RFC3-202ENST00000434425 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.93
RFC3-202ENST00000434425 ACYP2P14621 99 aa2.96□□□□□ -1.94
RFC3-202ENST00000434425 ANAPC11Q9NYG5 84 aa2.96□□□□□ -1.94
RFC3-202ENST00000434425 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
RFC3-202ENST00000434425 FAT4Q6V0I7 4981 aa2.92□□□□□ -1.94
RFC3-202ENST00000434425 MMP24-AS1A0A0U1RRL7 71 aa2.91□□□□□ -1.94
RFC3-202ENST00000434425 WFDC13Q8IUB5 93 aa2.9□□□□□ -1.94
RFC3-202ENST00000434425 TP53AIP1Q9HCN2 124 aa2.9□□□□□ -1.95
RFC3-202ENST00000434425 SPINK6Q6UWN8 80 aa2.89□□□□□ -1.95
RFC3-202ENST00000434425 SSBP3-AS1Q7Z2R9 100 aa2.87□□□□□ -1.95
RFC3-202ENST00000434425 PLAC4Q8WY50 150 aa2.87□□□□□ -1.95
RFC3-202ENST00000434425 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
RFC3-202ENST00000434425 FSIP2Q5CZC0 6907 aa2.84□□□□□ -1.96
RFC3-202ENST00000434425 KRTAP13-3Q3SY46 172 aa2.83□□□□□ -1.96
RFC3-202ENST00000434425 MUC17Q685J3 4493 aa2.82□□□□□ -1.96
RFC3-202ENST00000434425 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
RFC3-202ENST00000434425 KRTAP12-2P59991 146 aa2.79□□□□□ -1.96
RFC3-202ENST00000434425 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
RFC3-202ENST00000434425 KRTAP13-2Q52LG2 175 aa2.77□□□□□ -1.97
RFC3-202ENST00000434425 PCOTHQ58A44 107 aa2.77□□□□□ -1.97
RFC3-202ENST00000434425 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
RFC3-202ENST00000434425 CRCT1Q9UGL9 99 aa2.74□□□□□ -1.97
RFC3-202ENST00000434425 RPS29P62273 56 aaKnown RBP2.73□□□□□ -1.97
RFC3-202ENST00000434425 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
RFC3-202ENST00000434425 SPINK1P00995 79 aa2.72□□□□□ -1.97
RFC3-202ENST00000434425 CRIPTQ9P021 101 aa2.72□□□□□ -1.97
RFC3-202ENST00000434425 MT3P25713 68 aa2.71□□□□□ -1.97
RFC3-202ENST00000434425 COX6B2Q6YFQ2 88 aa2.71□□□□□ -1.97
RFC3-202ENST00000434425 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
RFC3-202ENST00000434425 H0YAA0 97 aa2.7□□□□□ -1.98
RFC3-202ENST00000434425 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
RFC3-202ENST00000434425 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
RFC3-202ENST00000434425 KRTAP4-1Q9BYQ7 146 aa2.68□□□□□ -1.98
RFC3-202ENST00000434425 RPL37P61927 97 aaKnown RBP2.65□□□□□ -1.98
RFC3-202ENST00000434425 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
RFC3-202ENST00000434425 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
RFC3-202ENST00000434425 MT1HP80294 61 aa2.6□□□□□ -1.99
RFC3-202ENST00000434425 USH2AO75445 5202 aa2.58□□□□□ -2
RFC3-202ENST00000434425 SSPOA2VEC9 5147 aa2.57□□□□□ -2
RFC3-202ENST00000434425 C10orf95Q9H7T3 257 aa2.57□□□□□ -2
RFC3-202ENST00000434425 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
RFC3-202ENST00000434425 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms