RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
CHD8-202ENST00000430710 INE1O15225 51 aa2.99□□□□□ -1.93
CHD8-202ENST00000430710 KRTAP10-6P60371 365 aaPredicted RBP2.98□□□□□ -1.93
CHD8-202ENST00000430710 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
CHD8-202ENST00000430710 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
CHD8-202ENST00000430710 OTOGQ6ZRI0 2925 aa2.94□□□□□ -1.94
CHD8-202ENST00000430710 FBN3Q75N90 2809 aa2.93□□□□□ -1.94
CHD8-202ENST00000430710 FBN1P35555 2871 aaKnown RBP2.93□□□□□ -1.94
CHD8-202ENST00000430710 DNAH1Q9P2D7 4330 aa2.92□□□□□ -1.94
CHD8-202ENST00000430710 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
CHD8-202ENST00000430710 DYNC2H1Q8NCM8 4307 aaKnown RBP2.9□□□□□ -1.95
CHD8-202ENST00000430710 VPS13BQ7Z7G8 4022 aa2.88□□□□□ -1.95
CHD8-202ENST00000430710 DNAH10Q8IVF4 4471 aa2.88□□□□□ -1.95
CHD8-202ENST00000430710 DNAH9Q9NYC9 4486 aa2.86□□□□□ -1.95
CHD8-202ENST00000430710 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
CHD8-202ENST00000430710 KRTAP17-1Q9BYP8 105 aa2.79□□□□□ -1.96
CHD8-202ENST00000430710 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
CHD8-202ENST00000430710 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
CHD8-202ENST00000430710 PKHD1P08F94 4074 aa2.72□□□□□ -1.97
CHD8-202ENST00000430710 KRTAP10-12P60413 245 aa2.72□□□□□ -1.97
CHD8-202ENST00000430710 PKD1P98161 4303 aa2.71□□□□□ -1.98
CHD8-202ENST00000430710 STARD9Q9P2P6 4700 aa2.7□□□□□ -1.98
CHD8-202ENST00000430710 MT1HL1P0DM35 61 aa2.7□□□□□ -1.98
CHD8-202ENST00000430710 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
CHD8-202ENST00000430710 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
CHD8-202ENST00000430710 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
CHD8-202ENST00000430710 KRTAP10-4P60372 401 aaPredicted RBP2.68□□□□□ -1.98
CHD8-202ENST00000430710 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
CHD8-202ENST00000430710 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.98
CHD8-202ENST00000430710 LCE3AQ5TA76 89 aa2.64□□□□□ -1.99
CHD8-202ENST00000430710 DNAH8Q96JB1 4490 aa2.63□□□□□ -1.99
CHD8-202ENST00000430710 DNAH17Q9UFH2 4485 aa2.63□□□□□ -1.99
CHD8-202ENST00000430710 PLECQ15149 4684 aaKnown RBP2.63□□□□□ -1.99
CHD8-202ENST00000430710 HERC1Q15751 4861 aa2.62□□□□□ -1.99
CHD8-202ENST00000430710 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
CHD8-202ENST00000430710 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
CHD8-202ENST00000430710 TNXBP22105 4242 aa2.58□□□□□ -2
CHD8-202ENST00000430710 SPRR2EP22531 72 aa2.58□□□□□ -2
CHD8-202ENST00000430710 SPRR2BP35325 72 aa2.58□□□□□ -2
CHD8-202ENST00000430710 SPRR2AP35326 72 aa2.58□□□□□ -2
CHD8-202ENST00000430710 KRTAP19-4Q3LI73 84 aa2.58□□□□□ -2
CHD8-202ENST00000430710 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
CHD8-202ENST00000430710 DNHD1Q96M86 4753 aa2.56□□□□□ -2
CHD8-202ENST00000430710 DNAH5Q8TE73 4624 aa2.52□□□□□ -2.01
CHD8-202ENST00000430710 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
CHD8-202ENST00000430710 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
CHD8-202ENST00000430710 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
CHD8-202ENST00000430710 MT1HP80294 61 aa2.48□□□□□ -2.01
CHD8-202ENST00000430710 SPRR2DP22532 72 aa2.48□□□□□ -2.01
CHD8-202ENST00000430710 MYCBP2O75592 4640 aa2.47□□□□□ -2.01
CHD8-202ENST00000430710 HSPG2P98160 4391 aa2.47□□□□□ -2.01
CHD8-202ENST00000430710 KRTAP9-6A0A140TA67 174 aa2.45□□□□□ -2.02
CHD8-202ENST00000430710 LCE2BO14633 110 aa2.45□□□□□ -2.02
CHD8-202ENST00000430710 RYR1P21817 5038 aa2.44□□□□□ -2.02
CHD8-202ENST00000430710 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
CHD8-202ENST00000430710 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
CHD8-202ENST00000430710 LRP1BQ9NZR2 4599 aa2.42□□□□□ -2.02
CHD8-202ENST00000430710 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.03
CHD8-202ENST00000430710 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
CHD8-202ENST00000430710 KRTAP4-1Q9BYQ7 146 aa2.39□□□□□ -2.03
CHD8-202ENST00000430710 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
CHD8-202ENST00000430710 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
CHD8-202ENST00000430710 MT2AP02795 61 aa2.36□□□□□ -2.03
CHD8-202ENST00000430710 MT3P25713 68 aa2.33□□□□□ -2.04
CHD8-202ENST00000430710 MT4P47944 62 aa2.33□□□□□ -2.04
CHD8-202ENST00000430710 FAT1Q14517 4588 aa2.32□□□□□ -2.04
CHD8-202ENST00000430710 KRTAP19-1Q8IUB9 90 aa2.32□□□□□ -2.04
CHD8-202ENST00000430710 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
CHD8-202ENST00000430710 KMT2CQ8NEZ4 4911 aaKnown RBP2.32□□□□□ -2.04
CHD8-202ENST00000430710 LPAP08519 4548 aa2.32□□□□□ -2.04
CHD8-202ENST00000430710 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
CHD8-202ENST00000430710 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
CHD8-202ENST00000430710 MT1FP04733 61 aa2.29□□□□□ -2.04
CHD8-202ENST00000430710 RYR2Q92736 4967 aa2.29□□□□□ -2.04
CHD8-202ENST00000430710 KRTAP20-1Q3LI63 56 aa2.27□□□□□ -2.05
CHD8-202ENST00000430710 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
CHD8-202ENST00000430710 KRTAP9-7A8MTY7 169 aa2.26□□□□□ -2.05
CHD8-202ENST00000430710 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
CHD8-202ENST00000430710 RYR3Q15413 4870 aa2.26□□□□□ -2.05
CHD8-202ENST00000430710 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
CHD8-202ENST00000430710 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
CHD8-202ENST00000430710 KIAA1109Q2LD37 5005 aa2.21□□□□□ -2.06
CHD8-202ENST00000430710 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
CHD8-202ENST00000430710 LCE3BQ5TA77 95 aa2.2□□□□□ -2.06
CHD8-202ENST00000430710 LCE2AQ5TA79 106 aaPredicted RBP2.18□□□□□ -2.06
CHD8-202ENST00000430710 MUC17Q685J3 4493 aa2.17□□□□□ -2.06
CHD8-202ENST00000430710 HERC2O95714 4834 aa2.16□□□□□ -2.06
CHD8-202ENST00000430710 MT1XP80297 61 aa2.15□□□□□ -2.06
CHD8-202ENST00000430710 MT1BP07438 61 aa2.13□□□□□ -2.07
CHD8-202ENST00000430710 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
CHD8-202ENST00000430710 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
CHD8-202ENST00000430710 MT1GP13640 62 aa2.1□□□□□ -2.07
CHD8-202ENST00000430710 KRTAP4-9Q9BYQ8 210 aa2.09□□□□□ -2.07
CHD8-202ENST00000430710 KRTAP4-8A0A0G2JLE6 195 aa2.08□□□□□ -2.08
CHD8-202ENST00000430710 KRTAP4-8Q9BYQ9 185 aa2.08□□□□□ -2.08
CHD8-202ENST00000430710 LRP2P98164 4655 aa2.08□□□□□ -2.08
CHD8-202ENST00000430710 KRTAP19-6Q3LI70 58 aa2.08□□□□□ -2.08
CHD8-202ENST00000430710 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CHD8-202ENST00000430710 EPPK1P58107 5090 aaKnown RBP2.07□□□□□ -2.08
CHD8-202ENST00000430710 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms