RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 NOP10Q9NPE3 64 aaKnown RBP2.24□□□□□ -2.05
HMGB3-203ENST00000430118 A0A1W2PNM2 257 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 H0Y9P7 68 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 ROMO1P60602 79 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 SPAG11BQ08648 103 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 COX17Q14061 63 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 SPINK13Q1W4C9 94 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 COA5Q86WW8 74 aa2.23□□□□□ -2.05
HMGB3-203ENST00000430118 A0A096LPF7 62 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 LINC00158P58513 81 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 Q6ZQY7 126 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 C9orf163Q8N9P6 203 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 PRO0255Q9UI72 69 aa2.22□□□□□ -2.05
HMGB3-203ENST00000430118 A0A1B0GU33 70 aa2.21□□□□□ -2.06
HMGB3-203ENST00000430118 COX6A2Q02221 97 aa2.21□□□□□ -2.06
HMGB3-203ENST00000430118 LELP1Q5T871 98 aa2.21□□□□□ -2.06
HMGB3-203ENST00000430118 A0A087WSZ3 146 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 TRGV4A0A0C4DH28 118 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 A8MTW9 85 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 MT1HL1P0DM35 61 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 SPINK7P58062 85 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 KRTAP10-4P60372 401 aaPredicted RBP2.2□□□□□ -2.06
HMGB3-203ENST00000430118 SPAG11AQ6PDA7 123 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 SPATA8Q6RVD6 105 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 ADM2Q7Z4H4 148 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 WFDC10BQ8IUB3 73 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 Q8IZM0 81 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 R4GN34 69 aa2.2□□□□□ -2.06
HMGB3-203ENST00000430118 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
HMGB3-203ENST00000430118 DEFB1P60022 68 aa2.19□□□□□ -2.06
HMGB3-203ENST00000430118 LINC01556Q5JQF7 62 aa2.19□□□□□ -2.06
HMGB3-203ENST00000430118 Q8NDZ9 215 aa2.19□□□□□ -2.06
HMGB3-203ENST00000430118 FSIP2Q5CZC0 6907 aa2.19□□□□□ -2.06
HMGB3-203ENST00000430118 IGLV5-48A0A075B6I7 105 aa2.18□□□□□ -2.06
HMGB3-203ENST00000430118 IGLV6-57P01721 117 aa2.18□□□□□ -2.06
HMGB3-203ENST00000430118 CSAG1Q6PB30 78 aa2.18□□□□□ -2.06
HMGB3-203ENST00000430118 SPRR4Q96PI1 79 aa2.18□□□□□ -2.06
HMGB3-203ENST00000430118 LPAP08519 4548 aa2.18□□□□□ -2.06
HMGB3-203ENST00000430118 LINC00959A0A1B0GUT2 108 aa2.17□□□□□ -2.06
HMGB3-203ENST00000430118 MIR22HGQ0VDD5 57 aa2.16□□□□□ -2.06
HMGB3-203ENST00000430118 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
HMGB3-203ENST00000430118 KRTAP13-3Q3SY46 172 aa2.16□□□□□ -2.06
HMGB3-203ENST00000430118 C1orf137Q5JT78 98 aa2.16□□□□□ -2.06
HMGB3-203ENST00000430118 UQCR11O14957 56 aa2.15□□□□□ -2.07
HMGB3-203ENST00000430118 HRES1P13985 223 aa2.15□□□□□ -2.07
HMGB3-203ENST00000430118 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
HMGB3-203ENST00000430118 K7EQZ3 153 aa2.14□□□□□ -2.07
HMGB3-203ENST00000430118 TOMM7Q9P0U1 55 aa2.14□□□□□ -2.07
HMGB3-203ENST00000430118 IGLV10-54A0A075B6I4 117 aa2.13□□□□□ -2.07
HMGB3-203ENST00000430118 GVQW2A0A096LPI5 108 aaPredicted RBP2.13□□□□□ -2.07
HMGB3-203ENST00000430118 IGKV2-24A0A0C4DH68 120 aa2.13□□□□□ -2.07
HMGB3-203ENST00000430118 SPINK6Q6UWN8 80 aa2.13□□□□□ -2.07
HMGB3-203ENST00000430118 DMAC1Q96GE9 116 aa2.13□□□□□ -2.07
HMGB3-203ENST00000430118 P0C880 135 aa2.12□□□□□ -2.07
HMGB3-203ENST00000430118 TP53AIP1Q9HCN2 124 aa2.12□□□□□ -2.07
HMGB3-203ENST00000430118 PSORS1C2Q9UIG4 136 aa2.12□□□□□ -2.07
HMGB3-203ENST00000430118 KRTAP26-1Q6PEX3 210 aa2.11□□□□□ -2.07
HMGB3-203ENST00000430118 C20orf166-AS1Q96NR2 134 aa2.11□□□□□ -2.07
HMGB3-203ENST00000430118 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
HMGB3-203ENST00000430118 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
HMGB3-203ENST00000430118 MUC17Q685J3 4493 aa2.09□□□□□ -2.07
HMGB3-203ENST00000430118 A0A1B0GU69 56 aa2.09□□□□□ -2.07
HMGB3-203ENST00000430118 LINC00304Q8N9R0 145 aa2.09□□□□□ -2.07
HMGB3-203ENST00000430118 SPACA4Q8TDM5 124 aa2.09□□□□□ -2.07
HMGB3-203ENST00000430118 ANGP03950 147 aaKnown RBP2.07□□□□□ -2.08
HMGB3-203ENST00000430118 ACYP2P14621 99 aa2.07□□□□□ -2.08
HMGB3-203ENST00000430118 WFDC13Q8IUB5 93 aa2.07□□□□□ -2.08
HMGB3-203ENST00000430118 LINC00472Q9H8W2 130 aa2.07□□□□□ -2.08
HMGB3-203ENST00000430118 IGKV3OR2-268A0A0C4DH90 116 aa2.06□□□□□ -2.08
HMGB3-203ENST00000430118 A0A1W2PNN7 141 aa2.06□□□□□ -2.08
HMGB3-203ENST00000430118 MMP24-AS1A0A0U1RRL7 71 aa2.05□□□□□ -2.08
HMGB3-203ENST00000430118 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
HMGB3-203ENST00000430118 SPRR1AP35321 89 aa2.04□□□□□ -2.08
HMGB3-203ENST00000430118 Q6ZRX8 168 aa2.04□□□□□ -2.08
HMGB3-203ENST00000430118 C6orf48Q9UBA6 75 aa2.04□□□□□ -2.08
HMGB3-203ENST00000430118 PCOTHQ58A44 107 aa2.03□□□□□ -2.08
HMGB3-203ENST00000430118 TPRXLQ17RH7 258 aa2.02□□□□□ -2.09
HMGB3-203ENST00000430118 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
HMGB3-203ENST00000430118 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
HMGB3-203ENST00000430118 A0A096LNI7 61 aa2□□□□□ -2.09
HMGB3-203ENST00000430118 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
HMGB3-203ENST00000430118 USH2AO75445 5202 aa1.99□□□□□ -2.09
HMGB3-203ENST00000430118 SPRR1BP22528 89 aa1.98□□□□□ -2.09
HMGB3-203ENST00000430118 MRPL34Q9BQ48 92 aaKnown RBP1.98□□□□□ -2.09
HMGB3-203ENST00000430118 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
HMGB3-203ENST00000430118 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
HMGB3-203ENST00000430118 DEFB105AQ8NG35 78 aa1.97□□□□□ -2.09
HMGB3-203ENST00000430118 Q96NJ1 140 aa1.97□□□□□ -2.09
HMGB3-203ENST00000430118 M0R2T5 61 aa1.96□□□□□ -2.1
HMGB3-203ENST00000430118 LCE3DQ9BYE3 92 aa1.95□□□□□ -2.1
HMGB3-203ENST00000430118 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
HMGB3-203ENST00000430118 A0A0G2JQZ4 141 aa1.94□□□□□ -2.1
HMGB3-203ENST00000430118 H0YAA0 97 aa1.94□□□□□ -2.1
HMGB3-203ENST00000430118 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
HMGB3-203ENST00000430118 SSPOA2VEC9 5147 aa1.93□□□□□ -2.1
HMGB3-203ENST00000430118 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
HMGB3-203ENST00000430118 KRTAP5-2Q701N4 177 aa1.92□□□□□ -2.1
HMGB3-203ENST00000430118 SSBP3-AS1Q7Z2R9 100 aa1.92□□□□□ -2.1
HMGB3-203ENST00000430118 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms