RNA–Protein interactions for RNA: ENST00000424085.6

PUM1-205, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5 BASIC

Gene PUM1, Length 4,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-205ENST00000424085 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
PUM1-205ENST00000424085 KRTAP4-5Q9BYR2 181 aa3.56□□□□□ -1.84
PUM1-205ENST00000424085 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
PUM1-205ENST00000424085 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
PUM1-205ENST00000424085 VPS13DQ5THJ4 4388 aa3.51□□□□□ -1.85
PUM1-205ENST00000424085 DNAH17Q9UFH2 4485 aa3.5□□□□□ -1.85
PUM1-205ENST00000424085 ALMS1Q8TCU4 4167 aa3.46□□□□□ -1.86
PUM1-205ENST00000424085 STARD9Q9P2P6 4700 aa3.45□□□□□ -1.86
PUM1-205ENST00000424085 DNAH8Q96JB1 4490 aa3.45□□□□□ -1.86
PUM1-205ENST00000424085 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
PUM1-205ENST00000424085 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
PUM1-205ENST00000424085 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
PUM1-205ENST00000424085 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
PUM1-205ENST00000424085 LRP1BQ9NZR2 4599 aa3.41□□□□□ -1.86
PUM1-205ENST00000424085 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
PUM1-205ENST00000424085 ANK2Q01484 3957 aa3.38□□□□□ -1.87
PUM1-205ENST00000424085 DNHD1Q96M86 4753 aa3.38□□□□□ -1.87
PUM1-205ENST00000424085 FAT1Q14517 4588 aa3.37□□□□□ -1.87
PUM1-205ENST00000424085 DYNC1H1Q14204 4646 aaKnown RBP3.36□□□□□ -1.87
PUM1-205ENST00000424085 KMT2AQ03164 3969 aa3.35□□□□□ -1.87
PUM1-205ENST00000424085 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
PUM1-205ENST00000424085 INE1O15225 51 aa3.33□□□□□ -1.88
PUM1-205ENST00000424085 DYNC2H1Q8NCM8 4307 aaKnown RBP3.32□□□□□ -1.88
PUM1-205ENST00000424085 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
PUM1-205ENST00000424085 KRTAP23-1A1A580 65 aa3.31□□□□□ -1.88
PUM1-205ENST00000424085 CMYA5Q8N3K9 4069 aa3.3□□□□□ -1.88
PUM1-205ENST00000424085 VPS13BQ7Z7G8 4022 aa3.3□□□□□ -1.88
PUM1-205ENST00000424085 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
PUM1-205ENST00000424085 FRAS1Q86XX4 4008 aa3.29□□□□□ -1.88
PUM1-205ENST00000424085 LYSTQ99698 3801 aa3.29□□□□□ -1.88
PUM1-205ENST00000424085 HECTD4Q9Y4D8 3996 aa3.27□□□□□ -1.89
PUM1-205ENST00000424085 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
PUM1-205ENST00000424085 FAT2Q9NYQ8 4349 aa3.25□□□□□ -1.89
PUM1-205ENST00000424085 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
PUM1-205ENST00000424085 DNAH6Q9C0G6 4158 aa3.23□□□□□ -1.89
PUM1-205ENST00000424085 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
PUM1-205ENST00000424085 APOBP04114 4563 aaKnown RBP3.21□□□□□ -1.89
PUM1-205ENST00000424085 MYCBP2O75592 4640 aa3.21□□□□□ -1.9
PUM1-205ENST00000424085 SPRR2FQ96RM1 72 aa3.2□□□□□ -1.9
PUM1-205ENST00000424085 MT1HP80294 61 aa3.2□□□□□ -1.9
PUM1-205ENST00000424085 RYR1P21817 5038 aa3.19□□□□□ -1.9
PUM1-205ENST00000424085 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
PUM1-205ENST00000424085 MT2AP02795 61 aa3.16□□□□□ -1.9
PUM1-205ENST00000424085 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
PUM1-205ENST00000424085 KIAA1109Q2LD37 5005 aa3.11□□□□□ -1.91
PUM1-205ENST00000424085 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
PUM1-205ENST00000424085 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
PUM1-205ENST00000424085 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
PUM1-205ENST00000424085 KRTAP17-1Q9BYP8 105 aa3.08□□□□□ -1.92
PUM1-205ENST00000424085 RYR3Q15413 4870 aa3.07□□□□□ -1.92
PUM1-205ENST00000424085 MT1FP04733 61 aa3.06□□□□□ -1.92
PUM1-205ENST00000424085 PKHD1P08F94 4074 aa3.05□□□□□ -1.92
PUM1-205ENST00000424085 RYR2Q92736 4967 aa3.03□□□□□ -1.92
PUM1-205ENST00000424085 KRTAP19-4Q3LI73 84 aa3.02□□□□□ -1.93
PUM1-205ENST00000424085 SPRR2EP22531 72 aa3.01□□□□□ -1.93
PUM1-205ENST00000424085 SPRR2BP35325 72 aa3.01□□□□□ -1.93
PUM1-205ENST00000424085 SPRR2AP35326 72 aa3.01□□□□□ -1.93
PUM1-205ENST00000424085 LRP2P98164 4655 aa3.01□□□□□ -1.93
PUM1-205ENST00000424085 PKD1P98161 4303 aa3□□□□□ -1.93
PUM1-205ENST00000424085 KRTAP19-5Q3LI72 72 aa2.98□□□□□ -1.93
PUM1-205ENST00000424085 HSPG2P98160 4391 aa2.94□□□□□ -1.94
PUM1-205ENST00000424085 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
PUM1-205ENST00000424085 KRTAP19-1Q8IUB9 90 aa2.94□□□□□ -1.94
PUM1-205ENST00000424085 SPRR2DP22532 72 aa2.92□□□□□ -1.94
PUM1-205ENST00000424085 KMT2CQ8NEZ4 4911 aaKnown RBP2.92□□□□□ -1.94
PUM1-205ENST00000424085 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
PUM1-205ENST00000424085 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
PUM1-205ENST00000424085 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
PUM1-205ENST00000424085 LCE2BO14633 110 aa2.89□□□□□ -1.95
PUM1-205ENST00000424085 HERC2O95714 4834 aa2.88□□□□□ -1.95
PUM1-205ENST00000424085 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
PUM1-205ENST00000424085 TNXBP22105 4242 aa2.87□□□□□ -1.95
PUM1-205ENST00000424085 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
PUM1-205ENST00000424085 LPAP08519 4548 aa2.86□□□□□ -1.95
PUM1-205ENST00000424085 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
PUM1-205ENST00000424085 MT1XP80297 61 aa2.82□□□□□ -1.96
PUM1-205ENST00000424085 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
PUM1-205ENST00000424085 LCE2CQ5TA81 110 aa2.81□□□□□ -1.96
PUM1-205ENST00000424085 MT1GP13640 62 aa2.8□□□□□ -1.96
PUM1-205ENST00000424085 MT1BP07438 61 aa2.8□□□□□ -1.96
PUM1-205ENST00000424085 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
PUM1-205ENST00000424085 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
PUM1-205ENST00000424085 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
PUM1-205ENST00000424085 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
PUM1-205ENST00000424085 HERC1Q15751 4861 aa2.75□□□□□ -1.97
PUM1-205ENST00000424085 FLGP20930 4061 aaPredicted RBP2.74□□□□□ -1.97
PUM1-205ENST00000424085 BIRC6Q9NR09 4857 aa2.72□□□□□ -1.97
PUM1-205ENST00000424085 LCE2DQ5TA82 110 aaPredicted RBP2.71□□□□□ -1.98
PUM1-205ENST00000424085 KRTAP9-3Q9BYQ3 159 aa2.7□□□□□ -1.98
PUM1-205ENST00000424085 ABCA13Q86UQ4 5058 aa2.69□□□□□ -1.98
PUM1-205ENST00000424085 KRTAP4-8A0A0G2JLE6 195 aa2.68□□□□□ -1.98
PUM1-205ENST00000424085 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
PUM1-205ENST00000424085 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
PUM1-205ENST00000424085 KRTAP9-2Q9BYQ4 174 aa2.65□□□□□ -1.99
PUM1-205ENST00000424085 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
PUM1-205ENST00000424085 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
PUM1-205ENST00000424085 KRTAP9-6A0A140TA67 174 aa2.58□□□□□ -2
PUM1-205ENST00000424085 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
PUM1-205ENST00000424085 MT4P47944 62 aa2.57□□□□□ -2
PUM1-205ENST00000424085 MT1LQ93083 61 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms