RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 TACC2O95359 2948 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 NIPBLQ6KC79 2804 aaeCLIP0.89□□□□□ -2.27
VPS8-202ENST00000421069 CSPG4Q6UVK1 2322 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 SONP18583 2426 aaKnown RBP0.88□□□□□ -2.27
VPS8-202ENST00000421069 H1FX-AS1Q4G0G2 97 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 DEFB105AQ8NG35 78 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 RPL39LQ96EH5 51 aaKnown RBP0.88□□□□□ -2.27
VPS8-202ENST00000421069 ACANP16112 2415 aa0.88□□□□□ -2.27
VPS8-202ENST00000421069 CENPEQ02224 2701 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 NBPF19A0A087WUL8 3843 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 SPRR1AP35321 89 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 LINC01556Q5JQF7 62 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 BSNQ9UPA5 3926 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 ITPR2Q14571 2701 aa0.87□□□□□ -2.27
VPS8-202ENST00000421069 A0A096LNI7 61 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 RPL39P62891 51 aaKnown RBP0.86□□□□□ -2.27
VPS8-202ENST00000421069 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 MTORP42345 2549 aa0.86□□□□□ -2.27
VPS8-202ENST00000421069 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
VPS8-202ENST00000421069 CUBNO60494 3623 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 DNHD1Q96M86 4753 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 KLK9Q2XQG4 91 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 MEGF8Q7Z7M0 2845 aa0.85□□□□□ -2.27
VPS8-202ENST00000421069 WNK2Q9Y3S1 2297 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 H3BNG1 76 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 M0QY20 66 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 SPRR1BP22528 89 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 PRLHP81277 87 aa0.84□□□□□ -2.27
VPS8-202ENST00000421069 SVEP1Q4LDE5 3571 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 AKAP9Q99996 3911 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 WNK1Q9H4A3 2382 aa0.84□□□□□ -2.28
VPS8-202ENST00000421069 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 POLR2KP53803 58 aaKnown RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 NSD1Q96L73 2696 aaPredicted RBP0.83□□□□□ -2.28
VPS8-202ENST00000421069 TLN2Q9Y4G6 2542 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 ZANQ9Y493 2812 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 ATRQ13535 2644 aa0.83□□□□□ -2.28
VPS8-202ENST00000421069 STAB1Q9NY15 2570 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 MXRA5Q9NR99 2828 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 IGLV5-48A0A075B6I7 105 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 MMP24-AS1A0A0U1RRL7 71 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 A8MTW9 85 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 SPINK6Q6UWN8 80 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 NBEAL1Q6ZS30 2694 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 TENM2Q9NT68 2774 aa0.82□□□□□ -2.28
VPS8-202ENST00000421069 ANK3Q12955 4377 aaKnown RBP0.81□□□□□ -2.28
VPS8-202ENST00000421069 C9orf92A6NGG3 77 aa0.81□□□□□ -2.28
VPS8-202ENST00000421069 M0R2T5 61 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 VWFP04275 2813 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 VPS13CQ709C8 3753 aa0.8□□□□□ -2.28
VPS8-202ENST00000421069 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
VPS8-202ENST00000421069 S4R3F8 94 aa0.79□□□□□ -2.28
VPS8-202ENST00000421069 TGP01266 2768 aa0.78□□□□□ -2.29
VPS8-202ENST00000421069 PKD1L1Q8TDX9 2849 aa0.78□□□□□ -2.29
VPS8-202ENST00000421069 NBEAL2Q6ZNJ1 2754 aa0.77□□□□□ -2.29
VPS8-202ENST00000421069 SPINK1P00995 79 aa0.76□□□□□ -2.29
VPS8-202ENST00000421069 RYR3Q15413 4870 aa0.76□□□□□ -2.29
VPS8-202ENST00000421069 EPPK1P58107 5090 aaKnown RBP0.75□□□□□ -2.29
VPS8-202ENST00000421069 MT1HL1P0DM35 61 aa0.75□□□□□ -2.29
VPS8-202ENST00000421069 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
VPS8-202ENST00000421069 RYR2Q92736 4967 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 BIRC6Q9NR09 4857 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 GPR98Q8WXG9 6306 aa0.74□□□□□ -2.29
VPS8-202ENST00000421069 KMT2CQ8NEZ4 4911 aaKnown RBP0.74□□□□□ -2.29
VPS8-202ENST00000421069 COL7A1Q02388 2944 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 TRRAPQ9Y4A5 3859 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 HYDINQ4G0P3 5121 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 KIAA1109Q2LD37 5005 aa0.73□□□□□ -2.29
VPS8-202ENST00000421069 PCLOQ9Y6V0 5065 aa0.72□□□□□ -2.29
VPS8-202ENST00000421069 HUWE1Q7Z6Z7 4374 aaKnown RBP0.72□□□□□ -2.29
VPS8-202ENST00000421069 ANK2Q01484 3957 aa0.72□□□□□ -2.29
VPS8-202ENST00000421069 AHNAKQ09666 5890 aaKnown RBP0.71□□□□□ -2.3
VPS8-202ENST00000421069 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
VPS8-202ENST00000421069 PRKDCP78527 4128 aaKnown RBP0.71□□□□□ -2.3
VPS8-202ENST00000421069 DNAH11Q96DT5 4516 aa0.71□□□□□ -2.3
VPS8-202ENST00000421069 DNAH9Q9NYC9 4486 aa0.7□□□□□ -2.3
VPS8-202ENST00000421069 HERC2O95714 4834 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 ABCA13Q86UQ4 5058 aa0.69□□□□□ -2.3
VPS8-202ENST00000421069 VPS13DQ5THJ4 4388 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 SACSQ9NZJ4 4579 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
VPS8-202ENST00000421069 RYR1P21817 5038 aa0.67□□□□□ -2.3
VPS8-202ENST00000421069 DYNC1H1Q14204 4646 aaKnown RBP0.67□□□□□ -2.3
VPS8-202ENST00000421069 PLECQ15149 4684 aaKnown RBP0.66□□□□□ -2.3
VPS8-202ENST00000421069 RPS29P62273 56 aaKnown RBP0.66□□□□□ -2.3
VPS8-202ENST00000421069 MT1HP80294 61 aa0.66□□□□□ -2.3
VPS8-202ENST00000421069 CSMD3Q7Z407 3707 aa0.66□□□□□ -2.3
VPS8-202ENST00000421069 FSIP2Q5CZC0 6907 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 MYCBP2O75592 4640 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 UBR4Q5T4S7 5183 aa0.65□□□□□ -2.3
VPS8-202ENST00000421069 DMBT1Q9UGM3 2413 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms