RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 FBN3Q75N90 2809 aa3.32□□□□□ -1.88
CHD2-202ENST00000420239 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
CHD2-202ENST00000420239 KRTAP21-3Q3LHN1 58 aa3.31□□□□□ -1.88
CHD2-202ENST00000420239 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
CHD2-202ENST00000420239 NBEAL1Q6ZS30 2694 aa3.29□□□□□ -1.88
CHD2-202ENST00000420239 NOTCH1P46531 2555 aa3.29□□□□□ -1.88
CHD2-202ENST00000420239 STAB1Q9NY15 2570 aa3.29□□□□□ -1.88
CHD2-202ENST00000420239 MEGF8Q7Z7M0 2845 aa3.28□□□□□ -1.88
CHD2-202ENST00000420239 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
CHD2-202ENST00000420239 TPRXLQ17RH7 258 aa3.28□□□□□ -1.88
CHD2-202ENST00000420239 COL6A5A8TX70 2615 aa3.26□□□□□ -1.89
CHD2-202ENST00000420239 STAB2Q8WWQ8 2551 aa3.26□□□□□ -1.89
CHD2-202ENST00000420239 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
CHD2-202ENST00000420239 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
CHD2-202ENST00000420239 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
CHD2-202ENST00000420239 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
CHD2-202ENST00000420239 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
CHD2-202ENST00000420239 DNAH5Q8TE73 4624 aa3.25□□□□□ -1.89
CHD2-202ENST00000420239 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
CHD2-202ENST00000420239 K7ERS5 55 aa3.24□□□□□ -1.89
CHD2-202ENST00000420239 C20orf166-AS1Q96NR2 134 aa3.23□□□□□ -1.89
CHD2-202ENST00000420239 TGP01266 2768 aa3.23□□□□□ -1.89
CHD2-202ENST00000420239 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
CHD2-202ENST00000420239 STARD9Q9P2P6 4700 aa3.23□□□□□ -1.89
CHD2-202ENST00000420239 FLG2Q5D862 2391 aaPredicted RBP3.21□□□□□ -1.89
CHD2-202ENST00000420239 KRTAP13-4Q3LI77 160 aa3.21□□□□□ -1.9
CHD2-202ENST00000420239 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
CHD2-202ENST00000420239 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
CHD2-202ENST00000420239 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
CHD2-202ENST00000420239 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
CHD2-202ENST00000420239 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
CHD2-202ENST00000420239 A0A0D9SG42 100 aa3.17□□□□□ -1.9
CHD2-202ENST00000420239 C9orf92A6NGG3 77 aa3.15□□□□□ -1.9
CHD2-202ENST00000420239 MGAM2Q2M2H8 2515 aa3.15□□□□□ -1.91
CHD2-202ENST00000420239 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
CHD2-202ENST00000420239 PKD1P98161 4303 aa3.14□□□□□ -1.91
CHD2-202ENST00000420239 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
CHD2-202ENST00000420239 S4R3F8 94 aa3.11□□□□□ -1.91
CHD2-202ENST00000420239 VPS13BQ7Z7G8 4022 aa3.11□□□□□ -1.91
CHD2-202ENST00000420239 FAT2Q9NYQ8 4349 aa3.11□□□□□ -1.91
CHD2-202ENST00000420239 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
CHD2-202ENST00000420239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
CHD2-202ENST00000420239 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
CHD2-202ENST00000420239 APOBP04114 4563 aaKnown RBP3.06□□□□□ -1.92
CHD2-202ENST00000420239 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
CHD2-202ENST00000420239 PKHD1P08F94 4074 aa3.04□□□□□ -1.92
CHD2-202ENST00000420239 KRTAP10-4P60372 401 aaPredicted RBP3.03□□□□□ -1.92
CHD2-202ENST00000420239 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
CHD2-202ENST00000420239 LRP1Q07954 4544 aaKnown RBP3.01□□□□□ -1.93
CHD2-202ENST00000420239 FAT3Q8TDW7 4589 aa3□□□□□ -1.93
CHD2-202ENST00000420239 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
CHD2-202ENST00000420239 TNXBP22105 4242 aa2.98□□□□□ -1.93
CHD2-202ENST00000420239 MYCBP2O75592 4640 aa2.98□□□□□ -1.93
CHD2-202ENST00000420239 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
CHD2-202ENST00000420239 FAT1Q14517 4588 aa2.97□□□□□ -1.93
CHD2-202ENST00000420239 HSPG2P98160 4391 aa2.97□□□□□ -1.93
CHD2-202ENST00000420239 M0QZ58 72 aa2.97□□□□□ -1.93
CHD2-202ENST00000420239 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
CHD2-202ENST00000420239 MT3P25713 68 aa2.96□□□□□ -1.94
CHD2-202ENST00000420239 SMR3BP02814 79 aaPredicted RBP2.95□□□□□ -1.94
CHD2-202ENST00000420239 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
CHD2-202ENST00000420239 A0A1B0GVY2 172 aa2.93□□□□□ -1.94
CHD2-202ENST00000420239 DMBT1Q9UGM3 2413 aaPredicted RBP2.93□□□□□ -1.94
CHD2-202ENST00000420239 RYR3Q15413 4870 aa2.92□□□□□ -1.94
CHD2-202ENST00000420239 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
CHD2-202ENST00000420239 BIRC6Q9NR09 4857 aa2.87□□□□□ -1.95
CHD2-202ENST00000420239 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
CHD2-202ENST00000420239 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
CHD2-202ENST00000420239 EPPK1P58107 5090 aaKnown RBP2.82□□□□□ -1.96
CHD2-202ENST00000420239 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
CHD2-202ENST00000420239 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
CHD2-202ENST00000420239 R4GN34 69 aa2.78□□□□□ -1.96
CHD2-202ENST00000420239 RYR2Q92736 4967 aa2.77□□□□□ -1.97
CHD2-202ENST00000420239 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
CHD2-202ENST00000420239 LPAP08519 4548 aa2.76□□□□□ -1.97
CHD2-202ENST00000420239 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
CHD2-202ENST00000420239 Q5VSD8 79 aa2.74□□□□□ -1.97
CHD2-202ENST00000420239 HERC2O95714 4834 aa2.72□□□□□ -1.97
CHD2-202ENST00000420239 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
CHD2-202ENST00000420239 LRP2P98164 4655 aa2.69□□□□□ -1.98
CHD2-202ENST00000420239 MUC17Q685J3 4493 aa2.69□□□□□ -1.98
CHD2-202ENST00000420239 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
CHD2-202ENST00000420239 RYR1P21817 5038 aa2.68□□□□□ -1.98
CHD2-202ENST00000420239 PRO2289Q9P1D8 64 aa2.66□□□□□ -1.98
CHD2-202ENST00000420239 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.98
CHD2-202ENST00000420239 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
CHD2-202ENST00000420239 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
CHD2-202ENST00000420239 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
CHD2-202ENST00000420239 TNP1P09430 55 aa2.62□□□□□ -1.99
CHD2-202ENST00000420239 HERC1Q15751 4861 aa2.62□□□□□ -1.99
CHD2-202ENST00000420239 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
CHD2-202ENST00000420239 KIAA1109Q2LD37 5005 aa2.59□□□□□ -1.99
CHD2-202ENST00000420239 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
CHD2-202ENST00000420239 INE1O15225 51 aa2.56□□□□□ -2
CHD2-202ENST00000420239 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
CHD2-202ENST00000420239 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
CHD2-202ENST00000420239 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
CHD2-202ENST00000420239 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
CHD2-202ENST00000420239 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
CHD2-202ENST00000420239 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms