RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
LINC00963-202ENST00000419300 DNAH6Q9C0G6 4158 aa4.52□□□□□ -1.69
LINC00963-202ENST00000419300 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
LINC00963-202ENST00000419300 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
LINC00963-202ENST00000419300 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
LINC00963-202ENST00000419300 ANK3Q12955 4377 aaKnown RBP4.4□□□□□ -1.7
LINC00963-202ENST00000419300 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
LINC00963-202ENST00000419300 DNAH2Q9P225 4427 aa4.38□□□□□ -1.71
LINC00963-202ENST00000419300 FRAS1Q86XX4 4008 aa4.37□□□□□ -1.71
LINC00963-202ENST00000419300 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
LINC00963-202ENST00000419300 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
LINC00963-202ENST00000419300 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
LINC00963-202ENST00000419300 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
LINC00963-202ENST00000419300 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
LINC00963-202ENST00000419300 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
LINC00963-202ENST00000419300 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
LINC00963-202ENST00000419300 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
LINC00963-202ENST00000419300 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
LINC00963-202ENST00000419300 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
LINC00963-202ENST00000419300 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
LINC00963-202ENST00000419300 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
LINC00963-202ENST00000419300 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
LINC00963-202ENST00000419300 LORP23490 312 aaPredicted RBP4□□□□□ -1.77
LINC00963-202ENST00000419300 VPS13DQ5THJ4 4388 aa3.98□□□□□ -1.77
LINC00963-202ENST00000419300 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
LINC00963-202ENST00000419300 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
LINC00963-202ENST00000419300 KRTAP4-5Q9BYR2 181 aa3.93□□□□□ -1.78
LINC00963-202ENST00000419300 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
LINC00963-202ENST00000419300 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
LINC00963-202ENST00000419300 DNAH9Q9NYC9 4486 aa3.91□□□□□ -1.78
LINC00963-202ENST00000419300 STARD9Q9P2P6 4700 aa3.87□□□□□ -1.79
LINC00963-202ENST00000419300 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
LINC00963-202ENST00000419300 DNAH17Q9UFH2 4485 aa3.8□□□□□ -1.8
LINC00963-202ENST00000419300 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
LINC00963-202ENST00000419300 MT1HP80294 61 aa3.79□□□□□ -1.8
LINC00963-202ENST00000419300 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.81
LINC00963-202ENST00000419300 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
LINC00963-202ENST00000419300 MT2AP02795 61 aa3.74□□□□□ -1.81
LINC00963-202ENST00000419300 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
LINC00963-202ENST00000419300 PKD1P98161 4303 aa3.72□□□□□ -1.81
LINC00963-202ENST00000419300 DNAH8Q96JB1 4490 aa3.7□□□□□ -1.82
LINC00963-202ENST00000419300 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
LINC00963-202ENST00000419300 KRTAP19-8Q3LI54 63 aa3.64□□□□□ -1.83
LINC00963-202ENST00000419300 MT1FP04733 61 aa3.64□□□□□ -1.83
LINC00963-202ENST00000419300 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
LINC00963-202ENST00000419300 DNAH5Q8TE73 4624 aa3.59□□□□□ -1.84
LINC00963-202ENST00000419300 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
LINC00963-202ENST00000419300 TNXBP22105 4242 aa3.57□□□□□ -1.84
LINC00963-202ENST00000419300 MT1XP80297 61 aa3.54□□□□□ -1.84
LINC00963-202ENST00000419300 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
LINC00963-202ENST00000419300 MT3P25713 68 aa3.51□□□□□ -1.85
LINC00963-202ENST00000419300 HSPG2P98160 4391 aa3.5□□□□□ -1.85
LINC00963-202ENST00000419300 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
LINC00963-202ENST00000419300 LRP1Q07954 4544 aaKnown RBP3.46□□□□□ -1.86
LINC00963-202ENST00000419300 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
LINC00963-202ENST00000419300 LRP1BQ9NZR2 4599 aa3.42□□□□□ -1.86
LINC00963-202ENST00000419300 MT1GP13640 62 aa3.4□□□□□ -1.86
LINC00963-202ENST00000419300 APOBP04114 4563 aaKnown RBP3.39□□□□□ -1.87
LINC00963-202ENST00000419300 SACSQ9NZJ4 4579 aa3.37□□□□□ -1.87
LINC00963-202ENST00000419300 SPRR2EP22531 72 aa3.36□□□□□ -1.87
LINC00963-202ENST00000419300 SPRR2BP35325 72 aa3.36□□□□□ -1.87
LINC00963-202ENST00000419300 SPRR2AP35326 72 aa3.36□□□□□ -1.87
LINC00963-202ENST00000419300 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
LINC00963-202ENST00000419300 LCE2BO14633 110 aa3.34□□□□□ -1.88
LINC00963-202ENST00000419300 MT1BP07438 61 aa3.34□□□□□ -1.88
LINC00963-202ENST00000419300 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
LINC00963-202ENST00000419300 MT1LQ93083 61 aa3.32□□□□□ -1.88
LINC00963-202ENST00000419300 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
LINC00963-202ENST00000419300 RYR1P21817 5038 aa3.3□□□□□ -1.88
LINC00963-202ENST00000419300 SPRR2DP22532 72 aa3.29□□□□□ -1.88
LINC00963-202ENST00000419300 FAT1Q14517 4588 aa3.28□□□□□ -1.88
LINC00963-202ENST00000419300 KRTAP9-3Q9BYQ3 159 aa3.26□□□□□ -1.89
LINC00963-202ENST00000419300 MT1EP04732 61 aa3.24□□□□□ -1.89
LINC00963-202ENST00000419300 DNHD1Q96M86 4753 aa3.23□□□□□ -1.89
LINC00963-202ENST00000419300 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
LINC00963-202ENST00000419300 LCE2CQ5TA81 110 aa3.18□□□□□ -1.9
LINC00963-202ENST00000419300 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
LINC00963-202ENST00000419300 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
LINC00963-202ENST00000419300 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
LINC00963-202ENST00000419300 FAT3Q8TDW7 4589 aa3.11□□□□□ -1.91
LINC00963-202ENST00000419300 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
LINC00963-202ENST00000419300 KRTAP4-8A0A0G2JLE6 195 aa3.09□□□□□ -1.91
LINC00963-202ENST00000419300 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.91
LINC00963-202ENST00000419300 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.91
LINC00963-202ENST00000419300 PRM1P04553 51 aa3.08□□□□□ -1.92
LINC00963-202ENST00000419300 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
LINC00963-202ENST00000419300 MT1MQ8N339 61 aa3.07□□□□□ -1.92
LINC00963-202ENST00000419300 RYR3Q15413 4870 aa3.05□□□□□ -1.92
LINC00963-202ENST00000419300 MUC17Q685J3 4493 aa3.05□□□□□ -1.92
LINC00963-202ENST00000419300 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
LINC00963-202ENST00000419300 MT1AP04731 61 aa3.03□□□□□ -1.92
LINC00963-202ENST00000419300 LCE2DQ5TA82 110 aaPredicted RBP2.99□□□□□ -1.93
LINC00963-202ENST00000419300 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
LINC00963-202ENST00000419300 KRTAP9-2Q9BYQ4 174 aa2.95□□□□□ -1.94
LINC00963-202ENST00000419300 LRP2P98164 4655 aa2.94□□□□□ -1.94
LINC00963-202ENST00000419300 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
LINC00963-202ENST00000419300 KIAA1109Q2LD37 5005 aa2.91□□□□□ -1.94
LINC00963-202ENST00000419300 RYR2Q92736 4967 aa2.89□□□□□ -1.95
LINC00963-202ENST00000419300 LPAP08519 4548 aa2.88□□□□□ -1.95
LINC00963-202ENST00000419300 KRTAP19-7Q3SYF9 63 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms