RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TENM3Q9P273 2699 aa0.82□□□□□ -2.28
HMGB1P49-201ENST00000418882 TENM4Q6N022 2769 aa0.82□□□□□ -2.28
HMGB1P49-201ENST00000418882 PDZD2O15018 2839 aa0.82□□□□□ -2.28
HMGB1P49-201ENST00000418882 ITPR3Q14573 2671 aa0.82□□□□□ -2.28
HMGB1P49-201ENST00000418882 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 PLECQ15149 4684 aaKnown RBP0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 MEGF8Q7Z7M0 2845 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 ABCA12Q86UK0 2595 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 NOP10Q9NPE3 64 aaKnown RBP0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 HECTD4Q9Y4D8 3996 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 POLQO75417 2590 aa0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
HMGB1P49-201ENST00000418882 SACSQ9NZJ4 4579 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 SPRR1AP35321 89 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 PRR15LQ9BU68 103 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 C6orf48Q9UBA6 75 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 PRO0255Q9UI72 69 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 ACANP16112 2415 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 FAM208BQ5VWN6 2430 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 LYSTQ99698 3801 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 IGSF10Q6WRI0 2623 aa0.8□□□□□ -2.28
HMGB1P49-201ENST00000418882 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 H3BNG1 76 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 K7EQZ3 153 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 DEFB136Q30KP8 78 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 LELP1Q5T871 98 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 CACNA1AO00555 2505 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 DNAH5Q8TE73 4624 aa0.79□□□□□ -2.28
HMGB1P49-201ENST00000418882 PKHD1L1Q86WI1 4243 aa0.78□□□□□ -2.28
HMGB1P49-201ENST00000418882 DEFB131BA0A096LNP1 70 aa0.78□□□□□ -2.28
HMGB1P49-201ENST00000418882 H0Y9P7 68 aa0.78□□□□□ -2.28
HMGB1P49-201ENST00000418882 DEFB123Q8N688 67 aa0.78□□□□□ -2.28
HMGB1P49-201ENST00000418882 USP24Q9UPU5 2620 aa0.78□□□□□ -2.29
HMGB1P49-201ENST00000418882 KMT2AQ03164 3969 aa0.78□□□□□ -2.29
HMGB1P49-201ENST00000418882 DYNC1H1Q14204 4646 aaKnown RBP0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 FASNP49327 2511 aaKnown RBP0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 ATRQ13535 2644 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 HECTD1Q9ULT8 2610 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 APOBP04114 4563 aaKnown RBP0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 CSMD3Q7Z407 3707 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 A0A096LPF7 62 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 DEFB130BP0DP73 79 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 DEFB130AP0DP74 79 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 SPRR1BP22528 89 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 SPINK7P58062 85 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 SPATA8Q6RVD6 105 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 TP53AIP1Q9HCN2 124 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 PKD1P98161 4303 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 NSD1Q96L73 2696 aaPredicted RBP0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 VPS13BQ7Z7G8 4022 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 LRP1BQ9NZR2 4599 aa0.77□□□□□ -2.29
HMGB1P49-201ENST00000418882 FAT3Q8TDW7 4589 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 FLNBO75369 2602 aaKnown RBP0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 ZNF462Q96JM2 2506 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 HSPG2P98160 4391 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 FAT2Q9NYQ8 4349 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 TNXBP22105 4242 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 SPART-AS1P0CW21 52 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 LINC01556Q5JQF7 62 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 SSBP3-AS1Q7Z2R9 100 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 WFDC13Q8IUB5 93 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 DEFB105AQ8NG35 78 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
HMGB1P49-201ENST00000418882 COL6A5A8TX70 2615 aa0.75□□□□□ -2.29
HMGB1P49-201ENST00000418882 WFDC10BQ8IUB3 73 aa0.75□□□□□ -2.29
HMGB1P49-201ENST00000418882 MAST4O15021 2626 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 MRPL34Q9BQ48 92 aaKnown RBP0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 TGP01266 2768 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 STARD9Q9P2P6 4700 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 HYDINQ4G0P3 5121 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 STAB1Q9NY15 2570 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 PKHD1P08F94 4074 aa0.74□□□□□ -2.29
HMGB1P49-201ENST00000418882 FAT1Q14517 4588 aa0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 MGAM2Q2M2H8 2515 aa0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 DEFB4AO15263 64 aa0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 HTN3P15516 51 aa0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 LRP1Q07954 4544 aaKnown RBP0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 STAB2Q8WWQ8 2551 aa0.73□□□□□ -2.29
HMGB1P49-201ENST00000418882 A0A096LNI7 61 aa0.72□□□□□ -2.29
HMGB1P49-201ENST00000418882 A0A1B0GU69 56 aa0.72□□□□□ -2.29
HMGB1P49-201ENST00000418882 PRLHP81277 87 aa0.72□□□□□ -2.29
HMGB1P49-201ENST00000418882 UBE2DNLQ8IWF7 75 aa0.72□□□□□ -2.29
HMGB1P49-201ENST00000418882 MYCBP2O75592 4640 aa0.71□□□□□ -2.3
HMGB1P49-201ENST00000418882 H0YAA0 97 aa0.7□□□□□ -2.3
HMGB1P49-201ENST00000418882 DMBT1Q9UGM3 2413 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P49-201ENST00000418882 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P49-201ENST00000418882 FLGP20930 4061 aaPredicted RBP0.69□□□□□ -2.3
HMGB1P49-201ENST00000418882 HERC1Q15751 4861 aa0.69□□□□□ -2.3
HMGB1P49-201ENST00000418882 H1FX-AS1Q4G0G2 97 aa0.68□□□□□ -2.3
HMGB1P49-201ENST00000418882 COX6B2Q6YFQ2 88 aa0.68□□□□□ -2.3
HMGB1P49-201ENST00000418882 APLNQ9ULZ1 77 aa0.68□□□□□ -2.3
HMGB1P49-201ENST00000418882 DNHD1Q96M86 4753 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms