RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 DNAH5Q8TE73 4624 aa7.35□□□□□ -1.23
SMIM13-202ENST00000416247 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.23
SMIM13-202ENST00000416247 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
SMIM13-202ENST00000416247 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
SMIM13-202ENST00000416247 LYSTQ99698 3801 aa7.28□□□□□ -1.24
SMIM13-202ENST00000416247 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
SMIM13-202ENST00000416247 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
SMIM13-202ENST00000416247 KMT2AQ03164 3969 aa7.19□□□□□ -1.26
SMIM13-202ENST00000416247 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
SMIM13-202ENST00000416247 FAT1Q14517 4588 aa7.11□□□□□ -1.27
SMIM13-202ENST00000416247 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
SMIM13-202ENST00000416247 LRP1BQ9NZR2 4599 aa7.1□□□□□ -1.27
SMIM13-202ENST00000416247 CMYA5Q8N3K9 4069 aa7.09□□□□□ -1.27
SMIM13-202ENST00000416247 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
SMIM13-202ENST00000416247 DNAH17Q9UFH2 4485 aa7.06□□□□□ -1.28
SMIM13-202ENST00000416247 DNAH7Q8WXX0 4024 aa7.05□□□□□ -1.28
SMIM13-202ENST00000416247 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
SMIM13-202ENST00000416247 ALMS1Q8TCU4 4167 aa7.04□□□□□ -1.28
SMIM13-202ENST00000416247 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
SMIM13-202ENST00000416247 DNAH2Q9P225 4427 aa7.01□□□□□ -1.29
SMIM13-202ENST00000416247 RYR1P21817 5038 aa7.01□□□□□ -1.29
SMIM13-202ENST00000416247 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
SMIM13-202ENST00000416247 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
SMIM13-202ENST00000416247 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
SMIM13-202ENST00000416247 DNAH6Q9C0G6 4158 aa6.91□□□□□ -1.3
SMIM13-202ENST00000416247 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
SMIM13-202ENST00000416247 DYNC2H1Q8NCM8 4307 aaKnown RBP6.85□□□□□ -1.31
SMIM13-202ENST00000416247 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
SMIM13-202ENST00000416247 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
SMIM13-202ENST00000416247 MYCBP2O75592 4640 aa6.84□□□□□ -1.32
SMIM13-202ENST00000416247 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
SMIM13-202ENST00000416247 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
SMIM13-202ENST00000416247 HECTD4Q9Y4D8 3996 aa6.8□□□□□ -1.32
SMIM13-202ENST00000416247 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
SMIM13-202ENST00000416247 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
SMIM13-202ENST00000416247 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
SMIM13-202ENST00000416247 LRP1Q07954 4544 aaKnown RBP6.69□□□□□ -1.34
SMIM13-202ENST00000416247 MT1HP80294 61 aa6.67□□□□□ -1.34
SMIM13-202ENST00000416247 PKHD1P08F94 4074 aa6.67□□□□□ -1.34
SMIM13-202ENST00000416247 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.34
SMIM13-202ENST00000416247 APOBP04114 4563 aaKnown RBP6.65□□□□□ -1.35
SMIM13-202ENST00000416247 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
SMIM13-202ENST00000416247 RYR3Q15413 4870 aa6.63□□□□□ -1.35
SMIM13-202ENST00000416247 MT2AP02795 61 aa6.61□□□□□ -1.35
SMIM13-202ENST00000416247 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.37
SMIM13-202ENST00000416247 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
SMIM13-202ENST00000416247 INE1O15225 51 aa6.51□□□□□ -1.37
SMIM13-202ENST00000416247 SPRR2GQ9BYE4 73 aa6.51□□□□□ -1.37
SMIM13-202ENST00000416247 MT1FP04733 61 aa6.5□□□□□ -1.37
SMIM13-202ENST00000416247 KMT2CQ8NEZ4 4911 aaKnown RBP6.46□□□□□ -1.38
SMIM13-202ENST00000416247 RYR2Q92736 4967 aa6.44□□□□□ -1.38
SMIM13-202ENST00000416247 PKD1P98161 4303 aa6.38□□□□□ -1.39
SMIM13-202ENST00000416247 LRP2P98164 4655 aa6.35□□□□□ -1.39
SMIM13-202ENST00000416247 HERC2O95714 4834 aa6.34□□□□□ -1.39
SMIM13-202ENST00000416247 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
SMIM13-202ENST00000416247 HSPG2P98160 4391 aa6.24□□□□□ -1.41
SMIM13-202ENST00000416247 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
SMIM13-202ENST00000416247 KRTAP19-5Q3LI72 72 aa6.18□□□□□ -1.42
SMIM13-202ENST00000416247 LPAP08519 4548 aa6.17□□□□□ -1.42
SMIM13-202ENST00000416247 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
SMIM13-202ENST00000416247 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
SMIM13-202ENST00000416247 EPPK1P58107 5090 aaKnown RBP6.08□□□□□ -1.44
SMIM13-202ENST00000416247 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
SMIM13-202ENST00000416247 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
SMIM13-202ENST00000416247 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
SMIM13-202ENST00000416247 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
SMIM13-202ENST00000416247 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
SMIM13-202ENST00000416247 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
SMIM13-202ENST00000416247 TNXBP22105 4242 aa5.97□□□□□ -1.45
SMIM13-202ENST00000416247 MT1XP80297 61 aa5.95□□□□□ -1.46
SMIM13-202ENST00000416247 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
SMIM13-202ENST00000416247 MT1BP07438 61 aa5.95□□□□□ -1.46
SMIM13-202ENST00000416247 HERC1Q15751 4861 aa5.94□□□□□ -1.46
SMIM13-202ENST00000416247 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
SMIM13-202ENST00000416247 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
SMIM13-202ENST00000416247 MUC2Q02817 5179 aa5.8□□□□□ -1.48
SMIM13-202ENST00000416247 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
SMIM13-202ENST00000416247 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
SMIM13-202ENST00000416247 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
SMIM13-202ENST00000416247 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
SMIM13-202ENST00000416247 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
SMIM13-202ENST00000416247 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
SMIM13-202ENST00000416247 SPRR2EP22531 72 aa5.66□□□□□ -1.5
SMIM13-202ENST00000416247 SPRR2BP35325 72 aa5.66□□□□□ -1.5
SMIM13-202ENST00000416247 SPRR2AP35326 72 aa5.66□□□□□ -1.5
SMIM13-202ENST00000416247 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
SMIM13-202ENST00000416247 RNF213Q63HN8 5207 aa5.65□□□□□ -1.51
SMIM13-202ENST00000416247 MUC17Q685J3 4493 aa5.64□□□□□ -1.51
SMIM13-202ENST00000416247 MT1GP13640 62 aa5.62□□□□□ -1.51
SMIM13-202ENST00000416247 FAT4Q6V0I7 4981 aa5.61□□□□□ -1.51
SMIM13-202ENST00000416247 LCE2BO14633 110 aa5.6□□□□□ -1.51
SMIM13-202ENST00000416247 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
SMIM13-202ENST00000416247 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
SMIM13-202ENST00000416247 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
SMIM13-202ENST00000416247 SPRR2DP22532 72 aa5.45□□□□□ -1.54
SMIM13-202ENST00000416247 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
SMIM13-202ENST00000416247 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
SMIM13-202ENST00000416247 KRTAP19-3Q7Z4W3 81 aa5.37□□□□□ -1.55
SMIM13-202ENST00000416247 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
SMIM13-202ENST00000416247 MT1LQ93083 61 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms