RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 Q6ZSA8 131 aa1.81□□□□□ -2.12
HMGB3P23-201ENST00000414981 ALMS1Q8TCU4 4167 aa1.8□□□□□ -2.12
HMGB3P23-201ENST00000414981 H1FX-AS1Q4G0G2 97 aa1.8□□□□□ -2.12
HMGB3P23-201ENST00000414981 USP24Q9UPU5 2620 aa1.79□□□□□ -2.12
HMGB3P23-201ENST00000414981 CENPEQ02224 2701 aa1.79□□□□□ -2.12
HMGB3P23-201ENST00000414981 VWFP04275 2813 aa1.79□□□□□ -2.12
HMGB3P23-201ENST00000414981 H0YAA0 97 aa1.79□□□□□ -2.12
HMGB3P23-201ENST00000414981 TEP1Q99973 2627 aaKnown RBP1.78□□□□□ -2.12
HMGB3P23-201ENST00000414981 NSD1Q96L73 2696 aaPredicted RBP1.77□□□□□ -2.13
HMGB3P23-201ENST00000414981 DNAH1Q9P2D7 4330 aa1.77□□□□□ -2.13
HMGB3P23-201ENST00000414981 CUBNO60494 3623 aa1.77□□□□□ -2.13
HMGB3P23-201ENST00000414981 ATRQ13535 2644 aa1.76□□□□□ -2.13
HMGB3P23-201ENST00000414981 TENM4Q6N022 2769 aa1.76□□□□□ -2.13
HMGB3P23-201ENST00000414981 TENM3Q9P273 2699 aa1.75□□□□□ -2.13
HMGB3P23-201ENST00000414981 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
HMGB3P23-201ENST00000414981 DNAH3Q8TD57 4116 aa1.75□□□□□ -2.13
HMGB3P23-201ENST00000414981 PKD1L1Q8TDX9 2849 aa1.75□□□□□ -2.13
HMGB3P23-201ENST00000414981 ITPR2Q14571 2701 aa1.74□□□□□ -2.13
HMGB3P23-201ENST00000414981 OTOGQ6ZRI0 2925 aa1.74□□□□□ -2.13
HMGB3P23-201ENST00000414981 TENM1Q9UKZ4 2725 aa1.73□□□□□ -2.13
HMGB3P23-201ENST00000414981 INE1O15225 51 aa1.73□□□□□ -2.13
HMGB3P23-201ENST00000414981 MAST4O15021 2626 aa1.73□□□□□ -2.13
HMGB3P23-201ENST00000414981 FASNP49327 2511 aaKnown RBP1.73□□□□□ -2.13
HMGB3P23-201ENST00000414981 TRRAPQ9Y4A5 3859 aa1.72□□□□□ -2.13
HMGB3P23-201ENST00000414981 ANK2Q01484 3957 aa1.72□□□□□ -2.13
HMGB3P23-201ENST00000414981 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
HMGB3P23-201ENST00000414981 HECTD1Q9ULT8 2610 aa1.72□□□□□ -2.13
HMGB3P23-201ENST00000414981 SRRM2Q9UQ35 2752 aaKnown RBP1.72□□□□□ -2.13
HMGB3P23-201ENST00000414981 CRIPTQ9P021 101 aa1.71□□□□□ -2.14
HMGB3P23-201ENST00000414981 FLNBO75369 2602 aaKnown RBP1.71□□□□□ -2.14
HMGB3P23-201ENST00000414981 BAHCC1Q9P281 2608 aa1.7□□□□□ -2.14
HMGB3P23-201ENST00000414981 DYNC2H1Q8NCM8 4307 aaKnown RBP1.68□□□□□ -2.14
HMGB3P23-201ENST00000414981 M0QZ58 72 aa1.68□□□□□ -2.14
HMGB3P23-201ENST00000414981 HUWE1Q7Z6Z7 4374 aaKnown RBP1.67□□□□□ -2.14
HMGB3P23-201ENST00000414981 FBN1P35555 2871 aaKnown RBP1.67□□□□□ -2.14
HMGB3P23-201ENST00000414981 LYSTQ99698 3801 aa1.67□□□□□ -2.14
HMGB3P23-201ENST00000414981 S4R3F8 94 aa1.66□□□□□ -2.14
HMGB3P23-201ENST00000414981 STAB2Q8WWQ8 2551 aa1.66□□□□□ -2.14
HMGB3P23-201ENST00000414981 CMYA5Q8N3K9 4069 aa1.66□□□□□ -2.14
HMGB3P23-201ENST00000414981 VPS13DQ5THJ4 4388 aa1.66□□□□□ -2.14
HMGB3P23-201ENST00000414981 NBEAL1Q6ZS30 2694 aa1.65□□□□□ -2.14
HMGB3P23-201ENST00000414981 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
HMGB3P23-201ENST00000414981 NOTCH1P46531 2555 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 COL7A1Q02388 2944 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 STAB1Q9NY15 2570 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 FRAS1Q86XX4 4008 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 HECTD4Q9Y4D8 3996 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 TGP01266 2768 aa1.64□□□□□ -2.15
HMGB3P23-201ENST00000414981 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
HMGB3P23-201ENST00000414981 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
HMGB3P23-201ENST00000414981 COL6A5A8TX70 2615 aa1.63□□□□□ -2.15
HMGB3P23-201ENST00000414981 MEGF8Q7Z7M0 2845 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 PRKDCP78527 4128 aaKnown RBP1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH7Q8WXX0 4024 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH10Q8IVF4 4471 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH9Q9NYC9 4486 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 C9orf92A6NGG3 77 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
HMGB3P23-201ENST00000414981 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
HMGB3P23-201ENST00000414981 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH6Q9C0G6 4158 aa1.61□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH8Q96JB1 4490 aa1.61□□□□□ -2.15
HMGB3P23-201ENST00000414981 MGAM2Q2M2H8 2515 aa1.61□□□□□ -2.15
HMGB3P23-201ENST00000414981 A0A0D9SG42 100 aa1.6□□□□□ -2.15
HMGB3P23-201ENST00000414981 FLG2Q5D862 2391 aaPredicted RBP1.6□□□□□ -2.15
HMGB3P23-201ENST00000414981 DNAH17Q9UFH2 4485 aa1.6□□□□□ -2.15
HMGB3P23-201ENST00000414981 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
HMGB3P23-201ENST00000414981 CSMD3Q7Z407 3707 aa1.59□□□□□ -2.16
HMGB3P23-201ENST00000414981 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
HMGB3P23-201ENST00000414981 FBN3Q75N90 2809 aa1.57□□□□□ -2.16
HMGB3P23-201ENST00000414981 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
HMGB3P23-201ENST00000414981 KMT2AQ03164 3969 aa1.55□□□□□ -2.16
HMGB3P23-201ENST00000414981 VPS13BQ7Z7G8 4022 aa1.55□□□□□ -2.16
HMGB3P23-201ENST00000414981 PLECQ15149 4684 aaKnown RBP1.55□□□□□ -2.16
HMGB3P23-201ENST00000414981 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
HMGB3P23-201ENST00000414981 STARD9Q9P2P6 4700 aa1.54□□□□□ -2.16
HMGB3P23-201ENST00000414981 DMBT1Q9UGM3 2413 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P23-201ENST00000414981 KRTAP21-3Q3LHN1 58 aa1.53□□□□□ -2.16
HMGB3P23-201ENST00000414981 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
HMGB3P23-201ENST00000414981 PKHD1L1Q86WI1 4243 aa1.52□□□□□ -2.17
HMGB3P23-201ENST00000414981 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
HMGB3P23-201ENST00000414981 SMR3BP02814 79 aaPredicted RBP1.52□□□□□ -2.17
HMGB3P23-201ENST00000414981 SACSQ9NZJ4 4579 aa1.52□□□□□ -2.17
HMGB3P23-201ENST00000414981 LRP1BQ9NZR2 4599 aa1.49□□□□□ -2.17
HMGB3P23-201ENST00000414981 PKD1P98161 4303 aa1.49□□□□□ -2.17
HMGB3P23-201ENST00000414981 DNAH5Q8TE73 4624 aa1.49□□□□□ -2.17
HMGB3P23-201ENST00000414981 TNP1P09430 55 aa1.47□□□□□ -2.17
HMGB3P23-201ENST00000414981 Q5VSD8 79 aa1.47□□□□□ -2.17
HMGB3P23-201ENST00000414981 MT1HL1P0DM35 61 aa1.46□□□□□ -2.18
HMGB3P23-201ENST00000414981 FAT2Q9NYQ8 4349 aa1.45□□□□□ -2.18
HMGB3P23-201ENST00000414981 TNXBP22105 4242 aa1.45□□□□□ -2.18
HMGB3P23-201ENST00000414981 APOBP04114 4563 aaKnown RBP1.43□□□□□ -2.18
HMGB3P23-201ENST00000414981 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
HMGB3P23-201ENST00000414981 LRP1Q07954 4544 aaKnown RBP1.41□□□□□ -2.18
HMGB3P23-201ENST00000414981 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
HMGB3P23-201ENST00000414981 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
HMGB3P23-201ENST00000414981 KRTAP19-2Q3LHN2 52 aa1.39□□□□□ -2.19
HMGB3P23-201ENST00000414981 HSPG2P98160 4391 aa1.38□□□□□ -2.19
HMGB3P23-201ENST00000414981 SPRR2GQ9BYE4 73 aa1.37□□□□□ -2.19
HMGB3P23-201ENST00000414981 FAT1Q14517 4588 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms