RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 KRTAP4-5Q9BYR2 181 aa5.63□□□□□ -1.51
ABCA13-201ENST00000411975 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
ABCA13-201ENST00000411975 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
ABCA13-201ENST00000411975 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
ABCA13-201ENST00000411975 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
ABCA13-201ENST00000411975 DNAH17Q9UFH2 4485 aa5.57□□□□□ -1.52
ABCA13-201ENST00000411975 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
ABCA13-201ENST00000411975 PRKDCP78527 4128 aaKnown RBP5.5□□□□□ -1.53
ABCA13-201ENST00000411975 DYNC1H1Q14204 4646 aaKnown RBP5.48□□□□□ -1.53
ABCA13-201ENST00000411975 FAT1Q14517 4588 aa5.48□□□□□ -1.53
ABCA13-201ENST00000411975 DNAH2Q9P225 4427 aa5.45□□□□□ -1.54
ABCA13-201ENST00000411975 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
ABCA13-201ENST00000411975 ANK2Q01484 3957 aa5.42□□□□□ -1.54
ABCA13-201ENST00000411975 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
ABCA13-201ENST00000411975 DNAH3Q8TD57 4116 aa5.36□□□□□ -1.55
ABCA13-201ENST00000411975 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
ABCA13-201ENST00000411975 CMYA5Q8N3K9 4069 aa5.34□□□□□ -1.55
ABCA13-201ENST00000411975 KMT2AQ03164 3969 aa5.34□□□□□ -1.56
ABCA13-201ENST00000411975 RYR1P21817 5038 aa5.32□□□□□ -1.56
ABCA13-201ENST00000411975 SACSQ9NZJ4 4579 aa5.29□□□□□ -1.56
ABCA13-201ENST00000411975 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
ABCA13-201ENST00000411975 FAT2Q9NYQ8 4349 aa5.27□□□□□ -1.57
ABCA13-201ENST00000411975 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
ABCA13-201ENST00000411975 LYSTQ99698 3801 aa5.23□□□□□ -1.57
ABCA13-201ENST00000411975 KRTAP4-1Q9BYQ7 146 aa5.22□□□□□ -1.57
ABCA13-201ENST00000411975 VPS13BQ7Z7G8 4022 aa5.21□□□□□ -1.58
ABCA13-201ENST00000411975 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
ABCA13-201ENST00000411975 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
ABCA13-201ENST00000411975 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
ABCA13-201ENST00000411975 RYR3Q15413 4870 aa5.14□□□□□ -1.59
ABCA13-201ENST00000411975 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
ABCA13-201ENST00000411975 DNAH6Q9C0G6 4158 aa5.1□□□□□ -1.59
ABCA13-201ENST00000411975 DNAH7Q8WXX0 4024 aa5.08□□□□□ -1.6
ABCA13-201ENST00000411975 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
ABCA13-201ENST00000411975 HECTD4Q9Y4D8 3996 aa5.08□□□□□ -1.6
ABCA13-201ENST00000411975 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
ABCA13-201ENST00000411975 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
ABCA13-201ENST00000411975 FRAS1Q86XX4 4008 aa5.05□□□□□ -1.6
ABCA13-201ENST00000411975 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
ABCA13-201ENST00000411975 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
ABCA13-201ENST00000411975 RYR2Q92736 4967 aa5.01□□□□□ -1.61
ABCA13-201ENST00000411975 FAT3Q8TDW7 4589 aa4.99□□□□□ -1.61
ABCA13-201ENST00000411975 MT1HP80294 61 aa4.99□□□□□ -1.61
ABCA13-201ENST00000411975 HYDINQ4G0P3 5121 aa4.99□□□□□ -1.61
ABCA13-201ENST00000411975 MT2AP02795 61 aa4.93□□□□□ -1.62
ABCA13-201ENST00000411975 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
ABCA13-201ENST00000411975 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
ABCA13-201ENST00000411975 HERC2O95714 4834 aa4.88□□□□□ -1.63
ABCA13-201ENST00000411975 MT1FP04733 61 aa4.86□□□□□ -1.63
ABCA13-201ENST00000411975 LRP2P98164 4655 aa4.84□□□□□ -1.63
ABCA13-201ENST00000411975 HSPG2P98160 4391 aa4.81□□□□□ -1.64
ABCA13-201ENST00000411975 PKD1P98161 4303 aa4.79□□□□□ -1.64
ABCA13-201ENST00000411975 KMT2CQ8NEZ4 4911 aaKnown RBP4.77□□□□□ -1.65
ABCA13-201ENST00000411975 INE1O15225 51 aa4.75□□□□□ -1.65
ABCA13-201ENST00000411975 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
ABCA13-201ENST00000411975 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
ABCA13-201ENST00000411975 BIRC6Q9NR09 4857 aa4.71□□□□□ -1.66
ABCA13-201ENST00000411975 KRTAP8-1Q8IUC2 63 aa4.67□□□□□ -1.66
ABCA13-201ENST00000411975 KRTAP19-8Q3LI54 63 aa4.64□□□□□ -1.67
ABCA13-201ENST00000411975 HERC1Q15751 4861 aa4.61□□□□□ -1.67
ABCA13-201ENST00000411975 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
ABCA13-201ENST00000411975 PCLOQ9Y6V0 5065 aa4.6□□□□□ -1.67
ABCA13-201ENST00000411975 LPAP08519 4548 aa4.58□□□□□ -1.68
ABCA13-201ENST00000411975 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
ABCA13-201ENST00000411975 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
ABCA13-201ENST00000411975 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
ABCA13-201ENST00000411975 TNXBP22105 4242 aa4.54□□□□□ -1.68
ABCA13-201ENST00000411975 EPPK1P58107 5090 aaKnown RBP4.53□□□□□ -1.68
ABCA13-201ENST00000411975 MT1BP07438 61 aa4.51□□□□□ -1.69
ABCA13-201ENST00000411975 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
ABCA13-201ENST00000411975 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
ABCA13-201ENST00000411975 MT1XP80297 61 aa4.5□□□□□ -1.69
ABCA13-201ENST00000411975 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
ABCA13-201ENST00000411975 KRTAP10-5P60370 271 aa4.46□□□□□ -1.69
ABCA13-201ENST00000411975 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
ABCA13-201ENST00000411975 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
ABCA13-201ENST00000411975 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
ABCA13-201ENST00000411975 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
ABCA13-201ENST00000411975 FLGP20930 4061 aaPredicted RBP4.38□□□□□ -1.71
ABCA13-201ENST00000411975 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
ABCA13-201ENST00000411975 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
ABCA13-201ENST00000411975 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
ABCA13-201ENST00000411975 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
ABCA13-201ENST00000411975 LCE2BO14633 110 aa4.24□□□□□ -1.73
ABCA13-201ENST00000411975 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
ABCA13-201ENST00000411975 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
ABCA13-201ENST00000411975 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
ABCA13-201ENST00000411975 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
ABCA13-201ENST00000411975 MUC2Q02817 5179 aa4.09□□□□□ -1.75
ABCA13-201ENST00000411975 MT1GP13640 62 aa4.09□□□□□ -1.75
ABCA13-201ENST00000411975 LCE2AQ5TA79 106 aaPredicted RBP4.04□□□□□ -1.76
ABCA13-201ENST00000411975 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
ABCA13-201ENST00000411975 SPRR2EP22531 72 aa4.03□□□□□ -1.76
ABCA13-201ENST00000411975 SPRR2BP35325 72 aa4.03□□□□□ -1.76
ABCA13-201ENST00000411975 SPRR2AP35326 72 aa4.03□□□□□ -1.76
ABCA13-201ENST00000411975 MT1LQ93083 61 aa4.03□□□□□ -1.76
ABCA13-201ENST00000411975 LCE2DQ5TA82 110 aaPredicted RBP4.02□□□□□ -1.77
ABCA13-201ENST00000411975 MT1EP04732 61 aa4.01□□□□□ -1.77
ABCA13-201ENST00000411975 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
ABCA13-201ENST00000411975 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms