RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 SPENQ96T58 3664 aaKnown RBP7.4□□□□□ -1.23
HCG11-201ENST00000411553 MT1HP80294 61 aa7.37□□□□□ -1.23
HCG11-201ENST00000411553 KRTAP4-1Q9BYQ7 146 aa7.33□□□□□ -1.24
HCG11-201ENST00000411553 BSNQ9UPA5 3926 aa7.3□□□□□ -1.24
HCG11-201ENST00000411553 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
HCG11-201ENST00000411553 MT2AP02795 61 aa7.26□□□□□ -1.25
HCG11-201ENST00000411553 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
HCG11-201ENST00000411553 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
HCG11-201ENST00000411553 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
HCG11-201ENST00000411553 PLECQ15149 4684 aaKnown RBP7.16□□□□□ -1.26
HCG11-201ENST00000411553 DNAH1Q9P2D7 4330 aa7.15□□□□□ -1.26
HCG11-201ENST00000411553 SPRR2FQ96RM1 72 aa7.14□□□□□ -1.27
HCG11-201ENST00000411553 DNAH2Q9P225 4427 aa7.13□□□□□ -1.27
HCG11-201ENST00000411553 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
HCG11-201ENST00000411553 MT1FP04733 61 aa7.08□□□□□ -1.28
HCG11-201ENST00000411553 DNAH11Q96DT5 4516 aa7.07□□□□□ -1.28
HCG11-201ENST00000411553 KRTAP19-5Q3LI72 72 aa7.05□□□□□ -1.28
HCG11-201ENST00000411553 VPS13CQ709C8 3753 aa7.01□□□□□ -1.29
HCG11-201ENST00000411553 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.3
HCG11-201ENST00000411553 LCE3CQ5T5A8 94 aa6.94□□□□□ -1.3
HCG11-201ENST00000411553 FAT1Q14517 4588 aa6.93□□□□□ -1.3
HCG11-201ENST00000411553 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
HCG11-201ENST00000411553 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
HCG11-201ENST00000411553 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
HCG11-201ENST00000411553 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
HCG11-201ENST00000411553 LRP1BQ9NZR2 4599 aa6.76□□□□□ -1.33
HCG11-201ENST00000411553 SPRR2EP22531 72 aa6.72□□□□□ -1.33
HCG11-201ENST00000411553 SPRR2BP35325 72 aa6.72□□□□□ -1.33
HCG11-201ENST00000411553 SPRR2AP35326 72 aa6.72□□□□□ -1.33
HCG11-201ENST00000411553 FAT2Q9NYQ8 4349 aa6.72□□□□□ -1.33
HCG11-201ENST00000411553 RYR1P21817 5038 aa6.72□□□□□ -1.33
HCG11-201ENST00000411553 DNHD1Q96M86 4753 aa6.71□□□□□ -1.33
HCG11-201ENST00000411553 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.34
HCG11-201ENST00000411553 AKAP9Q99996 3911 aa6.7□□□□□ -1.34
HCG11-201ENST00000411553 SACSQ9NZJ4 4579 aa6.7□□□□□ -1.34
HCG11-201ENST00000411553 DNAH8Q96JB1 4490 aa6.64□□□□□ -1.35
HCG11-201ENST00000411553 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
HCG11-201ENST00000411553 DYNC2H1Q8NCM8 4307 aaKnown RBP6.63□□□□□ -1.35
HCG11-201ENST00000411553 DNAH3Q8TD57 4116 aa6.57□□□□□ -1.36
HCG11-201ENST00000411553 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
HCG11-201ENST00000411553 APOBP04114 4563 aaKnown RBP6.53□□□□□ -1.36
HCG11-201ENST00000411553 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
HCG11-201ENST00000411553 SPRR2DP22532 72 aa6.51□□□□□ -1.37
HCG11-201ENST00000411553 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
HCG11-201ENST00000411553 MT1XP80297 61 aa6.47□□□□□ -1.37
HCG11-201ENST00000411553 LCE2BO14633 110 aa6.46□□□□□ -1.38
HCG11-201ENST00000411553 MT1GP13640 62 aa6.44□□□□□ -1.38
HCG11-201ENST00000411553 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
HCG11-201ENST00000411553 RYR3Q15413 4870 aa6.42□□□□□ -1.38
HCG11-201ENST00000411553 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
HCG11-201ENST00000411553 MT1BP07438 61 aa6.38□□□□□ -1.39
HCG11-201ENST00000411553 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
HCG11-201ENST00000411553 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
HCG11-201ENST00000411553 ANK2Q01484 3957 aa6.36□□□□□ -1.39
HCG11-201ENST00000411553 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
HCG11-201ENST00000411553 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
HCG11-201ENST00000411553 PRKDCP78527 4128 aaKnown RBP6.27□□□□□ -1.41
HCG11-201ENST00000411553 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
HCG11-201ENST00000411553 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
HCG11-201ENST00000411553 HERC1Q15751 4861 aa6.26□□□□□ -1.41
HCG11-201ENST00000411553 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
HCG11-201ENST00000411553 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
HCG11-201ENST00000411553 KMT2AQ03164 3969 aa6.18□□□□□ -1.42
HCG11-201ENST00000411553 DNAH6Q9C0G6 4158 aa6.18□□□□□ -1.42
HCG11-201ENST00000411553 LCE3DQ9BYE3 92 aa6.17□□□□□ -1.42
HCG11-201ENST00000411553 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
HCG11-201ENST00000411553 RYR2Q92736 4967 aa6.14□□□□□ -1.43
HCG11-201ENST00000411553 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
HCG11-201ENST00000411553 MYCBP2O75592 4640 aa6.11□□□□□ -1.43
HCG11-201ENST00000411553 LYSTQ99698 3801 aa6.09□□□□□ -1.43
HCG11-201ENST00000411553 HSPG2P98160 4391 aa6.07□□□□□ -1.44
HCG11-201ENST00000411553 KIAA1109Q2LD37 5005 aa6.07□□□□□ -1.44
HCG11-201ENST00000411553 LCE3EQ5T5B0 92 aa6.07□□□□□ -1.44
HCG11-201ENST00000411553 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
HCG11-201ENST00000411553 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
HCG11-201ENST00000411553 PKD1P98161 4303 aa6.02□□□□□ -1.45
HCG11-201ENST00000411553 LCE2DQ5TA82 110 aaPredicted RBP5.97□□□□□ -1.45
HCG11-201ENST00000411553 MT1LQ93083 61 aa5.93□□□□□ -1.46
HCG11-201ENST00000411553 PKHD1L1Q86WI1 4243 aa5.9□□□□□ -1.46
HCG11-201ENST00000411553 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
HCG11-201ENST00000411553 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
HCG11-201ENST00000411553 MT1EP04732 61 aa5.88□□□□□ -1.47
HCG11-201ENST00000411553 HERC2O95714 4834 aa5.85□□□□□ -1.47
HCG11-201ENST00000411553 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
HCG11-201ENST00000411553 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
HCG11-201ENST00000411553 HECTD4Q9Y4D8 3996 aa5.77□□□□□ -1.49
HCG11-201ENST00000411553 MT3P25713 68 aa5.76□□□□□ -1.49
HCG11-201ENST00000411553 MT4P47944 62 aa5.75□□□□□ -1.49
HCG11-201ENST00000411553 MT1MQ8N339 61 aa5.73□□□□□ -1.49
HCG11-201ENST00000411553 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
HCG11-201ENST00000411553 LRP2P98164 4655 aa5.7□□□□□ -1.5
HCG11-201ENST00000411553 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
HCG11-201ENST00000411553 KRTAP9-2Q9BYQ4 174 aa5.63□□□□□ -1.51
HCG11-201ENST00000411553 EPPK1P58107 5090 aaKnown RBP5.62□□□□□ -1.51
HCG11-201ENST00000411553 LPAP08519 4548 aa5.59□□□□□ -1.52
HCG11-201ENST00000411553 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
HCG11-201ENST00000411553 LCE1BQ5T7P3 118 aa5.56□□□□□ -1.52
HCG11-201ENST00000411553 PRM1P04553 51 aa5.55□□□□□ -1.52
HCG11-201ENST00000411553 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
HCG11-201ENST00000411553 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms