RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 AKAP9Q99996 3911 aa5.56□□□□□ -1.52
DYSF-209ENST00000410041 PLECQ15149 4684 aaKnown RBP5.55□□□□□ -1.52
DYSF-209ENST00000410041 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
DYSF-209ENST00000410041 DNAH10Q8IVF4 4471 aa5.55□□□□□ -1.52
DYSF-209ENST00000410041 DNAH1Q9P2D7 4330 aa5.53□□□□□ -1.52
DYSF-209ENST00000410041 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
DYSF-209ENST00000410041 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
DYSF-209ENST00000410041 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
DYSF-209ENST00000410041 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.54
DYSF-209ENST00000410041 KRTAP4-5Q9BYR2 181 aa5.44□□□□□ -1.54
DYSF-209ENST00000410041 VPS13DQ5THJ4 4388 aa5.43□□□□□ -1.54
DYSF-209ENST00000410041 DNAH2Q9P225 4427 aa5.4□□□□□ -1.54
DYSF-209ENST00000410041 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
DYSF-209ENST00000410041 DYNC1H1Q14204 4646 aaKnown RBP5.37□□□□□ -1.55
DYSF-209ENST00000410041 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
DYSF-209ENST00000410041 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
DYSF-209ENST00000410041 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
DYSF-209ENST00000410041 FAT1Q14517 4588 aa5.31□□□□□ -1.56
DYSF-209ENST00000410041 KRTAP4-1Q9BYQ7 146 aa5.28□□□□□ -1.56
DYSF-209ENST00000410041 DNHD1Q96M86 4753 aa5.26□□□□□ -1.57
DYSF-209ENST00000410041 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
DYSF-209ENST00000410041 DNAH3Q8TD57 4116 aa5.17□□□□□ -1.58
DYSF-209ENST00000410041 RYR1P21817 5038 aa5.17□□□□□ -1.58
DYSF-209ENST00000410041 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
DYSF-209ENST00000410041 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
DYSF-209ENST00000410041 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
DYSF-209ENST00000410041 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
DYSF-209ENST00000410041 LYSTQ99698 3801 aa5.06□□□□□ -1.6
DYSF-209ENST00000410041 ANK2Q01484 3957 aa5.05□□□□□ -1.6
DYSF-209ENST00000410041 MT2AP02795 61 aa5.04□□□□□ -1.6
DYSF-209ENST00000410041 MYCBP2O75592 4640 aa5.03□□□□□ -1.6
DYSF-209ENST00000410041 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
DYSF-209ENST00000410041 MT1HP80294 61 aa5.02□□□□□ -1.61
DYSF-209ENST00000410041 KIAA1109Q2LD37 5005 aa5□□□□□ -1.61
DYSF-209ENST00000410041 KRTAP10-5P60370 271 aa4.96□□□□□ -1.61
DYSF-209ENST00000410041 MT1FP04733 61 aa4.95□□□□□ -1.62
DYSF-209ENST00000410041 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
DYSF-209ENST00000410041 VPS13BQ7Z7G8 4022 aa4.94□□□□□ -1.62
DYSF-209ENST00000410041 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
DYSF-209ENST00000410041 RYR3Q15413 4870 aa4.93□□□□□ -1.62
DYSF-209ENST00000410041 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
DYSF-209ENST00000410041 RYR2Q92736 4967 aa4.91□□□□□ -1.62
DYSF-209ENST00000410041 PRKDCP78527 4128 aaKnown RBP4.91□□□□□ -1.62
DYSF-209ENST00000410041 FAT3Q8TDW7 4589 aa4.9□□□□□ -1.63
DYSF-209ENST00000410041 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
DYSF-209ENST00000410041 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
DYSF-209ENST00000410041 KRTAP19-5Q3LI72 72 aa4.87□□□□□ -1.63
DYSF-209ENST00000410041 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
DYSF-209ENST00000410041 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
DYSF-209ENST00000410041 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
DYSF-209ENST00000410041 DNAH7Q8WXX0 4024 aa4.81□□□□□ -1.64
DYSF-209ENST00000410041 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
DYSF-209ENST00000410041 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
DYSF-209ENST00000410041 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
DYSF-209ENST00000410041 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
DYSF-209ENST00000410041 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
DYSF-209ENST00000410041 MT1XP80297 61 aa4.7□□□□□ -1.66
DYSF-209ENST00000410041 LRP2P98164 4655 aa4.66□□□□□ -1.66
DYSF-209ENST00000410041 HYDINQ4G0P3 5121 aa4.65□□□□□ -1.67
DYSF-209ENST00000410041 MT1BP07438 61 aa4.64□□□□□ -1.67
DYSF-209ENST00000410041 HERC1Q15751 4861 aa4.63□□□□□ -1.67
DYSF-209ENST00000410041 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
DYSF-209ENST00000410041 HSPG2P98160 4391 aa4.6□□□□□ -1.67
DYSF-209ENST00000410041 HERC2O95714 4834 aa4.58□□□□□ -1.68
DYSF-209ENST00000410041 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
DYSF-209ENST00000410041 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
DYSF-209ENST00000410041 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
DYSF-209ENST00000410041 KRTAP19-2Q3LHN2 52 aa4.5□□□□□ -1.69
DYSF-209ENST00000410041 PKD1P98161 4303 aa4.5□□□□□ -1.69
DYSF-209ENST00000410041 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
DYSF-209ENST00000410041 MUC17Q685J3 4493 aa4.46□□□□□ -1.7
DYSF-209ENST00000410041 PKHD1P08F94 4074 aa4.46□□□□□ -1.7
DYSF-209ENST00000410041 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
DYSF-209ENST00000410041 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
DYSF-209ENST00000410041 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
DYSF-209ENST00000410041 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
DYSF-209ENST00000410041 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
DYSF-209ENST00000410041 BIRC6Q9NR09 4857 aa4.39□□□□□ -1.71
DYSF-209ENST00000410041 MT1GP13640 62 aa4.36□□□□□ -1.71
DYSF-209ENST00000410041 SPRR2EP22531 72 aa4.34□□□□□ -1.72
DYSF-209ENST00000410041 SPRR2BP35325 72 aa4.34□□□□□ -1.72
DYSF-209ENST00000410041 SPRR2AP35326 72 aa4.34□□□□□ -1.72
DYSF-209ENST00000410041 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
DYSF-209ENST00000410041 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
DYSF-209ENST00000410041 LPAP08519 4548 aa4.31□□□□□ -1.72
DYSF-209ENST00000410041 TNXBP22105 4242 aa4.29□□□□□ -1.72
DYSF-209ENST00000410041 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
DYSF-209ENST00000410041 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
DYSF-209ENST00000410041 MT1LQ93083 61 aa4.25□□□□□ -1.73
DYSF-209ENST00000410041 LCE3DQ9BYE3 92 aa4.2□□□□□ -1.74
DYSF-209ENST00000410041 SPRR2DP22532 72 aa4.19□□□□□ -1.74
DYSF-209ENST00000410041 MT1EP04732 61 aa4.19□□□□□ -1.74
DYSF-209ENST00000410041 LCE2BO14633 110 aa4.18□□□□□ -1.74
DYSF-209ENST00000410041 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
DYSF-209ENST00000410041 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
DYSF-209ENST00000410041 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.75
DYSF-209ENST00000410041 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
DYSF-209ENST00000410041 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
DYSF-209ENST00000410041 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
DYSF-209ENST00000410041 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms