RNA–Protein interactions for RNA: ENST00000410020.7

DYSF-208, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-208ENST00000410020 AKAP9Q99996 3911 aa5.49□□□□□ -1.53
DYSF-208ENST00000410020 PLECQ15149 4684 aaKnown RBP5.48□□□□□ -1.53
DYSF-208ENST00000410020 DNAH10Q8IVF4 4471 aa5.48□□□□□ -1.53
DYSF-208ENST00000410020 ZNF469Q96JG9 3925 aaPredicted RBP5.48□□□□□ -1.53
DYSF-208ENST00000410020 DNAH1Q9P2D7 4330 aa5.47□□□□□ -1.53
DYSF-208ENST00000410020 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
DYSF-208ENST00000410020 DNAH17Q9UFH2 4485 aa5.45□□□□□ -1.54
DYSF-208ENST00000410020 KRTAP4-5Q9BYR2 181 aa5.45□□□□□ -1.54
DYSF-208ENST00000410020 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
DYSF-208ENST00000410020 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
DYSF-208ENST00000410020 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
DYSF-208ENST00000410020 VPS13DQ5THJ4 4388 aa5.38□□□□□ -1.55
DYSF-208ENST00000410020 DNAH2Q9P225 4427 aa5.34□□□□□ -1.55
DYSF-208ENST00000410020 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
DYSF-208ENST00000410020 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
DYSF-208ENST00000410020 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
DYSF-208ENST00000410020 FAT1Q14517 4588 aa5.25□□□□□ -1.57
DYSF-208ENST00000410020 SACSQ9NZJ4 4579 aa5.25□□□□□ -1.57
DYSF-208ENST00000410020 DNHD1Q96M86 4753 aa5.24□□□□□ -1.57
DYSF-208ENST00000410020 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
DYSF-208ENST00000410020 STARD9Q9P2P6 4700 aa5.2□□□□□ -1.58
DYSF-208ENST00000410020 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
DYSF-208ENST00000410020 RYR1P21817 5038 aa5.1□□□□□ -1.59
DYSF-208ENST00000410020 APOBP04114 4563 aaKnown RBP5.1□□□□□ -1.59
DYSF-208ENST00000410020 SPRR2GQ9BYE4 73 aa5.1□□□□□ -1.59
DYSF-208ENST00000410020 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.6
DYSF-208ENST00000410020 DYNC2H1Q8NCM8 4307 aaKnown RBP5.08□□□□□ -1.6
DYSF-208ENST00000410020 ANK2Q01484 3957 aa4.99□□□□□ -1.61
DYSF-208ENST00000410020 KRTAP10-5P60370 271 aa4.99□□□□□ -1.61
DYSF-208ENST00000410020 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
DYSF-208ENST00000410020 MT2AP02795 61 aa4.98□□□□□ -1.61
DYSF-208ENST00000410020 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
DYSF-208ENST00000410020 MT1HP80294 61 aa4.95□□□□□ -1.62
DYSF-208ENST00000410020 PRKDCP78527 4128 aaKnown RBP4.95□□□□□ -1.62
DYSF-208ENST00000410020 KIAA1109Q2LD37 5005 aa4.94□□□□□ -1.62
DYSF-208ENST00000410020 VPS13BQ7Z7G8 4022 aa4.9□□□□□ -1.63
DYSF-208ENST00000410020 KMT2AQ03164 3969 aa4.89□□□□□ -1.63
DYSF-208ENST00000410020 MT1FP04733 61 aa4.89□□□□□ -1.63
DYSF-208ENST00000410020 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
DYSF-208ENST00000410020 RYR3Q15413 4870 aa4.85□□□□□ -1.63
DYSF-208ENST00000410020 RYR2Q92736 4967 aa4.85□□□□□ -1.63
DYSF-208ENST00000410020 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
DYSF-208ENST00000410020 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
DYSF-208ENST00000410020 LYSTQ99698 3801 aa4.81□□□□□ -1.64
DYSF-208ENST00000410020 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
DYSF-208ENST00000410020 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
DYSF-208ENST00000410020 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
DYSF-208ENST00000410020 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
DYSF-208ENST00000410020 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
DYSF-208ENST00000410020 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
DYSF-208ENST00000410020 KRTAP17-1Q9BYP8 105 aa4.74□□□□□ -1.65
DYSF-208ENST00000410020 DNAH6Q9C0G6 4158 aa4.74□□□□□ -1.65
DYSF-208ENST00000410020 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
DYSF-208ENST00000410020 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
DYSF-208ENST00000410020 CMYA5Q8N3K9 4069 aa4.71□□□□□ -1.65
DYSF-208ENST00000410020 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
DYSF-208ENST00000410020 DNAH7Q8WXX0 4024 aa4.69□□□□□ -1.66
DYSF-208ENST00000410020 MT1XP80297 61 aa4.64□□□□□ -1.67
DYSF-208ENST00000410020 LRP2P98164 4655 aa4.61□□□□□ -1.67
DYSF-208ENST00000410020 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.67
DYSF-208ENST00000410020 MT1BP07438 61 aa4.58□□□□□ -1.68
DYSF-208ENST00000410020 HERC1Q15751 4861 aa4.56□□□□□ -1.68
DYSF-208ENST00000410020 HSPG2P98160 4391 aa4.55□□□□□ -1.68
DYSF-208ENST00000410020 HERC2O95714 4834 aa4.53□□□□□ -1.68
DYSF-208ENST00000410020 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
DYSF-208ENST00000410020 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
DYSF-208ENST00000410020 SPRR2EP22531 72 aa4.47□□□□□ -1.69
DYSF-208ENST00000410020 SPRR2BP35325 72 aa4.47□□□□□ -1.69
DYSF-208ENST00000410020 SPRR2AP35326 72 aa4.47□□□□□ -1.69
DYSF-208ENST00000410020 KMT2CQ8NEZ4 4911 aaKnown RBP4.46□□□□□ -1.7
DYSF-208ENST00000410020 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
DYSF-208ENST00000410020 PKD1P98161 4303 aa4.45□□□□□ -1.7
DYSF-208ENST00000410020 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
DYSF-208ENST00000410020 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
DYSF-208ENST00000410020 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.71
DYSF-208ENST00000410020 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
DYSF-208ENST00000410020 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
DYSF-208ENST00000410020 BIRC6Q9NR09 4857 aa4.36□□□□□ -1.71
DYSF-208ENST00000410020 PKHD1L1Q86WI1 4243 aa4.36□□□□□ -1.71
DYSF-208ENST00000410020 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
DYSF-208ENST00000410020 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
DYSF-208ENST00000410020 SPRR2DP22532 72 aa4.33□□□□□ -1.72
DYSF-208ENST00000410020 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
DYSF-208ENST00000410020 MT1GP13640 62 aa4.29□□□□□ -1.72
DYSF-208ENST00000410020 LPAP08519 4548 aa4.29□□□□□ -1.72
DYSF-208ENST00000410020 LCE2BO14633 110 aa4.29□□□□□ -1.72
DYSF-208ENST00000410020 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
DYSF-208ENST00000410020 TNXBP22105 4242 aa4.26□□□□□ -1.73
DYSF-208ENST00000410020 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
DYSF-208ENST00000410020 MT1LQ93083 61 aa4.19□□□□□ -1.74
DYSF-208ENST00000410020 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
DYSF-208ENST00000410020 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
DYSF-208ENST00000410020 MT1EP04732 61 aa4.14□□□□□ -1.75
DYSF-208ENST00000410020 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
DYSF-208ENST00000410020 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
DYSF-208ENST00000410020 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.75
DYSF-208ENST00000410020 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
DYSF-208ENST00000410020 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
DYSF-208ENST00000410020 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
DYSF-208ENST00000410020 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms