RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SPRR1BP22528 89 aa1.13□□□□□ -2.23
LSM5-205ENST00000409952 KMT2DO14686 5537 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 CCL22O00626 93 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 KRTAP2-3P0C7H8 128 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 SPINK6Q6UWN8 80 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 KRTAP2-4Q9BYR9 128 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 DNAH3Q8TD57 4116 aa1.12□□□□□ -2.23
LSM5-205ENST00000409952 ATXN8Q156A1 80 aa1.11□□□□□ -2.23
LSM5-205ENST00000409952 DNAH6Q9C0G6 4158 aa1.11□□□□□ -2.23
LSM5-205ENST00000409952 A0A087WWC5 75 aa1.1□□□□□ -2.23
LSM5-205ENST00000409952 NDUFA4O00483 81 aa1.1□□□□□ -2.23
LSM5-205ENST00000409952 MUC5BQ9HC84 5762 aaPredicted RBP1.1□□□□□ -2.23
LSM5-205ENST00000409952 DNAH11Q96DT5 4516 aa1.1□□□□□ -2.23
LSM5-205ENST00000409952 APOBP04114 4563 aaKnown RBP1.09□□□□□ -2.24
LSM5-205ENST00000409952 TNCP24821 2201 aa1.08□□□□□ -2.24
LSM5-205ENST00000409952 FAT3Q8TDW7 4589 aa1.08□□□□□ -2.24
LSM5-205ENST00000409952 DEFB104AQ8WTQ1 72 aa1.08□□□□□ -2.24
LSM5-205ENST00000409952 GNG13Q9P2W3 67 aa1.08□□□□□ -2.24
LSM5-205ENST00000409952 VPS13BQ7Z7G8 4022 aa1.08□□□□□ -2.24
LSM5-205ENST00000409952 FAT1Q14517 4588 aa1.07□□□□□ -2.24
LSM5-205ENST00000409952 DEFB105AQ8NG35 78 aa1.07□□□□□ -2.24
LSM5-205ENST00000409952 APLNQ9ULZ1 77 aa1.07□□□□□ -2.24
LSM5-205ENST00000409952 DSTQ03001 7570 aaKnown RBP1.07□□□□□ -2.24
LSM5-205ENST00000409952 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
LSM5-205ENST00000409952 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
LSM5-205ENST00000409952 COX6B2Q6YFQ2 88 aa1.06□□□□□ -2.24
LSM5-205ENST00000409952 VPS13DQ5THJ4 4388 aa1.05□□□□□ -2.24
LSM5-205ENST00000409952 LRP1Q07954 4544 aaKnown RBP1.05□□□□□ -2.24
LSM5-205ENST00000409952 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
LSM5-205ENST00000409952 PKD1P98161 4303 aa1.04□□□□□ -2.24
LSM5-205ENST00000409952 PRH1P02810 166 aa1.04□□□□□ -2.24
LSM5-205ENST00000409952 LYNX1G3V0Z9 82 aa1.03□□□□□ -2.24
LSM5-205ENST00000409952 SMR3BP02814 79 aaPredicted RBP1.03□□□□□ -2.24
LSM5-205ENST00000409952 ENHOQ6UWT2 76 aa1.03□□□□□ -2.24
LSM5-205ENST00000409952 S100ZQ8WXG8 99 aa1.03□□□□□ -2.24
LSM5-205ENST00000409952 DNAH2Q9P225 4427 aa1.03□□□□□ -2.24
LSM5-205ENST00000409952 DNAH5Q8TE73 4624 aa1.02□□□□□ -2.25
LSM5-205ENST00000409952 DEFB108AA8MXU0 73 aa1.02□□□□□ -2.25
LSM5-205ENST00000409952 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
LSM5-205ENST00000409952 FXYD6Q9H0Q3 95 aa1.02□□□□□ -2.25
LSM5-205ENST00000409952 CDKN2A-AS1Q9UH64 79 aa1.02□□□□□ -2.25
LSM5-205ENST00000409952 SPINK4O60575 86 aa1.01□□□□□ -2.25
LSM5-205ENST00000409952 C3orf79P0CE67 100 aa1.01□□□□□ -2.25
LSM5-205ENST00000409952 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
LSM5-205ENST00000409952 DNAH17Q9UFH2 4485 aa0.99□□□□□ -2.25
LSM5-205ENST00000409952 NDUFA3O95167 84 aa0.99□□□□□ -2.25
LSM5-205ENST00000409952 KLK9Q2XQG4 91 aa0.99□□□□□ -2.25
LSM5-205ENST00000409952 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
LSM5-205ENST00000409952 SPINK1P00995 79 aa0.98□□□□□ -2.25
LSM5-205ENST00000409952 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
LSM5-205ENST00000409952 UBL5Q9BZL1 73 aa0.97□□□□□ -2.25
LSM5-205ENST00000409952 KCNQ1DNQ9H478 68 aa0.97□□□□□ -2.25
LSM5-205ENST00000409952 TNXBP22105 4242 aa0.96□□□□□ -2.26
LSM5-205ENST00000409952 SFTA3P0C7M3 94 aa0.95□□□□□ -2.26
LSM5-205ENST00000409952 DEFB131BA0A096LNP1 70 aa0.94□□□□□ -2.26
LSM5-205ENST00000409952 LINC01549A6NIU2 74 aa0.94□□□□□ -2.26
LSM5-205ENST00000409952 MRPL33O75394 65 aaKnown RBP0.94□□□□□ -2.26
LSM5-205ENST00000409952 M0R2T5 61 aa0.93□□□□□ -2.26
LSM5-205ENST00000409952 WFDC13Q8IUB5 93 aa0.93□□□□□ -2.26
LSM5-205ENST00000409952 MT1HL1P0DM35 61 aa0.9□□□□□ -2.27
LSM5-205ENST00000409952 SPRR2EP22531 72 aa0.9□□□□□ -2.27
LSM5-205ENST00000409952 SPRR2BP35325 72 aa0.9□□□□□ -2.27
LSM5-205ENST00000409952 SPRR2AP35326 72 aa0.9□□□□□ -2.27
LSM5-205ENST00000409952 LPAP08519 4548 aa0.9□□□□□ -2.27
LSM5-205ENST00000409952 ETDCA0A1B0GVM5 59 aa0.89□□□□□ -2.27
LSM5-205ENST00000409952 SPRR2DP22532 72 aa0.89□□□□□ -2.27
LSM5-205ENST00000409952 DEFB114Q30KQ6 69 aa0.89□□□□□ -2.27
LSM5-205ENST00000409952 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
LSM5-205ENST00000409952 LINC00158P58513 81 aa0.88□□□□□ -2.27
LSM5-205ENST00000409952 H3BSH0 61 aa0.87□□□□□ -2.27
LSM5-205ENST00000409952 CRIP1P50238 77 aa0.86□□□□□ -2.27
LSM5-205ENST00000409952 DEFB108BQ8NET1 73 aa0.86□□□□□ -2.27
LSM5-205ENST00000409952 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
LSM5-205ENST00000409952 DNAH8Q96JB1 4490 aa0.83□□□□□ -2.28
LSM5-205ENST00000409952 H0YAA0 97 aa0.83□□□□□ -2.28
LSM5-205ENST00000409952 MT1HP80294 61 aa0.83□□□□□ -2.28
LSM5-205ENST00000409952 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
LSM5-205ENST00000409952 MUC17Q685J3 4493 aa0.81□□□□□ -2.28
LSM5-205ENST00000409952 H3BUX3 64 aa0.81□□□□□ -2.28
LSM5-205ENST00000409952 SPRR2FQ96RM1 72 aa0.8□□□□□ -2.28
LSM5-205ENST00000409952 MT4P47944 62 aa0.79□□□□□ -2.28
LSM5-205ENST00000409952 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
LSM5-205ENST00000409952 K7EMI3 77 aa0.78□□□□□ -2.28
LSM5-205ENST00000409952 COX14Q96I36 57 aa0.78□□□□□ -2.28
LSM5-205ENST00000409952 DEFB136Q30KP8 78 aa0.77□□□□□ -2.29
LSM5-205ENST00000409952 DEFB135Q30KP9 77 aa0.77□□□□□ -2.29
LSM5-205ENST00000409952 FCER1GP30273 86 aa0.75□□□□□ -2.29
LSM5-205ENST00000409952 NCBP2-AS2Q69YL0 99 aa0.74□□□□□ -2.29
LSM5-205ENST00000409952 NMES1Q9C002 83 aa0.74□□□□□ -2.29
LSM5-205ENST00000409952 SERF2P84101 59 aa0.73□□□□□ -2.29
LSM5-205ENST00000409952 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
LSM5-205ENST00000409952 M0R1W7 72 aa0.72□□□□□ -2.29
LSM5-205ENST00000409952 DEFB4AO15263 64 aa0.72□□□□□ -2.29
LSM5-205ENST00000409952 DEFB130BP0DP73 79 aa0.72□□□□□ -2.29
LSM5-205ENST00000409952 DEFB130AP0DP74 79 aa0.72□□□□□ -2.29
LSM5-205ENST00000409952 IAPPP10997 89 aa0.72□□□□□ -2.29
LSM5-205ENST00000409952 H0YGG7 62 aa0.71□□□□□ -2.3
LSM5-205ENST00000409952 HTN3P15516 51 aa0.7□□□□□ -2.3
LSM5-205ENST00000409952 PRM1P04553 51 aa0.68□□□□□ -2.3
LSM5-205ENST00000409952 MINOS1Q5TGZ0 78 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms