RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
SSFA2-202ENST00000409001 DNAH10Q8IVF4 4471 aa6.97□□□□□ -1.29
SSFA2-202ENST00000409001 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.3
SSFA2-202ENST00000409001 DNHD1Q96M86 4753 aa6.93□□□□□ -1.3
SSFA2-202ENST00000409001 FAT1Q14517 4588 aa6.83□□□□□ -1.32
SSFA2-202ENST00000409001 KRTAP10-12P60413 245 aa6.81□□□□□ -1.32
SSFA2-202ENST00000409001 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
SSFA2-202ENST00000409001 DNAH17Q9UFH2 4485 aa6.77□□□□□ -1.33
SSFA2-202ENST00000409001 DNAH8Q96JB1 4490 aa6.77□□□□□ -1.33
SSFA2-202ENST00000409001 ALMS1Q8TCU4 4167 aa6.76□□□□□ -1.33
SSFA2-202ENST00000409001 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
SSFA2-202ENST00000409001 DYNC1H1Q14204 4646 aaKnown RBP6.72□□□□□ -1.33
SSFA2-202ENST00000409001 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
SSFA2-202ENST00000409001 DNAH2Q9P225 4427 aa6.71□□□□□ -1.33
SSFA2-202ENST00000409001 LCE3AQ5TA76 89 aa6.71□□□□□ -1.34
SSFA2-202ENST00000409001 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
SSFA2-202ENST00000409001 KRTAP23-1A1A580 65 aa6.66□□□□□ -1.34
SSFA2-202ENST00000409001 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.35
SSFA2-202ENST00000409001 INE1O15225 51 aa6.63□□□□□ -1.35
SSFA2-202ENST00000409001 RYR1P21817 5038 aa6.62□□□□□ -1.35
SSFA2-202ENST00000409001 MYCBP2O75592 4640 aa6.56□□□□□ -1.36
SSFA2-202ENST00000409001 PRKDCP78527 4128 aaKnown RBP6.56□□□□□ -1.36
SSFA2-202ENST00000409001 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
SSFA2-202ENST00000409001 ANK2Q01484 3957 aa6.53□□□□□ -1.36
SSFA2-202ENST00000409001 LYSTQ99698 3801 aa6.53□□□□□ -1.36
SSFA2-202ENST00000409001 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.36
SSFA2-202ENST00000409001 KMT2AQ03164 3969 aa6.52□□□□□ -1.36
SSFA2-202ENST00000409001 DNAH3Q8TD57 4116 aa6.46□□□□□ -1.37
SSFA2-202ENST00000409001 APOBP04114 4563 aaKnown RBP6.45□□□□□ -1.38
SSFA2-202ENST00000409001 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
SSFA2-202ENST00000409001 VPS13BQ7Z7G8 4022 aa6.43□□□□□ -1.38
SSFA2-202ENST00000409001 FAT2Q9NYQ8 4349 aa6.41□□□□□ -1.38
SSFA2-202ENST00000409001 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
SSFA2-202ENST00000409001 MT1HP80294 61 aa6.32□□□□□ -1.4
SSFA2-202ENST00000409001 FRAS1Q86XX4 4008 aa6.3□□□□□ -1.4
SSFA2-202ENST00000409001 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
SSFA2-202ENST00000409001 MT2AP02795 61 aa6.3□□□□□ -1.4
SSFA2-202ENST00000409001 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
SSFA2-202ENST00000409001 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
SSFA2-202ENST00000409001 RYR3Q15413 4870 aa6.24□□□□□ -1.41
SSFA2-202ENST00000409001 DNAH6Q9C0G6 4158 aa6.22□□□□□ -1.41
SSFA2-202ENST00000409001 CMYA5Q8N3K9 4069 aa6.21□□□□□ -1.41
SSFA2-202ENST00000409001 MT1FP04733 61 aa6.21□□□□□ -1.41
SSFA2-202ENST00000409001 KRTAP17-1Q9BYP8 105 aa6.21□□□□□ -1.42
SSFA2-202ENST00000409001 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
SSFA2-202ENST00000409001 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
SSFA2-202ENST00000409001 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
SSFA2-202ENST00000409001 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
SSFA2-202ENST00000409001 LRP2P98164 4655 aa6.06□□□□□ -1.44
SSFA2-202ENST00000409001 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
SSFA2-202ENST00000409001 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
SSFA2-202ENST00000409001 RYR2Q92736 4967 aa5.99□□□□□ -1.45
SSFA2-202ENST00000409001 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
SSFA2-202ENST00000409001 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
SSFA2-202ENST00000409001 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
SSFA2-202ENST00000409001 HERC2O95714 4834 aa5.91□□□□□ -1.46
SSFA2-202ENST00000409001 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
SSFA2-202ENST00000409001 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
SSFA2-202ENST00000409001 MT1XP80297 61 aa5.78□□□□□ -1.48
SSFA2-202ENST00000409001 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
SSFA2-202ENST00000409001 HSPG2P98160 4391 aa5.76□□□□□ -1.49
SSFA2-202ENST00000409001 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
SSFA2-202ENST00000409001 MT1BP07438 61 aa5.74□□□□□ -1.49
SSFA2-202ENST00000409001 SPRR2FQ96RM1 72 aa5.73□□□□□ -1.49
SSFA2-202ENST00000409001 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
SSFA2-202ENST00000409001 LPAP08519 4548 aa5.71□□□□□ -1.5
SSFA2-202ENST00000409001 PKD1P98161 4303 aa5.7□□□□□ -1.5
SSFA2-202ENST00000409001 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
SSFA2-202ENST00000409001 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
SSFA2-202ENST00000409001 PCLOQ9Y6V0 5065 aa5.66□□□□□ -1.5
SSFA2-202ENST00000409001 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SSFA2-202ENST00000409001 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
SSFA2-202ENST00000409001 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
SSFA2-202ENST00000409001 HERC1Q15751 4861 aa5.56□□□□□ -1.52
SSFA2-202ENST00000409001 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
SSFA2-202ENST00000409001 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
SSFA2-202ENST00000409001 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
SSFA2-202ENST00000409001 MT1GP13640 62 aa5.44□□□□□ -1.54
SSFA2-202ENST00000409001 TNXBP22105 4242 aa5.44□□□□□ -1.54
SSFA2-202ENST00000409001 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
SSFA2-202ENST00000409001 ABCA13Q86UQ4 5058 aa5.4□□□□□ -1.55
SSFA2-202ENST00000409001 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
SSFA2-202ENST00000409001 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
SSFA2-202ENST00000409001 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
SSFA2-202ENST00000409001 FLGP20930 4061 aaPredicted RBP5.37□□□□□ -1.55
SSFA2-202ENST00000409001 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
SSFA2-202ENST00000409001 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
SSFA2-202ENST00000409001 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
SSFA2-202ENST00000409001 LCE2BO14633 110 aa5.32□□□□□ -1.56
SSFA2-202ENST00000409001 SPRR2EP22531 72 aa5.23□□□□□ -1.57
SSFA2-202ENST00000409001 SPRR2BP35325 72 aa5.23□□□□□ -1.57
SSFA2-202ENST00000409001 SPRR2AP35326 72 aa5.23□□□□□ -1.57
SSFA2-202ENST00000409001 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
SSFA2-202ENST00000409001 MT1LQ93083 61 aa5.2□□□□□ -1.58
SSFA2-202ENST00000409001 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
SSFA2-202ENST00000409001 MT1EP04732 61 aa5.15□□□□□ -1.58
SSFA2-202ENST00000409001 HMCN2Q8NDA2 5059 aa5.13□□□□□ -1.59
SSFA2-202ENST00000409001 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
SSFA2-202ENST00000409001 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
SSFA2-202ENST00000409001 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms