RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
DDX3X-201ENST00000399959 VPS13CQ709C8 3753 aa5.39□□□□□ -1.55
DDX3X-201ENST00000399959 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
DDX3X-201ENST00000399959 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
DDX3X-201ENST00000399959 DNAH10Q8IVF4 4471 aa5.35□□□□□ -1.55
DDX3X-201ENST00000399959 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
DDX3X-201ENST00000399959 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
DDX3X-201ENST00000399959 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
DDX3X-201ENST00000399959 BSNQ9UPA5 3926 aa5.29□□□□□ -1.56
DDX3X-201ENST00000399959 DNAH1Q9P2D7 4330 aa5.25□□□□□ -1.57
DDX3X-201ENST00000399959 DNAH8Q96JB1 4490 aa5.24□□□□□ -1.57
DDX3X-201ENST00000399959 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
DDX3X-201ENST00000399959 KRTAP4-1Q9BYQ7 146 aa5.23□□□□□ -1.57
DDX3X-201ENST00000399959 DNAH5Q8TE73 4624 aa5.23□□□□□ -1.57
DDX3X-201ENST00000399959 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
DDX3X-201ENST00000399959 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.57
DDX3X-201ENST00000399959 LCE2BO14633 110 aa5.2□□□□□ -1.58
DDX3X-201ENST00000399959 DNAH9Q9NYC9 4486 aa5.17□□□□□ -1.58
DDX3X-201ENST00000399959 DNAH17Q9UFH2 4485 aa5.16□□□□□ -1.58
DDX3X-201ENST00000399959 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
DDX3X-201ENST00000399959 AKAP9Q99996 3911 aa5.14□□□□□ -1.59
DDX3X-201ENST00000399959 FAT1Q14517 4588 aa5.12□□□□□ -1.59
DDX3X-201ENST00000399959 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
DDX3X-201ENST00000399959 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
DDX3X-201ENST00000399959 PLECQ15149 4684 aaKnown RBP5.09□□□□□ -1.6
DDX3X-201ENST00000399959 MT2AP02795 61 aa5.08□□□□□ -1.6
DDX3X-201ENST00000399959 MT1HP80294 61 aa5.05□□□□□ -1.6
DDX3X-201ENST00000399959 VPS13DQ5THJ4 4388 aa5.02□□□□□ -1.61
DDX3X-201ENST00000399959 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
DDX3X-201ENST00000399959 MT1FP04733 61 aa4.99□□□□□ -1.61
DDX3X-201ENST00000399959 DNAH3Q8TD57 4116 aa4.98□□□□□ -1.61
DDX3X-201ENST00000399959 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
DDX3X-201ENST00000399959 DYNC1H1Q14204 4646 aaKnown RBP4.88□□□□□ -1.63
DDX3X-201ENST00000399959 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
DDX3X-201ENST00000399959 LRP1BQ9NZR2 4599 aa4.87□□□□□ -1.63
DDX3X-201ENST00000399959 ANK2Q01484 3957 aa4.87□□□□□ -1.63
DDX3X-201ENST00000399959 MT3P25713 68 aa4.86□□□□□ -1.63
DDX3X-201ENST00000399959 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
DDX3X-201ENST00000399959 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
DDX3X-201ENST00000399959 ZNF469Q96JG9 3925 aaPredicted RBP4.84□□□□□ -1.63
DDX3X-201ENST00000399959 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
DDX3X-201ENST00000399959 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
DDX3X-201ENST00000399959 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
DDX3X-201ENST00000399959 STARD9Q9P2P6 4700 aa4.77□□□□□ -1.65
DDX3X-201ENST00000399959 LCE3BQ5TA77 95 aa4.76□□□□□ -1.65
DDX3X-201ENST00000399959 CMYA5Q8N3K9 4069 aa4.75□□□□□ -1.65
DDX3X-201ENST00000399959 MT1XP80297 61 aa4.75□□□□□ -1.65
DDX3X-201ENST00000399959 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
DDX3X-201ENST00000399959 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
DDX3X-201ENST00000399959 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
DDX3X-201ENST00000399959 FRAS1Q86XX4 4008 aa4.68□□□□□ -1.66
DDX3X-201ENST00000399959 RYR1P21817 5038 aa4.65□□□□□ -1.66
DDX3X-201ENST00000399959 MT1GP13640 62 aa4.65□□□□□ -1.66
DDX3X-201ENST00000399959 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
DDX3X-201ENST00000399959 MT1BP07438 61 aa4.61□□□□□ -1.67
DDX3X-201ENST00000399959 MYCBP2O75592 4640 aa4.6□□□□□ -1.67
DDX3X-201ENST00000399959 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
DDX3X-201ENST00000399959 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
DDX3X-201ENST00000399959 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
DDX3X-201ENST00000399959 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
DDX3X-201ENST00000399959 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
DDX3X-201ENST00000399959 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
DDX3X-201ENST00000399959 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
DDX3X-201ENST00000399959 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
DDX3X-201ENST00000399959 HECTD4Q9Y4D8 3996 aa4.5□□□□□ -1.69
DDX3X-201ENST00000399959 LYSTQ99698 3801 aa4.46□□□□□ -1.69
DDX3X-201ENST00000399959 DNHD1Q96M86 4753 aa4.46□□□□□ -1.7
DDX3X-201ENST00000399959 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
DDX3X-201ENST00000399959 RYR3Q15413 4870 aa4.41□□□□□ -1.7
DDX3X-201ENST00000399959 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.7
DDX3X-201ENST00000399959 KRTAP17-1Q9BYP8 105 aa4.37□□□□□ -1.71
DDX3X-201ENST00000399959 PRM1P04553 51 aa4.36□□□□□ -1.71
DDX3X-201ENST00000399959 HSPG2P98160 4391 aa4.35□□□□□ -1.71
DDX3X-201ENST00000399959 MT1LQ93083 61 aa4.35□□□□□ -1.71
DDX3X-201ENST00000399959 SPRR2EP22531 72 aa4.34□□□□□ -1.72
DDX3X-201ENST00000399959 SPRR2BP35325 72 aa4.34□□□□□ -1.72
DDX3X-201ENST00000399959 SPRR2AP35326 72 aa4.34□□□□□ -1.72
DDX3X-201ENST00000399959 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
DDX3X-201ENST00000399959 RYR2Q92736 4967 aa4.3□□□□□ -1.72
DDX3X-201ENST00000399959 HERC1Q15751 4861 aa4.3□□□□□ -1.72
DDX3X-201ENST00000399959 PKD1P98161 4303 aa4.26□□□□□ -1.73
DDX3X-201ENST00000399959 MT1EP04732 61 aa4.25□□□□□ -1.73
DDX3X-201ENST00000399959 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
DDX3X-201ENST00000399959 LRP2P98164 4655 aa4.25□□□□□ -1.73
DDX3X-201ENST00000399959 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
DDX3X-201ENST00000399959 SPRR2DP22532 72 aa4.18□□□□□ -1.74
DDX3X-201ENST00000399959 KRTAP19-2Q3LHN2 52 aa4.16□□□□□ -1.74
DDX3X-201ENST00000399959 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
DDX3X-201ENST00000399959 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
DDX3X-201ENST00000399959 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
DDX3X-201ENST00000399959 HERC2O95714 4834 aa4.14□□□□□ -1.75
DDX3X-201ENST00000399959 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
DDX3X-201ENST00000399959 PKHD1L1Q86WI1 4243 aa4.12□□□□□ -1.75
DDX3X-201ENST00000399959 MT1MQ8N339 61 aa4.1□□□□□ -1.75
DDX3X-201ENST00000399959 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
DDX3X-201ENST00000399959 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
DDX3X-201ENST00000399959 LPAP08519 4548 aa4.07□□□□□ -1.76
DDX3X-201ENST00000399959 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
DDX3X-201ENST00000399959 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
DDX3X-201ENST00000399959 TNXBP22105 4242 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms