RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 MT1HP80294 61 aa3.28□□□□□ -1.88
KDM5A-201ENST00000399788 AKAP9Q99996 3911 aa3.28□□□□□ -1.88
KDM5A-201ENST00000399788 ALMS1Q8TCU4 4167 aa3.26□□□□□ -1.89
KDM5A-201ENST00000399788 VPS13CQ709C8 3753 aa3.23□□□□□ -1.89
KDM5A-201ENST00000399788 SPRR2EP22531 72 aa3.23□□□□□ -1.89
KDM5A-201ENST00000399788 SPRR2BP35325 72 aa3.23□□□□□ -1.89
KDM5A-201ENST00000399788 SPRR2AP35326 72 aa3.23□□□□□ -1.89
KDM5A-201ENST00000399788 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
KDM5A-201ENST00000399788 MT2AP02795 61 aa3.21□□□□□ -1.9
KDM5A-201ENST00000399788 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
KDM5A-201ENST00000399788 SVEP1Q4LDE5 3571 aa3.18□□□□□ -1.9
KDM5A-201ENST00000399788 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
KDM5A-201ENST00000399788 DNAH1Q9P2D7 4330 aa3.17□□□□□ -1.9
KDM5A-201ENST00000399788 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
KDM5A-201ENST00000399788 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
KDM5A-201ENST00000399788 SPRR2DP22532 72 aa3.13□□□□□ -1.91
KDM5A-201ENST00000399788 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
KDM5A-201ENST00000399788 MT1FP04733 61 aa3.11□□□□□ -1.91
KDM5A-201ENST00000399788 BSNQ9UPA5 3926 aa3.09□□□□□ -1.91
KDM5A-201ENST00000399788 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
KDM5A-201ENST00000399788 LCE2BO14633 110 aa3.09□□□□□ -1.92
KDM5A-201ENST00000399788 CMYA5Q8N3K9 4069 aa3.07□□□□□ -1.92
KDM5A-201ENST00000399788 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
KDM5A-201ENST00000399788 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
KDM5A-201ENST00000399788 DNAH2Q9P225 4427 aa2.98□□□□□ -1.93
KDM5A-201ENST00000399788 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.93
KDM5A-201ENST00000399788 DNAH9Q9NYC9 4486 aa2.95□□□□□ -1.94
KDM5A-201ENST00000399788 LYSTQ99698 3801 aa2.94□□□□□ -1.94
KDM5A-201ENST00000399788 MT1GP13640 62 aa2.94□□□□□ -1.94
KDM5A-201ENST00000399788 LCE2CQ5TA81 110 aa2.94□□□□□ -1.94
KDM5A-201ENST00000399788 DNAH10Q8IVF4 4471 aa2.93□□□□□ -1.94
KDM5A-201ENST00000399788 PLECQ15149 4684 aaKnown RBP2.93□□□□□ -1.94
KDM5A-201ENST00000399788 FAT1Q14517 4588 aa2.92□□□□□ -1.94
KDM5A-201ENST00000399788 DNAH17Q9UFH2 4485 aa2.92□□□□□ -1.94
KDM5A-201ENST00000399788 DNAH5Q8TE73 4624 aa2.91□□□□□ -1.94
KDM5A-201ENST00000399788 DNAH3Q8TD57 4116 aa2.91□□□□□ -1.94
KDM5A-201ENST00000399788 LCE2DQ5TA82 110 aaPredicted RBP2.9□□□□□ -1.94
KDM5A-201ENST00000399788 FAT2Q9NYQ8 4349 aa2.88□□□□□ -1.95
KDM5A-201ENST00000399788 VPS13BQ7Z7G8 4022 aa2.87□□□□□ -1.95
KDM5A-201ENST00000399788 KRTAP19-8Q3LI54 63 aa2.87□□□□□ -1.95
KDM5A-201ENST00000399788 ANK2Q01484 3957 aa2.87□□□□□ -1.95
KDM5A-201ENST00000399788 ZNF469Q96JG9 3925 aaPredicted RBP2.86□□□□□ -1.95
KDM5A-201ENST00000399788 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
KDM5A-201ENST00000399788 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
KDM5A-201ENST00000399788 HECTD4Q9Y4D8 3996 aa2.84□□□□□ -1.95
KDM5A-201ENST00000399788 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
KDM5A-201ENST00000399788 DNAH11Q96DT5 4516 aa2.83□□□□□ -1.96
KDM5A-201ENST00000399788 DNAH6Q9C0G6 4158 aa2.81□□□□□ -1.96
KDM5A-201ENST00000399788 MT1XP80297 61 aa2.8□□□□□ -1.96
KDM5A-201ENST00000399788 DNAH8Q96JB1 4490 aa2.8□□□□□ -1.96
KDM5A-201ENST00000399788 MT4P47944 62 aa2.79□□□□□ -1.96
KDM5A-201ENST00000399788 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
KDM5A-201ENST00000399788 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
KDM5A-201ENST00000399788 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.97
KDM5A-201ENST00000399788 LRP1Q07954 4544 aaKnown RBP2.77□□□□□ -1.97
KDM5A-201ENST00000399788 FRAS1Q86XX4 4008 aa2.77□□□□□ -1.97
KDM5A-201ENST00000399788 KMT2AQ03164 3969 aa2.76□□□□□ -1.97
KDM5A-201ENST00000399788 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
KDM5A-201ENST00000399788 DYNC2H1Q8NCM8 4307 aaKnown RBP2.75□□□□□ -1.97
KDM5A-201ENST00000399788 MT1BP07438 61 aa2.74□□□□□ -1.97
KDM5A-201ENST00000399788 KRTAP9-8Q9BYQ0 159 aa2.73□□□□□ -1.97
KDM5A-201ENST00000399788 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
KDM5A-201ENST00000399788 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.98
KDM5A-201ENST00000399788 VPS13DQ5THJ4 4388 aa2.7□□□□□ -1.98
KDM5A-201ENST00000399788 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
KDM5A-201ENST00000399788 APOBP04114 4563 aaKnown RBP2.7□□□□□ -1.98
KDM5A-201ENST00000399788 KRTAP17-1Q9BYP8 105 aa2.7□□□□□ -1.98
KDM5A-201ENST00000399788 PRKDCP78527 4128 aaKnown RBP2.69□□□□□ -1.98
KDM5A-201ENST00000399788 KRTAP9-3Q9BYQ3 159 aa2.68□□□□□ -1.98
KDM5A-201ENST00000399788 KRTAP9-2Q9BYQ4 174 aa2.68□□□□□ -1.98
KDM5A-201ENST00000399788 MT3P25713 68 aa2.67□□□□□ -1.98
KDM5A-201ENST00000399788 FAT3Q8TDW7 4589 aa2.67□□□□□ -1.98
KDM5A-201ENST00000399788 LCE1DQ5T752 114 aa2.67□□□□□ -1.98
KDM5A-201ENST00000399788 RYR1P21817 5038 aa2.65□□□□□ -1.99
KDM5A-201ENST00000399788 MT1LQ93083 61 aa2.64□□□□□ -1.99
KDM5A-201ENST00000399788 DYNC1H1Q14204 4646 aaKnown RBP2.62□□□□□ -1.99
KDM5A-201ENST00000399788 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
KDM5A-201ENST00000399788 STARD9Q9P2P6 4700 aa2.61□□□□□ -1.99
KDM5A-201ENST00000399788 DNHD1Q96M86 4753 aa2.6□□□□□ -1.99
KDM5A-201ENST00000399788 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
KDM5A-201ENST00000399788 MT1EP04732 61 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 PKHD1L1Q86WI1 4243 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 PKD1P98161 4303 aa2.57□□□□□ -2
KDM5A-201ENST00000399788 MT1MQ8N339 61 aa2.54□□□□□ -2
KDM5A-201ENST00000399788 PRM1P04553 51 aa2.53□□□□□ -2
KDM5A-201ENST00000399788 KRTAP19-6Q3LI70 58 aa2.52□□□□□ -2.01
KDM5A-201ENST00000399788 MYCBP2O75592 4640 aa2.5□□□□□ -2.01
KDM5A-201ENST00000399788 PKHD1P08F94 4074 aa2.48□□□□□ -2.01
KDM5A-201ENST00000399788 KRTAP9-7A8MTY7 169 aa2.46□□□□□ -2.01
KDM5A-201ENST00000399788 LOC100996750A0A140TA64 210 aa2.46□□□□□ -2.02
KDM5A-201ENST00000399788 RYR3Q15413 4870 aa2.45□□□□□ -2.02
KDM5A-201ENST00000399788 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
KDM5A-201ENST00000399788 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
KDM5A-201ENST00000399788 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
KDM5A-201ENST00000399788 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
KDM5A-201ENST00000399788 LCE1AQ5T7P2 110 aa2.43□□□□□ -2.02
KDM5A-201ENST00000399788 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms