RNA–Protein interactions for RNA: ENST00000399586.2

TTC3P1-201, Transcript of tetratricopeptide repeat domain 3 pseudogene 1, humanhuman

BASIC

Gene TTC3P1, Length 6,081 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P1-201ENST00000399586 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
TTC3P1-201ENST00000399586 HUWE1Q7Z6Z7 4374 aaKnown RBP3.25□□□□□ -1.89
TTC3P1-201ENST00000399586 ALMS1Q8TCU4 4167 aa3.22□□□□□ -1.89
TTC3P1-201ENST00000399586 MT1HP80294 61 aa3.18□□□□□ -1.9
TTC3P1-201ENST00000399586 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
TTC3P1-201ENST00000399586 SPRR2EP22531 72 aa3.15□□□□□ -1.91
TTC3P1-201ENST00000399586 SPRR2BP35325 72 aa3.15□□□□□ -1.91
TTC3P1-201ENST00000399586 SPRR2AP35326 72 aa3.15□□□□□ -1.91
TTC3P1-201ENST00000399586 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
TTC3P1-201ENST00000399586 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
TTC3P1-201ENST00000399586 CSMD3Q7Z407 3707 aa3.1□□□□□ -1.91
TTC3P1-201ENST00000399586 MT2AP02795 61 aa3.1□□□□□ -1.91
TTC3P1-201ENST00000399586 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
TTC3P1-201ENST00000399586 VPS13CQ709C8 3753 aa3.05□□□□□ -1.92
TTC3P1-201ENST00000399586 SPRR2DP22532 72 aa3.04□□□□□ -1.92
TTC3P1-201ENST00000399586 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
TTC3P1-201ENST00000399586 MT1FP04733 61 aa3.04□□□□□ -1.92
TTC3P1-201ENST00000399586 BSNQ9UPA5 3926 aa3.02□□□□□ -1.93
TTC3P1-201ENST00000399586 DNAH9Q9NYC9 4486 aa3.01□□□□□ -1.93
TTC3P1-201ENST00000399586 SPRR2GQ9BYE4 73 aa2.99□□□□□ -1.93
TTC3P1-201ENST00000399586 DNHD1Q96M86 4753 aa2.98□□□□□ -1.93
TTC3P1-201ENST00000399586 DNAH2Q9P225 4427 aa2.98□□□□□ -1.93
TTC3P1-201ENST00000399586 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
TTC3P1-201ENST00000399586 MT1GP13640 62 aa2.98□□□□□ -1.93
TTC3P1-201ENST00000399586 DNAH10Q8IVF4 4471 aa2.97□□□□□ -1.93
TTC3P1-201ENST00000399586 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
TTC3P1-201ENST00000399586 LCE2BO14633 110 aa2.96□□□□□ -1.94
TTC3P1-201ENST00000399586 AKAP9Q99996 3911 aa2.94□□□□□ -1.94
TTC3P1-201ENST00000399586 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
TTC3P1-201ENST00000399586 FAT1Q14517 4588 aa2.92□□□□□ -1.94
TTC3P1-201ENST00000399586 DNAH11Q96DT5 4516 aa2.9□□□□□ -1.95
TTC3P1-201ENST00000399586 ZNF469Q96JG9 3925 aaPredicted RBP2.86□□□□□ -1.95
TTC3P1-201ENST00000399586 DNAH8Q96JB1 4490 aa2.85□□□□□ -1.95
TTC3P1-201ENST00000399586 DNAH17Q9UFH2 4485 aa2.84□□□□□ -1.95
TTC3P1-201ENST00000399586 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
TTC3P1-201ENST00000399586 LRP1BQ9NZR2 4599 aa2.83□□□□□ -1.96
TTC3P1-201ENST00000399586 RYR1P21817 5038 aa2.83□□□□□ -1.96
TTC3P1-201ENST00000399586 LCE2CQ5TA81 110 aa2.83□□□□□ -1.96
TTC3P1-201ENST00000399586 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
TTC3P1-201ENST00000399586 FAT2Q9NYQ8 4349 aa2.81□□□□□ -1.96
TTC3P1-201ENST00000399586 KRTAP17-1Q9BYP8 105 aa2.8□□□□□ -1.96
TTC3P1-201ENST00000399586 LCE2DQ5TA82 110 aaPredicted RBP2.8□□□□□ -1.96
TTC3P1-201ENST00000399586 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
TTC3P1-201ENST00000399586 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
TTC3P1-201ENST00000399586 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
TTC3P1-201ENST00000399586 SACSQ9NZJ4 4579 aa2.79□□□□□ -1.96
TTC3P1-201ENST00000399586 MT4P47944 62 aa2.77□□□□□ -1.97
TTC3P1-201ENST00000399586 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
TTC3P1-201ENST00000399586 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
TTC3P1-201ENST00000399586 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
TTC3P1-201ENST00000399586 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
TTC3P1-201ENST00000399586 STARD9Q9P2P6 4700 aa2.75□□□□□ -1.97
TTC3P1-201ENST00000399586 KRTAP19-1Q8IUB9 90 aa2.74□□□□□ -1.97
TTC3P1-201ENST00000399586 ANK2Q01484 3957 aa2.74□□□□□ -1.97
TTC3P1-201ENST00000399586 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
TTC3P1-201ENST00000399586 MT1XP80297 61 aa2.73□□□□□ -1.97
TTC3P1-201ENST00000399586 DNAH3Q8TD57 4116 aa2.73□□□□□ -1.97
TTC3P1-201ENST00000399586 DYNC2H1Q8NCM8 4307 aaKnown RBP2.73□□□□□ -1.97
TTC3P1-201ENST00000399586 PRKDCP78527 4128 aaKnown RBP2.72□□□□□ -1.97
TTC3P1-201ENST00000399586 RYR3Q15413 4870 aa2.71□□□□□ -1.97
TTC3P1-201ENST00000399586 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
TTC3P1-201ENST00000399586 KRTAP19-8Q3LI54 63 aa2.68□□□□□ -1.98
TTC3P1-201ENST00000399586 KRTAP4-7Q9BYR0 210 aa2.67□□□□□ -1.98
TTC3P1-201ENST00000399586 KMT2AQ03164 3969 aa2.66□□□□□ -1.98
TTC3P1-201ENST00000399586 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
TTC3P1-201ENST00000399586 LYSTQ99698 3801 aa2.65□□□□□ -1.99
TTC3P1-201ENST00000399586 MT1BP07438 61 aa2.64□□□□□ -1.99
TTC3P1-201ENST00000399586 FRAS1Q86XX4 4008 aa2.64□□□□□ -1.99
TTC3P1-201ENST00000399586 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
TTC3P1-201ENST00000399586 DNAH7Q8WXX0 4024 aa2.63□□□□□ -1.99
TTC3P1-201ENST00000399586 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
TTC3P1-201ENST00000399586 CMYA5Q8N3K9 4069 aa2.63□□□□□ -1.99
TTC3P1-201ENST00000399586 PRM1P04553 51 aa2.62□□□□□ -1.99
TTC3P1-201ENST00000399586 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
TTC3P1-201ENST00000399586 DNAH6Q9C0G6 4158 aa2.61□□□□□ -1.99
TTC3P1-201ENST00000399586 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
TTC3P1-201ENST00000399586 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
TTC3P1-201ENST00000399586 KRTAP9-8Q9BYQ0 159 aa2.6□□□□□ -1.99
TTC3P1-201ENST00000399586 KIAA1109Q2LD37 5005 aa2.6□□□□□ -1.99
TTC3P1-201ENST00000399586 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
TTC3P1-201ENST00000399586 KRTAP9-2Q9BYQ4 174 aa2.56□□□□□ -2
TTC3P1-201ENST00000399586 MT3P25713 68 aa2.56□□□□□ -2
TTC3P1-201ENST00000399586 KRTAP9-3Q9BYQ3 159 aa2.55□□□□□ -2
TTC3P1-201ENST00000399586 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
TTC3P1-201ENST00000399586 HERC2O95714 4834 aa2.54□□□□□ -2
TTC3P1-201ENST00000399586 MT1LQ93083 61 aa2.52□□□□□ -2.01
TTC3P1-201ENST00000399586 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
TTC3P1-201ENST00000399586 RYR2Q92736 4967 aa2.51□□□□□ -2.01
TTC3P1-201ENST00000399586 HERC1Q15751 4861 aa2.5□□□□□ -2.01
TTC3P1-201ENST00000399586 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
TTC3P1-201ENST00000399586 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
TTC3P1-201ENST00000399586 HSPG2P98160 4391 aa2.49□□□□□ -2.01
TTC3P1-201ENST00000399586 PKD1P98161 4303 aa2.49□□□□□ -2.01
TTC3P1-201ENST00000399586 KRTAP9-6A0A140TA67 174 aa2.48□□□□□ -2.01
TTC3P1-201ENST00000399586 MT1EP04732 61 aa2.48□□□□□ -2.01
TTC3P1-201ENST00000399586 HYDINQ4G0P3 5121 aa2.47□□□□□ -2.01
TTC3P1-201ENST00000399586 MT1MQ8N339 61 aa2.46□□□□□ -2.02
TTC3P1-201ENST00000399586 LPAP08519 4548 aa2.45□□□□□ -2.02
TTC3P1-201ENST00000399586 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
TTC3P1-201ENST00000399586 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms