RNA–Protein interactions for RNA: ENST00000398532.8

MSL1-202, Transcript of male specific lethal 1 homolog, humanhuman

TSL 1 (best) BASIC

Gene MSL1, Length 4,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-202ENST00000398532 DNAH1Q9P2D7 4330 aa8.45□□□□□ -1.06
MSL1-202ENST00000398532 DNAH10Q8IVF4 4471 aa8.42□□□□□ -1.06
MSL1-202ENST00000398532 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
MSL1-202ENST00000398532 FAT1Q14517 4588 aa8.22□□□□□ -1.09
MSL1-202ENST00000398532 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
MSL1-202ENST00000398532 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
MSL1-202ENST00000398532 ALMS1Q8TCU4 4167 aa8.18□□□□□ -1.1
MSL1-202ENST00000398532 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
MSL1-202ENST00000398532 LRP1BQ9NZR2 4599 aa8.11□□□□□ -1.11
MSL1-202ENST00000398532 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
MSL1-202ENST00000398532 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
MSL1-202ENST00000398532 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
MSL1-202ENST00000398532 DNAH2Q9P225 4427 aa8.05□□□□□ -1.12
MSL1-202ENST00000398532 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
MSL1-202ENST00000398532 RYR1P21817 5038 aa7.96□□□□□ -1.13
MSL1-202ENST00000398532 KMT2AQ03164 3969 aa7.95□□□□□ -1.14
MSL1-202ENST00000398532 LYSTQ99698 3801 aa7.89□□□□□ -1.15
MSL1-202ENST00000398532 ANK2Q01484 3957 aa7.87□□□□□ -1.15
MSL1-202ENST00000398532 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
MSL1-202ENST00000398532 MYCBP2O75592 4640 aa7.86□□□□□ -1.15
MSL1-202ENST00000398532 DNAH3Q8TD57 4116 aa7.86□□□□□ -1.15
MSL1-202ENST00000398532 SACSQ9NZJ4 4579 aa7.85□□□□□ -1.15
MSL1-202ENST00000398532 DYNC2H1Q8NCM8 4307 aaKnown RBP7.83□□□□□ -1.16
MSL1-202ENST00000398532 KRTAP10-12P60413 245 aa7.83□□□□□ -1.16
MSL1-202ENST00000398532 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
MSL1-202ENST00000398532 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
MSL1-202ENST00000398532 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
MSL1-202ENST00000398532 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.17
MSL1-202ENST00000398532 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
MSL1-202ENST00000398532 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
MSL1-202ENST00000398532 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
MSL1-202ENST00000398532 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
MSL1-202ENST00000398532 RYR3Q15413 4870 aa7.61□□□□□ -1.19
MSL1-202ENST00000398532 FRAS1Q86XX4 4008 aa7.6□□□□□ -1.19
MSL1-202ENST00000398532 DNAH6Q9C0G6 4158 aa7.58□□□□□ -1.2
MSL1-202ENST00000398532 FAT3Q8TDW7 4589 aa7.58□□□□□ -1.2
MSL1-202ENST00000398532 CMYA5Q8N3K9 4069 aa7.55□□□□□ -1.2
MSL1-202ENST00000398532 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
MSL1-202ENST00000398532 HECTD4Q9Y4D8 3996 aa7.5□□□□□ -1.21
MSL1-202ENST00000398532 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
MSL1-202ENST00000398532 MT1HP80294 61 aa7.46□□□□□ -1.22
MSL1-202ENST00000398532 MT2AP02795 61 aa7.41□□□□□ -1.22
MSL1-202ENST00000398532 INE1O15225 51 aa7.4□□□□□ -1.23
MSL1-202ENST00000398532 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
MSL1-202ENST00000398532 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
MSL1-202ENST00000398532 HYDINQ4G0P3 5121 aa7.36□□□□□ -1.23
MSL1-202ENST00000398532 MT1FP04733 61 aa7.31□□□□□ -1.24
MSL1-202ENST00000398532 LRP2P98164 4655 aa7.3□□□□□ -1.24
MSL1-202ENST00000398532 RYR2Q92736 4967 aa7.3□□□□□ -1.24
MSL1-202ENST00000398532 PKHD1P08F94 4074 aa7.29□□□□□ -1.24
MSL1-202ENST00000398532 HERC2O95714 4834 aa7.21□□□□□ -1.25
MSL1-202ENST00000398532 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
MSL1-202ENST00000398532 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
MSL1-202ENST00000398532 HSPG2P98160 4391 aa7.06□□□□□ -1.28
MSL1-202ENST00000398532 KMT2CQ8NEZ4 4911 aaKnown RBP7□□□□□ -1.29
MSL1-202ENST00000398532 PKD1P98161 4303 aa6.97□□□□□ -1.29
MSL1-202ENST00000398532 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
MSL1-202ENST00000398532 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
MSL1-202ENST00000398532 LPAP08519 4548 aa6.89□□□□□ -1.31
MSL1-202ENST00000398532 KRTAP10-5P60370 271 aa6.89□□□□□ -1.31
MSL1-202ENST00000398532 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
MSL1-202ENST00000398532 PCLOQ9Y6V0 5065 aa6.84□□□□□ -1.31
MSL1-202ENST00000398532 LCE2CQ5TA81 110 aa6.82□□□□□ -1.32
MSL1-202ENST00000398532 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
MSL1-202ENST00000398532 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
MSL1-202ENST00000398532 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
MSL1-202ENST00000398532 MT1XP80297 61 aa6.79□□□□□ -1.32
MSL1-202ENST00000398532 MT1BP07438 61 aa6.77□□□□□ -1.33
MSL1-202ENST00000398532 HERC1Q15751 4861 aa6.77□□□□□ -1.33
MSL1-202ENST00000398532 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
MSL1-202ENST00000398532 TNXBP22105 4242 aa6.65□□□□□ -1.35
MSL1-202ENST00000398532 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
MSL1-202ENST00000398532 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
MSL1-202ENST00000398532 MUC17Q685J3 4493 aa6.61□□□□□ -1.35
MSL1-202ENST00000398532 ABCA13Q86UQ4 5058 aa6.61□□□□□ -1.35
MSL1-202ENST00000398532 PKHD1L1Q86WI1 4243 aa6.6□□□□□ -1.35
MSL1-202ENST00000398532 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
MSL1-202ENST00000398532 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
MSL1-202ENST00000398532 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
MSL1-202ENST00000398532 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
MSL1-202ENST00000398532 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
MSL1-202ENST00000398532 FLGP20930 4061 aaPredicted RBP6.47□□□□□ -1.37
MSL1-202ENST00000398532 UBR4Q5T4S7 5183 aa6.37□□□□□ -1.39
MSL1-202ENST00000398532 LCE2BO14633 110 aa6.34□□□□□ -1.39
MSL1-202ENST00000398532 FAT4Q6V0I7 4981 aa6.27□□□□□ -1.41
MSL1-202ENST00000398532 MT1GP13640 62 aa6.27□□□□□ -1.41
MSL1-202ENST00000398532 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
MSL1-202ENST00000398532 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
MSL1-202ENST00000398532 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
MSL1-202ENST00000398532 MUC2Q02817 5179 aa6.2□□□□□ -1.42
MSL1-202ENST00000398532 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
MSL1-202ENST00000398532 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
MSL1-202ENST00000398532 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
MSL1-202ENST00000398532 SPRR2EP22531 72 aa6.09□□□□□ -1.43
MSL1-202ENST00000398532 SPRR2BP35325 72 aa6.09□□□□□ -1.43
MSL1-202ENST00000398532 SPRR2AP35326 72 aa6.09□□□□□ -1.43
MSL1-202ENST00000398532 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
MSL1-202ENST00000398532 MT1LQ93083 61 aa6.07□□□□□ -1.44
MSL1-202ENST00000398532 MT1EP04732 61 aa6.04□□□□□ -1.44
MSL1-202ENST00000398532 KRTAP19-3Q7Z4W3 81 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms