RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
TRPM1-202ENST00000397795 DNAH10Q8IVF4 4471 aa3.85□□□□□ -1.79
TRPM1-202ENST00000397795 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
TRPM1-202ENST00000397795 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
TRPM1-202ENST00000397795 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
TRPM1-202ENST00000397795 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
TRPM1-202ENST00000397795 KRTAP10-4P60372 401 aaPredicted RBP3.76□□□□□ -1.81
TRPM1-202ENST00000397795 DNAH1Q9P2D7 4330 aa3.74□□□□□ -1.81
TRPM1-202ENST00000397795 DNAH2Q9P225 4427 aa3.72□□□□□ -1.81
TRPM1-202ENST00000397795 DNAH17Q9UFH2 4485 aa3.72□□□□□ -1.81
TRPM1-202ENST00000397795 DNAH9Q9NYC9 4486 aa3.69□□□□□ -1.82
TRPM1-202ENST00000397795 DNHD1Q96M86 4753 aa3.69□□□□□ -1.82
TRPM1-202ENST00000397795 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
TRPM1-202ENST00000397795 PLECQ15149 4684 aaKnown RBP3.66□□□□□ -1.82
TRPM1-202ENST00000397795 DNAH3Q8TD57 4116 aa3.64□□□□□ -1.83
TRPM1-202ENST00000397795 VPS13DQ5THJ4 4388 aa3.62□□□□□ -1.83
TRPM1-202ENST00000397795 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
TRPM1-202ENST00000397795 LRP1BQ9NZR2 4599 aa3.6□□□□□ -1.83
TRPM1-202ENST00000397795 FRAS1Q86XX4 4008 aa3.58□□□□□ -1.84
TRPM1-202ENST00000397795 ANK2Q01484 3957 aa3.56□□□□□ -1.84
TRPM1-202ENST00000397795 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
TRPM1-202ENST00000397795 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
TRPM1-202ENST00000397795 PRKDCP78527 4128 aaKnown RBP3.54□□□□□ -1.84
TRPM1-202ENST00000397795 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
TRPM1-202ENST00000397795 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
TRPM1-202ENST00000397795 SACSQ9NZJ4 4579 aa3.51□□□□□ -1.85
TRPM1-202ENST00000397795 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
TRPM1-202ENST00000397795 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
TRPM1-202ENST00000397795 MT3P25713 68 aa3.47□□□□□ -1.85
TRPM1-202ENST00000397795 APOBP04114 4563 aaKnown RBP3.47□□□□□ -1.85
TRPM1-202ENST00000397795 HECTD4Q9Y4D8 3996 aa3.46□□□□□ -1.85
TRPM1-202ENST00000397795 LYSTQ99698 3801 aa3.46□□□□□ -1.86
TRPM1-202ENST00000397795 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
TRPM1-202ENST00000397795 FAT1Q14517 4588 aa3.45□□□□□ -1.86
TRPM1-202ENST00000397795 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
TRPM1-202ENST00000397795 DYNC2H1Q8NCM8 4307 aaKnown RBP3.42□□□□□ -1.86
TRPM1-202ENST00000397795 KMT2AQ03164 3969 aa3.41□□□□□ -1.86
TRPM1-202ENST00000397795 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.87
TRPM1-202ENST00000397795 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
TRPM1-202ENST00000397795 KRTAP17-1Q9BYP8 105 aa3.39□□□□□ -1.87
TRPM1-202ENST00000397795 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
TRPM1-202ENST00000397795 DNAH6Q9C0G6 4158 aa3.38□□□□□ -1.87
TRPM1-202ENST00000397795 KIAA1109Q2LD37 5005 aa3.37□□□□□ -1.87
TRPM1-202ENST00000397795 KRTAP4-1Q9BYQ7 146 aa3.34□□□□□ -1.87
TRPM1-202ENST00000397795 MYCBP2O75592 4640 aa3.33□□□□□ -1.88
TRPM1-202ENST00000397795 RYR1P21817 5038 aa3.33□□□□□ -1.88
TRPM1-202ENST00000397795 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
TRPM1-202ENST00000397795 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
TRPM1-202ENST00000397795 FAT3Q8TDW7 4589 aa3.3□□□□□ -1.88
TRPM1-202ENST00000397795 LRP1Q07954 4544 aaKnown RBP3.3□□□□□ -1.88
TRPM1-202ENST00000397795 RYR3Q15413 4870 aa3.29□□□□□ -1.88
TRPM1-202ENST00000397795 FAT2Q9NYQ8 4349 aa3.28□□□□□ -1.88
TRPM1-202ENST00000397795 HYDINQ4G0P3 5121 aa3.23□□□□□ -1.89
TRPM1-202ENST00000397795 RYR2Q92736 4967 aa3.22□□□□□ -1.89
TRPM1-202ENST00000397795 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
TRPM1-202ENST00000397795 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.9
TRPM1-202ENST00000397795 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
TRPM1-202ENST00000397795 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
TRPM1-202ENST00000397795 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
TRPM1-202ENST00000397795 KMT2CQ8NEZ4 4911 aaKnown RBP3.17□□□□□ -1.9
TRPM1-202ENST00000397795 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
TRPM1-202ENST00000397795 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
TRPM1-202ENST00000397795 HERC2O95714 4834 aa3.13□□□□□ -1.91
TRPM1-202ENST00000397795 LRP2P98164 4655 aa3.12□□□□□ -1.91
TRPM1-202ENST00000397795 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
TRPM1-202ENST00000397795 MT2AP02795 61 aa3.12□□□□□ -1.91
TRPM1-202ENST00000397795 HSPG2P98160 4391 aa3.11□□□□□ -1.91
TRPM1-202ENST00000397795 MT1HP80294 61 aa3.1□□□□□ -1.91
TRPM1-202ENST00000397795 MT1XP80297 61 aa3.09□□□□□ -1.91
TRPM1-202ENST00000397795 PKD1P98161 4303 aa3.09□□□□□ -1.91
TRPM1-202ENST00000397795 MT1FP04733 61 aa3.08□□□□□ -1.92
TRPM1-202ENST00000397795 PRM1P04553 51 aa3.03□□□□□ -1.92
TRPM1-202ENST00000397795 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
TRPM1-202ENST00000397795 BIRC6Q9NR09 4857 aa3.02□□□□□ -1.93
TRPM1-202ENST00000397795 MT1GP13640 62 aa3.02□□□□□ -1.93
TRPM1-202ENST00000397795 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
TRPM1-202ENST00000397795 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
TRPM1-202ENST00000397795 KRTAP2-1Q9BYU5 128 aa3.02□□□□□ -1.93
TRPM1-202ENST00000397795 MT1BP07438 61 aa2.99□□□□□ -1.93
TRPM1-202ENST00000397795 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
TRPM1-202ENST00000397795 TNXBP22105 4242 aa2.96□□□□□ -1.94
TRPM1-202ENST00000397795 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
TRPM1-202ENST00000397795 ABCA13Q86UQ4 5058 aa2.94□□□□□ -1.94
TRPM1-202ENST00000397795 HERC1Q15751 4861 aa2.93□□□□□ -1.94
TRPM1-202ENST00000397795 LPAP08519 4548 aa2.91□□□□□ -1.94
TRPM1-202ENST00000397795 SPRR2EP22531 72 aa2.9□□□□□ -1.95
TRPM1-202ENST00000397795 SPRR2BP35325 72 aa2.9□□□□□ -1.95
TRPM1-202ENST00000397795 SPRR2AP35326 72 aa2.9□□□□□ -1.95
TRPM1-202ENST00000397795 PCLOQ9Y6V0 5065 aa2.9□□□□□ -1.95
TRPM1-202ENST00000397795 FLGP20930 4061 aaPredicted RBP2.87□□□□□ -1.95
TRPM1-202ENST00000397795 KRTAP9-8Q9BYQ0 159 aa2.86□□□□□ -1.95
TRPM1-202ENST00000397795 LCE2CQ5TA81 110 aa2.85□□□□□ -1.95
TRPM1-202ENST00000397795 LCE2BO14633 110 aa2.84□□□□□ -1.95
TRPM1-202ENST00000397795 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
TRPM1-202ENST00000397795 SPRR2DP22532 72 aa2.82□□□□□ -1.96
TRPM1-202ENST00000397795 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
TRPM1-202ENST00000397795 KRTAP4-8A0A0G2JLE6 195 aa2.81□□□□□ -1.96
TRPM1-202ENST00000397795 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
TRPM1-202ENST00000397795 MT1LQ93083 61 aa2.81□□□□□ -1.96
TRPM1-202ENST00000397795 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms