RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SEC13-206ENST00000397102 CXCL6P80162 114 aa6.34□□□□□ -1.39
SEC13-206ENST00000397102 CASC2Q6XLA1 102 aa6.34□□□□□ -1.39
SEC13-206ENST00000397102 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
SEC13-206ENST00000397102 BPY2O14599 106 aa6.31□□□□□ -1.4
SEC13-206ENST00000397102 MT1XP80297 61 aa6.28□□□□□ -1.4
SEC13-206ENST00000397102 KRTAP5-3Q6L8H2 238 aa6.27□□□□□ -1.41
SEC13-206ENST00000397102 Q8N9L7 120 aa6.26□□□□□ -1.41
SEC13-206ENST00000397102 UQCR10Q9UDW1 63 aa6.26□□□□□ -1.41
SEC13-206ENST00000397102 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SEC13-206ENST00000397102 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
SEC13-206ENST00000397102 GPR98Q8WXG9 6306 aa6.21□□□□□ -1.41
SEC13-206ENST00000397102 PYY3Q5JQD4 70 aa6.21□□□□□ -1.42
SEC13-206ENST00000397102 NAA38Q9BRA0 125 aaKnown RBP6.21□□□□□ -1.42
SEC13-206ENST00000397102 A8MUN3 132 aa6.16□□□□□ -1.42
SEC13-206ENST00000397102 A0A087WVE0 104 aa6.15□□□□□ -1.42
SEC13-206ENST00000397102 H0YAA0 97 aa6.15□□□□□ -1.42
SEC13-206ENST00000397102 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
SEC13-206ENST00000397102 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
SEC13-206ENST00000397102 H3BT86 120 aa6.08□□□□□ -1.44
SEC13-206ENST00000397102 TP53AIP1Q9HCN2 124 aa6.08□□□□□ -1.44
SEC13-206ENST00000397102 M0R143 59 aa6.07□□□□□ -1.44
SEC13-206ENST00000397102 NDUFC1O43677 76 aa6.05□□□□□ -1.44
SEC13-206ENST00000397102 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
SEC13-206ENST00000397102 TSTD3H0UI37 97 aa6.04□□□□□ -1.44
SEC13-206ENST00000397102 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
SEC13-206ENST00000397102 DSTQ03001 7570 aaKnown RBP6□□□□□ -1.45
SEC13-206ENST00000397102 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
SEC13-206ENST00000397102 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
SEC13-206ENST00000397102 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
SEC13-206ENST00000397102 R4GN34 69 aa5.95□□□□□ -1.46
SEC13-206ENST00000397102 K7EP34 96 aa5.94□□□□□ -1.46
SEC13-206ENST00000397102 LOC101927531A0A1B0GV80 90 aa5.93□□□□□ -1.46
SEC13-206ENST00000397102 TRAV22A0A0B4J277 110 aa5.89□□□□□ -1.47
SEC13-206ENST00000397102 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SEC13-206ENST00000397102 M0QZ58 72 aa5.87□□□□□ -1.47
SEC13-206ENST00000397102 ACYP1P07311 99 aa5.86□□□□□ -1.47
SEC13-206ENST00000397102 A0A1W2PPM0 123 aa5.85□□□□□ -1.47
SEC13-206ENST00000397102 C9orf118A6NHY6 69 aa5.85□□□□□ -1.47
SEC13-206ENST00000397102 P0C880 135 aa5.84□□□□□ -1.47
SEC13-206ENST00000397102 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
SEC13-206ENST00000397102 BATFQ16520 125 aa5.83□□□□□ -1.48
SEC13-206ENST00000397102 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SEC13-206ENST00000397102 SPCS1Q9Y6A9 102 aa5.8□□□□□ -1.48
SEC13-206ENST00000397102 TAX1BP3O14907 124 aa5.78□□□□□ -1.48
SEC13-206ENST00000397102 ATOX1O00244 68 aa5.73□□□□□ -1.49
SEC13-206ENST00000397102 TMA7Q9Y2S6 64 aaKnown RBP5.73□□□□□ -1.49
SEC13-206ENST00000397102 H0Y9P7 68 aa5.72□□□□□ -1.49
SEC13-206ENST00000397102 UQCRQO14949 82 aa5.69□□□□□ -1.5
SEC13-206ENST00000397102 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
SEC13-206ENST00000397102 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
SEC13-206ENST00000397102 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.51
SEC13-206ENST00000397102 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
SEC13-206ENST00000397102 SMIM6P0DI80 62 aa5.61□□□□□ -1.51
SEC13-206ENST00000397102 MT4P47944 62 aa5.61□□□□□ -1.51
SEC13-206ENST00000397102 MT1EP04732 61 aa5.6□□□□□ -1.51
SEC13-206ENST00000397102 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
SEC13-206ENST00000397102 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
SEC13-206ENST00000397102 MT-ATP8P03928 68 aa5.59□□□□□ -1.51
SEC13-206ENST00000397102 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
SEC13-206ENST00000397102 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
SEC13-206ENST00000397102 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
SEC13-206ENST00000397102 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
SEC13-206ENST00000397102 MT1GP13640 62 aa5.47□□□□□ -1.53
SEC13-206ENST00000397102 MP68P56378 58 aa5.47□□□□□ -1.53
SEC13-206ENST00000397102 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
SEC13-206ENST00000397102 ETDBQ3ZM63 59 aa5.46□□□□□ -1.54
SEC13-206ENST00000397102 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
SEC13-206ENST00000397102 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
SEC13-206ENST00000397102 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
SEC13-206ENST00000397102 F8W1H4 67 aa5.41□□□□□ -1.54
SEC13-206ENST00000397102 COL5A1-AS1Q5SY13 56 aa5.39□□□□□ -1.55
SEC13-206ENST00000397102 CAMK2N1Q7Z7J9 78 aa5.39□□□□□ -1.55
SEC13-206ENST00000397102 OCR1Q9BZK8 76 aa5.38□□□□□ -1.55
SEC13-206ENST00000397102 GTF2H5Q6ZYL4 71 aa5.37□□□□□ -1.55
SEC13-206ENST00000397102 MT1MQ8N339 61 aa5.37□□□□□ -1.55
SEC13-206ENST00000397102 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
SEC13-206ENST00000397102 H3BS24 57 aa5.35□□□□□ -1.55
SEC13-206ENST00000397102 H3BPC8 53 aa5.34□□□□□ -1.55
SEC13-206ENST00000397102 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
SEC13-206ENST00000397102 FAM240AA0A1B0GVK7 77 aa5.33□□□□□ -1.56
SEC13-206ENST00000397102 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
SEC13-206ENST00000397102 A0A0D9SG42 100 aa5.28□□□□□ -1.56
SEC13-206ENST00000397102 MT1LQ93083 61 aa5.27□□□□□ -1.57
SEC13-206ENST00000397102 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
SEC13-206ENST00000397102 ACYP2P14621 99 aa5.25□□□□□ -1.57
SEC13-206ENST00000397102 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
SEC13-206ENST00000397102 LINC00643Q86TS7 51 aa5.23□□□□□ -1.57
SEC13-206ENST00000397102 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
SEC13-206ENST00000397102 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
SEC13-206ENST00000397102 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
SEC13-206ENST00000397102 LOC105371267A0A1B0GV96 52 aa5.13□□□□□ -1.59
SEC13-206ENST00000397102 SCGB1A1P11684 91 aa5.06□□□□□ -1.6
SEC13-206ENST00000397102 C10orf95Q9H7T3 257 aa5.03□□□□□ -1.6
SEC13-206ENST00000397102 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
SEC13-206ENST00000397102 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
SEC13-206ENST00000397102 KRTAP5-5Q701N2 237 aaPredicted RBP4.98□□□□□ -1.61
SEC13-206ENST00000397102 KRTAP12-4P60329 112 aa4.97□□□□□ -1.61
SEC13-206ENST00000397102 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
SEC13-206ENST00000397102 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms