RNA–Protein interactions for RNA: ENST00000396215.7

LDHC-202, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-202ENST00000396215 COX6CP09669 75 aa4.54□□□□□ -1.68
LDHC-202ENST00000396215 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
LDHC-202ENST00000396215 TRAV7A0A075B6U4 112 aa4.53□□□□□ -1.68
LDHC-202ENST00000396215 K7ERJ3 54 aa4.53□□□□□ -1.68
LDHC-202ENST00000396215 PLNP26678 52 aa4.53□□□□□ -1.68
LDHC-202ENST00000396215 RBM3P98179 157 aaKnown RBP4.52□□□□□ -1.69
LDHC-202ENST00000396215 IGHV6-1A0A0B4J1U7 121 aa4.51□□□□□ -1.69
LDHC-202ENST00000396215 CYP4F30PQ9H0H9 118 aa4.51□□□□□ -1.69
LDHC-202ENST00000396215 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
LDHC-202ENST00000396215 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
LDHC-202ENST00000396215 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
LDHC-202ENST00000396215 DSCR10P59022 87 aa4.49□□□□□ -1.69
LDHC-202ENST00000396215 LINC00313P59037 77 aa4.49□□□□□ -1.69
LDHC-202ENST00000396215 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
LDHC-202ENST00000396215 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
LDHC-202ENST00000396215 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
LDHC-202ENST00000396215 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
LDHC-202ENST00000396215 KRTAP10-5P60370 271 aa4.45□□□□□ -1.7
LDHC-202ENST00000396215 MT1BP07438 61 aa4.44□□□□□ -1.7
LDHC-202ENST00000396215 C20orf197Q8N268 126 aa4.43□□□□□ -1.7
LDHC-202ENST00000396215 LINC00575Q6W349 94 aa4.42□□□□□ -1.7
LDHC-202ENST00000396215 Q6ZQY7 126 aa4.42□□□□□ -1.7
LDHC-202ENST00000396215 SMIM11BQ8TCY0 68 aa4.41□□□□□ -1.7
LDHC-202ENST00000396215 SPINK7P58062 85 aa4.4□□□□□ -1.71
LDHC-202ENST00000396215 FAM218AQ96MZ4 157 aa4.4□□□□□ -1.71
LDHC-202ENST00000396215 SPRR2EP22531 72 aa4.39□□□□□ -1.71
LDHC-202ENST00000396215 SPRR2BP35325 72 aa4.39□□□□□ -1.71
LDHC-202ENST00000396215 SPRR2AP35326 72 aa4.39□□□□□ -1.71
LDHC-202ENST00000396215 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
LDHC-202ENST00000396215 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.38□□□□□ -1.71
LDHC-202ENST00000396215 A0A087WSZ3 146 aa4.37□□□□□ -1.71
LDHC-202ENST00000396215 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
LDHC-202ENST00000396215 Q5VV11 94 aa4.37□□□□□ -1.71
LDHC-202ENST00000396215 A0A1W2PNM2 257 aa4.36□□□□□ -1.71
LDHC-202ENST00000396215 hDV103S1A0JD37 113 aa4.36□□□□□ -1.71
LDHC-202ENST00000396215 CDC42SE1Q9NRR8 79 aa4.35□□□□□ -1.71
LDHC-202ENST00000396215 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
LDHC-202ENST00000396215 SPRR2FQ96RM1 72 aa4.34□□□□□ -1.71
LDHC-202ENST00000396215 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
LDHC-202ENST00000396215 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
LDHC-202ENST00000396215 DNAL4O96015 105 aa4.33□□□□□ -1.72
LDHC-202ENST00000396215 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
LDHC-202ENST00000396215 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
LDHC-202ENST00000396215 IGKV4-1P06312 121 aa4.32□□□□□ -1.72
LDHC-202ENST00000396215 MUSTN1Q8IVN3 82 aa4.32□□□□□ -1.72
LDHC-202ENST00000396215 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
LDHC-202ENST00000396215 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
LDHC-202ENST00000396215 SPRR2GQ9BYE4 73 aa4.31□□□□□ -1.72
LDHC-202ENST00000396215 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
LDHC-202ENST00000396215 BAALC-AS2P0C853 105 aa4.29□□□□□ -1.72
LDHC-202ENST00000396215 JMJD7-PLA2G4BH0Y9G9 81 aa4.28□□□□□ -1.72
LDHC-202ENST00000396215 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
LDHC-202ENST00000396215 NDUFB1O75438 58 aa4.27□□□□□ -1.73
LDHC-202ENST00000396215 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
LDHC-202ENST00000396215 UBL5Q9BZL1 73 aa4.27□□□□□ -1.73
LDHC-202ENST00000396215 H3BQ85 93 aa4.26□□□□□ -1.73
LDHC-202ENST00000396215 PDE6GP18545 87 aa4.26□□□□□ -1.73
LDHC-202ENST00000396215 SPRR2DP22532 72 aa4.25□□□□□ -1.73
LDHC-202ENST00000396215 H0YGX0 51 aa4.24□□□□□ -1.73
LDHC-202ENST00000396215 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
LDHC-202ENST00000396215 CASC2Q6XLA1 102 aa4.24□□□□□ -1.73
LDHC-202ENST00000396215 IGKV3D-7A0A0C4DH55 119 aa4.23□□□□□ -1.73
LDHC-202ENST00000396215 SPTSSBQ8NFR3 76 aa4.23□□□□□ -1.73
LDHC-202ENST00000396215 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
LDHC-202ENST00000396215 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
LDHC-202ENST00000396215 DEFB116Q30KQ4 102 aa4.22□□□□□ -1.73
LDHC-202ENST00000396215 A0A087WVE0 104 aa4.21□□□□□ -1.74
LDHC-202ENST00000396215 C1orf64Q8NEQ6 169 aa4.2□□□□□ -1.74
LDHC-202ENST00000396215 SPANXA2-OT1Q8N9U9 137 aa4.19□□□□□ -1.74
LDHC-202ENST00000396215 SNURFQ9Y675 71 aa4.19□□□□□ -1.74
LDHC-202ENST00000396215 NREPQ16612 68 aa4.18□□□□□ -1.74
LDHC-202ENST00000396215 A6NED7 52 aa4.17□□□□□ -1.74
LDHC-202ENST00000396215 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
LDHC-202ENST00000396215 ROMO1P60602 79 aa4.16□□□□□ -1.74
LDHC-202ENST00000396215 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
LDHC-202ENST00000396215 LOC110117498A0A087WWA1 95 aa4.14□□□□□ -1.75
LDHC-202ENST00000396215 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
LDHC-202ENST00000396215 OCR1Q9BZK8 76 aa4.14□□□□□ -1.75
LDHC-202ENST00000396215 K7ERS5 55 aa4.13□□□□□ -1.75
LDHC-202ENST00000396215 BPY2O14599 106 aa4.13□□□□□ -1.75
LDHC-202ENST00000396215 C14orf132Q9NPU4 83 aa4.13□□□□□ -1.75
LDHC-202ENST00000396215 H3BPC8 53 aa4.12□□□□□ -1.75
LDHC-202ENST00000396215 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
LDHC-202ENST00000396215 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
LDHC-202ENST00000396215 ORMDL1Q9P0S3 153 aa4.11□□□□□ -1.75
LDHC-202ENST00000396215 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
LDHC-202ENST00000396215 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
LDHC-202ENST00000396215 PRR15LQ9BU68 103 aa4.08□□□□□ -1.76
LDHC-202ENST00000396215 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
LDHC-202ENST00000396215 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
LDHC-202ENST00000396215 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
LDHC-202ENST00000396215 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
LDHC-202ENST00000396215 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
LDHC-202ENST00000396215 MT1XP80297 61 aa4.04□□□□□ -1.76
LDHC-202ENST00000396215 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
LDHC-202ENST00000396215 Q6ZQT0 140 aa4.03□□□□□ -1.76
LDHC-202ENST00000396215 A8MU10 97 aa4.02□□□□□ -1.77
LDHC-202ENST00000396215 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
LDHC-202ENST00000396215 LUZP6Q538Z0 58 aa4□□□□□ -1.77
LDHC-202ENST00000396215 S4R3F8 94 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms