RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 HUWE1Q7Z6Z7 4374 aaKnown RBP7.23□□□□□ -1.25
SREBF1-203ENST00000395751 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
SREBF1-203ENST00000395751 DNAH11Q96DT5 4516 aa6.99□□□□□ -1.29
SREBF1-203ENST00000395751 DNAH10Q8IVF4 4471 aa6.96□□□□□ -1.3
SREBF1-203ENST00000395751 ZNF469Q96JG9 3925 aaPredicted RBP6.95□□□□□ -1.3
SREBF1-203ENST00000395751 DNAH1Q9P2D7 4330 aa6.9□□□□□ -1.3
SREBF1-203ENST00000395751 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
SREBF1-203ENST00000395751 DNAH8Q96JB1 4490 aa6.85□□□□□ -1.31
SREBF1-203ENST00000395751 DNAH5Q8TE73 4624 aa6.85□□□□□ -1.31
SREBF1-203ENST00000395751 FAT1Q14517 4588 aa6.8□□□□□ -1.32
SREBF1-203ENST00000395751 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
SREBF1-203ENST00000395751 DNAH17Q9UFH2 4485 aa6.79□□□□□ -1.32
SREBF1-203ENST00000395751 DNAH9Q9NYC9 4486 aa6.77□□□□□ -1.32
SREBF1-203ENST00000395751 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
SREBF1-203ENST00000395751 SPRR5A0A1B0GTR4 108 aa6.71□□□□□ -1.33
SREBF1-203ENST00000395751 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
SREBF1-203ENST00000395751 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
SREBF1-203ENST00000395751 VPS13DQ5THJ4 4388 aa6.65□□□□□ -1.34
SREBF1-203ENST00000395751 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
SREBF1-203ENST00000395751 KRTAP4-1Q9BYQ7 146 aa6.61□□□□□ -1.35
SREBF1-203ENST00000395751 SPRR2GQ9BYE4 73 aa6.61□□□□□ -1.35
SREBF1-203ENST00000395751 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
SREBF1-203ENST00000395751 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
SREBF1-203ENST00000395751 APOBP04114 4563 aaKnown RBP6.48□□□□□ -1.37
SREBF1-203ENST00000395751 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
SREBF1-203ENST00000395751 DNAH3Q8TD57 4116 aa6.45□□□□□ -1.38
SREBF1-203ENST00000395751 ANK2Q01484 3957 aa6.44□□□□□ -1.38
SREBF1-203ENST00000395751 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
SREBF1-203ENST00000395751 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
SREBF1-203ENST00000395751 STARD9Q9P2P6 4700 aa6.37□□□□□ -1.39
SREBF1-203ENST00000395751 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.4
SREBF1-203ENST00000395751 KRTAP19-5Q3LI72 72 aa6.34□□□□□ -1.4
SREBF1-203ENST00000395751 MT2AP02795 61 aa6.32□□□□□ -1.4
SREBF1-203ENST00000395751 VPS13BQ7Z7G8 4022 aa6.31□□□□□ -1.4
SREBF1-203ENST00000395751 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
SREBF1-203ENST00000395751 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
SREBF1-203ENST00000395751 MT1FP04733 61 aa6.21□□□□□ -1.41
SREBF1-203ENST00000395751 MT1HP80294 61 aa6.21□□□□□ -1.41
SREBF1-203ENST00000395751 DNHD1Q96M86 4753 aa6.21□□□□□ -1.42
SREBF1-203ENST00000395751 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
SREBF1-203ENST00000395751 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
SREBF1-203ENST00000395751 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
SREBF1-203ENST00000395751 RYR1P21817 5038 aa6.15□□□□□ -1.42
SREBF1-203ENST00000395751 LYSTQ99698 3801 aa6.11□□□□□ -1.43
SREBF1-203ENST00000395751 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
SREBF1-203ENST00000395751 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
SREBF1-203ENST00000395751 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
SREBF1-203ENST00000395751 HECTD4Q9Y4D8 3996 aa6.05□□□□□ -1.44
SREBF1-203ENST00000395751 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
SREBF1-203ENST00000395751 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
SREBF1-203ENST00000395751 MT1XP80297 61 aa6.01□□□□□ -1.45
SREBF1-203ENST00000395751 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
SREBF1-203ENST00000395751 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
SREBF1-203ENST00000395751 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
SREBF1-203ENST00000395751 LRP2P98164 4655 aa5.89□□□□□ -1.47
SREBF1-203ENST00000395751 DNAH7Q8WXX0 4024 aa5.89□□□□□ -1.47
SREBF1-203ENST00000395751 MT1BP07438 61 aa5.86□□□□□ -1.47
SREBF1-203ENST00000395751 KIAA1109Q2LD37 5005 aa5.83□□□□□ -1.48
SREBF1-203ENST00000395751 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
SREBF1-203ENST00000395751 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
SREBF1-203ENST00000395751 RYR2Q92736 4967 aa5.72□□□□□ -1.49
SREBF1-203ENST00000395751 RYR3Q15413 4870 aa5.71□□□□□ -1.5
SREBF1-203ENST00000395751 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
SREBF1-203ENST00000395751 MT1GP13640 62 aa5.66□□□□□ -1.5
SREBF1-203ENST00000395751 KRTAP4-8A0A0G2JLE6 195 aa5.64□□□□□ -1.51
SREBF1-203ENST00000395751 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
SREBF1-203ENST00000395751 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
SREBF1-203ENST00000395751 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.51
SREBF1-203ENST00000395751 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
SREBF1-203ENST00000395751 LCE3EQ5T5B0 92 aa5.59□□□□□ -1.51
SREBF1-203ENST00000395751 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
SREBF1-203ENST00000395751 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
SREBF1-203ENST00000395751 HSPG2P98160 4391 aa5.55□□□□□ -1.52
SREBF1-203ENST00000395751 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SREBF1-203ENST00000395751 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
SREBF1-203ENST00000395751 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
SREBF1-203ENST00000395751 PKD1P98161 4303 aa5.52□□□□□ -1.53
SREBF1-203ENST00000395751 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
SREBF1-203ENST00000395751 KMT2CQ8NEZ4 4911 aaKnown RBP5.48□□□□□ -1.53
SREBF1-203ENST00000395751 PKHD1P08F94 4074 aa5.47□□□□□ -1.53
SREBF1-203ENST00000395751 MT1LQ93083 61 aa5.46□□□□□ -1.53
SREBF1-203ENST00000395751 HERC2O95714 4834 aa5.43□□□□□ -1.54
SREBF1-203ENST00000395751 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
SREBF1-203ENST00000395751 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
SREBF1-203ENST00000395751 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
SREBF1-203ENST00000395751 PKHD1L1Q86WI1 4243 aa5.41□□□□□ -1.54
SREBF1-203ENST00000395751 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.54
SREBF1-203ENST00000395751 HERC1Q15751 4861 aa5.38□□□□□ -1.55
SREBF1-203ENST00000395751 LPAP08519 4548 aa5.38□□□□□ -1.55
SREBF1-203ENST00000395751 PRM1P04553 51 aa5.35□□□□□ -1.55
SREBF1-203ENST00000395751 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
SREBF1-203ENST00000395751 MT1EP04732 61 aa5.33□□□□□ -1.56
SREBF1-203ENST00000395751 TNXBP22105 4242 aa5.26□□□□□ -1.57
SREBF1-203ENST00000395751 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
SREBF1-203ENST00000395751 PCLOQ9Y6V0 5065 aa5.22□□□□□ -1.57
SREBF1-203ENST00000395751 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
SREBF1-203ENST00000395751 LCE2BO14633 110 aa5.14□□□□□ -1.59
SREBF1-203ENST00000395751 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
SREBF1-203ENST00000395751 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
SREBF1-203ENST00000395751 MT1MQ8N339 61 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms