RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 TACC2O95359 2948 aa-0.29□□□□□ -2.46
SNORA48.1-201ENST00000390879 SYCP2Q9BX26 1530 aa-0.29□□□□□ -2.46
SNORA48.1-201ENST00000390879 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 USP9YO00507 2555 aaPredicted RBP-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 KIF21BO75037 1637 aa-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 DEFB131AP59861 70 aa-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 FANCD2Q9BXW9 1451 aa-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 RYR2Q92736 4967 aa-0.3□□□□□ -2.46
SNORA48.1-201ENST00000390879 ADCY10Q96PN6 1610 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 KIAA1109Q2LD37 5005 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 ZZEF1O43149 2961 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 SNRPGP15A8MWD9 76 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 MT1HP80294 61 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 KALRNO60229 2985 aa-0.31□□□□□ -2.46
SNORA48.1-201ENST00000390879 LMO7Q8WWI1 1683 aa-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 POLR2KP53803 58 aaKnown RBP-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 RANBP2P49792 3224 aaKnown RBP-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 NEBP20929 6669 aa-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 MGAM2Q2M2H8 2515 aa-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 ABCC8Q09428 1581 aa-0.32□□□□□ -2.46
SNORA48.1-201ENST00000390879 DNAH1Q9P2D7 4330 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 DNAH8Q96JB1 4490 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 RNF213Q63HN8 5207 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 PREX2Q70Z35 1606 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 LINC01546A6NGU7 62 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 ACACBO00763 2458 aa-0.33□□□□□ -2.46
SNORA48.1-201ENST00000390879 WDR87Q6ZQQ6 2873 aa-0.34□□□□□ -2.46
SNORA48.1-201ENST00000390879 LRRK2Q5S007 2527 aa-0.34□□□□□ -2.46
SNORA48.1-201ENST00000390879 DNHD1Q96M86 4753 aa-0.34□□□□□ -2.46
SNORA48.1-201ENST00000390879 CCDC168Q8NDH2 2452 aa-0.34□□□□□ -2.46
SNORA48.1-201ENST00000390879 NBEAQ8NFP9 2946 aa-0.35□□□□□ -2.47
SNORA48.1-201ENST00000390879 MROH2AA6NES4 1674 aa-0.35□□□□□ -2.47
SNORA48.1-201ENST00000390879 FAM208AQ9UK61 1670 aaKnown RBP-0.35□□□□□ -2.47
SNORA48.1-201ENST00000390879 A0A1B0GUL6 1792 aa-0.36□□□□□ -2.47
SNORA48.1-201ENST00000390879 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.36□□□□□ -2.47
SNORA48.1-201ENST00000390879 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
SNORA48.1-201ENST00000390879 ABCA5Q8WWZ7 1642 aa-0.36□□□□□ -2.47
SNORA48.1-201ENST00000390879 LAMA2P24043 3122 aaKnown RBP-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 DNAH7Q8WXX0 4024 aa-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 NBEAL2Q6ZNJ1 2754 aa-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 DYNC1H1Q14204 4646 aaKnown RBP-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 NDUFA1O15239 70 aa-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
SNORA48.1-201ENST00000390879 NFAT5O94916 1531 aa-0.38□□□□□ -2.47
SNORA48.1-201ENST00000390879 TEX15Q9BXT5 2789 aa-0.38□□□□□ -2.47
SNORA48.1-201ENST00000390879 LAMA3Q16787 3333 aa-0.38□□□□□ -2.47
SNORA48.1-201ENST00000390879 NRXN3Q9Y4C0 1643 aa-0.38□□□□□ -2.47
SNORA48.1-201ENST00000390879 TLN2Q9Y4G6 2542 aa-0.39□□□□□ -2.47
SNORA48.1-201ENST00000390879 USP9XQ93008 2570 aaPredicted RBP-0.4□□□□□ -2.47
SNORA48.1-201ENST00000390879 TRPM2O94759 1503 aa-0.4□□□□□ -2.47
SNORA48.1-201ENST00000390879 NIPBLQ6KC79 2804 aaeCLIP-0.4□□□□□ -2.47
SNORA48.1-201ENST00000390879 A0A0C4DFX4 3053 aa-0.41□□□□□ -2.47
SNORA48.1-201ENST00000390879 MT1EP04732 61 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 MT1XP80297 61 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 TOMM5Q8N4H5 51 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 RELNP78509 3460 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 IQGAP1P46940 1657 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 DNAH17Q9UFH2 4485 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 DNAH5Q8TE73 4624 aa-0.41□□□□□ -2.48
SNORA48.1-201ENST00000390879 SPENQ96T58 3664 aaKnown RBP-0.42□□□□□ -2.48
SNORA48.1-201ENST00000390879 MYO9AB2RTY4 2548 aa-0.43□□□□□ -2.48
SNORA48.1-201ENST00000390879 FRYQ5TBA9 3013 aa-0.43□□□□□ -2.48
SNORA48.1-201ENST00000390879 SPTAN1Q13813 2472 aaKnown RBP-0.43□□□□□ -2.48
SNORA48.1-201ENST00000390879 SPTBN5Q9NRC6 3674 aaKnown RBP-0.43□□□□□ -2.48
SNORA48.1-201ENST00000390879 CELSR3Q9NYQ7 3312 aa-0.44□□□□□ -2.48
SNORA48.1-201ENST00000390879 LEAP2Q969E1 77 aa-0.44□□□□□ -2.48
SNORA48.1-201ENST00000390879 C5orf42Q9H799 3197 aa-0.44□□□□□ -2.48
SNORA48.1-201ENST00000390879 MT1LQ93083 61 aa-0.45□□□□□ -2.48
SNORA48.1-201ENST00000390879 COL12A1Q99715 3063 aa-0.45□□□□□ -2.48
SNORA48.1-201ENST00000390879 LRBAP50851 2863 aa-0.46□□□□□ -2.48
SNORA48.1-201ENST00000390879 COL6A5A8TX70 2615 aa-0.46□□□□□ -2.48
SNORA48.1-201ENST00000390879 CEP295Q9C0D2 2601 aa-0.46□□□□□ -2.48
SNORA48.1-201ENST00000390879 DNAH10Q8IVF4 4471 aa-0.46□□□□□ -2.48
SNORA48.1-201ENST00000390879 DDX60Q8IY21 1712 aaKnown RBP-0.47□□□□□ -2.48
SNORA48.1-201ENST00000390879 SRCAPQ6ZRS2 3230 aa-0.47□□□□□ -2.48
SNORA48.1-201ENST00000390879 TRRAPQ9Y4A5 3859 aa-0.47□□□□□ -2.48
SNORA48.1-201ENST00000390879 CHD7Q9P2D1 2997 aa-0.47□□□□□ -2.48
SNORA48.1-201ENST00000390879 ABCA13Q86UQ4 5058 aa-0.48□□□□□ -2.49
SNORA48.1-201ENST00000390879 CLTCL1P53675 1640 aa-0.49□□□□□ -2.49
SNORA48.1-201ENST00000390879 ITPR1Q14643 2758 aa-0.49□□□□□ -2.49
SNORA48.1-201ENST00000390879 TOMM7Q9P0U1 55 aa-0.49□□□□□ -2.49
SNORA48.1-201ENST00000390879 CFAP46Q8IYW2 2715 aa-0.5□□□□□ -2.49
SNORA48.1-201ENST00000390879 DEFB4AO15263 64 aa-0.5□□□□□ -2.49
SNORA48.1-201ENST00000390879 MT1GP13640 62 aa-0.5□□□□□ -2.49
SNORA48.1-201ENST00000390879 MT1HL1P0DM35 61 aa-0.51□□□□□ -2.49
SNORA48.1-201ENST00000390879 DEFB136Q30KP8 78 aa-0.51□□□□□ -2.49
SNORA48.1-201ENST00000390879 CSMD1Q96PZ7 3565 aa-0.51□□□□□ -2.49
SNORA48.1-201ENST00000390879 EYSQ5T1H1 3165 aa-0.51□□□□□ -2.49
SNORA48.1-201ENST00000390879 ADGRG4Q8IZF6 3080 aa-0.52□□□□□ -2.49
SNORA48.1-201ENST00000390879 TLN1Q9Y490 2541 aaKnown RBP-0.53□□□□□ -2.49
SNORA48.1-201ENST00000390879 IQGAP2Q13576 1575 aa-0.53□□□□□ -2.49
SNORA48.1-201ENST00000390879 RPL39P62891 51 aaKnown RBP-0.53□□□□□ -2.49
SNORA48.1-201ENST00000390879 MGAQ8IWI9 3026 aa-0.53□□□□□ -2.49
SNORA48.1-201ENST00000390879 ITPR2Q14571 2701 aa-0.54□□□□□ -2.5
SNORA48.1-201ENST00000390879 DMXL2Q8TDJ6 3036 aa-0.54□□□□□ -2.5
SNORA48.1-201ENST00000390879 MT1MQ8N339 61 aa-0.56□□□□□ -2.5
SNORA48.1-201ENST00000390879 SMG1Q96Q15 3661 aaKnown RBP-0.56□□□□□ -2.5
SNORA48.1-201ENST00000390879 MT2AP02795 61 aa-0.57□□□□□ -2.5
SNORA48.1-201ENST00000390879 CSMD2Q7Z408 3487 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms