RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 KRTAP4-9Q9BYQ8 210 aa0.96□□□□□ -2.26
TRAJ17-201ENST00000390520 HSPG2P98160 4391 aa0.96□□□□□ -2.26
TRAJ17-201ENST00000390520 HUWE1Q7Z6Z7 4374 aaKnown RBP0.96□□□□□ -2.26
TRAJ17-201ENST00000390520 LAMA3Q16787 3333 aa0.96□□□□□ -2.26
TRAJ17-201ENST00000390520 NOTCH1P46531 2555 aa0.95□□□□□ -2.26
TRAJ17-201ENST00000390520 DEFB108BQ8NET1 73 aa0.95□□□□□ -2.26
TRAJ17-201ENST00000390520 HRNRQ86YZ3 2850 aaPredicted RBP0.95□□□□□ -2.26
TRAJ17-201ENST00000390520 ACACBO00763 2458 aa0.95□□□□□ -2.26
TRAJ17-201ENST00000390520 DNAH6Q9C0G6 4158 aa0.95□□□□□ -2.26
TRAJ17-201ENST00000390520 XIRP2A4UGR9 3374 aa0.94□□□□□ -2.26
TRAJ17-201ENST00000390520 TEP1Q99973 2627 aaKnown RBP0.94□□□□□ -2.26
TRAJ17-201ENST00000390520 WDFY4Q6ZS81 3184 aa0.94□□□□□ -2.26
TRAJ17-201ENST00000390520 DNAH10Q8IVF4 4471 aa0.93□□□□□ -2.26
TRAJ17-201ENST00000390520 UTRNP46939 3433 aa0.93□□□□□ -2.26
TRAJ17-201ENST00000390520 DNAH1Q9P2D7 4330 aa0.93□□□□□ -2.26
TRAJ17-201ENST00000390520 KRTAP4-8A0A0G2JLE6 195 aa0.93□□□□□ -2.26
TRAJ17-201ENST00000390520 TGP01266 2768 aa0.93□□□□□ -2.26
TRAJ17-201ENST00000390520 CMYA5Q8N3K9 4069 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 DOPEY1Q5JWR5 2465 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 TRRAPQ9Y4A5 3859 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 H3BNG1 76 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 DEFB110Q30KQ9 67 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 KRTAP8-1Q8IUC2 63 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 GOLGB1Q14789 3259 aaKnown RBP0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 FAT3Q8TDW7 4589 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 ADGRG4Q8IZF6 3080 aa0.92□□□□□ -2.26
TRAJ17-201ENST00000390520 FASNP49327 2511 aaKnown RBP0.91□□□□□ -2.26
TRAJ17-201ENST00000390520 PRM1P04553 51 aa0.91□□□□□ -2.26
TRAJ17-201ENST00000390520 MAST4O15021 2626 aa0.91□□□□□ -2.26
TRAJ17-201ENST00000390520 DNAH9Q9NYC9 4486 aa0.91□□□□□ -2.26
TRAJ17-201ENST00000390520 NBEAL1Q6ZS30 2694 aa0.91□□□□□ -2.26
TRAJ17-201ENST00000390520 FLNAP21333 2647 aaKnown RBP0.9□□□□□ -2.26
TRAJ17-201ENST00000390520 SPEGQ15772 3267 aa0.9□□□□□ -2.26
TRAJ17-201ENST00000390520 KRTAP4-5Q9BYR2 181 aa0.9□□□□□ -2.27
TRAJ17-201ENST00000390520 SVEP1Q4LDE5 3571 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 LCE1CQ5T751 118 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 LCE1BQ5T7P3 118 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 PKHD1P08F94 4074 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 USP34Q70CQ2 3546 aa0.89□□□□□ -2.27
TRAJ17-201ENST00000390520 CEP295Q9C0D2 2601 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 Q9Y3F1 56 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 U3KQA8 63 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 CENPEQ02224 2701 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 MGAM2Q2M2H8 2515 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 LOC400499M0QZD8 3231 aa0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 LAMA2P24043 3122 aaKnown RBP0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 SPTAN1Q13813 2472 aaKnown RBP0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 APOBP04114 4563 aaKnown RBP0.88□□□□□ -2.27
TRAJ17-201ENST00000390520 LAMA1P25391 3075 aa0.87□□□□□ -2.27
TRAJ17-201ENST00000390520 LINC01556Q5JQF7 62 aa0.87□□□□□ -2.27
TRAJ17-201ENST00000390520 KRTAP4-7Q9BYR0 210 aa0.87□□□□□ -2.27
TRAJ17-201ENST00000390520 LRP1Q07954 4544 aaKnown RBP0.87□□□□□ -2.27
TRAJ17-201ENST00000390520 CSMD2Q7Z408 3487 aa0.87□□□□□ -2.27
TRAJ17-201ENST00000390520 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
TRAJ17-201ENST00000390520 PLECQ15149 4684 aaKnown RBP0.86□□□□□ -2.27
TRAJ17-201ENST00000390520 DNAH17Q9UFH2 4485 aa0.85□□□□□ -2.27
TRAJ17-201ENST00000390520 VPS13CQ709C8 3753 aa0.85□□□□□ -2.27
TRAJ17-201ENST00000390520 A0A096LPF7 62 aa0.85□□□□□ -2.27
TRAJ17-201ENST00000390520 ASPMQ8IZT6 3477 aa0.84□□□□□ -2.27
TRAJ17-201ENST00000390520 RPS29P62273 56 aaKnown RBP0.84□□□□□ -2.27
TRAJ17-201ENST00000390520 EP400Q96L91 3159 aa0.83□□□□□ -2.28
TRAJ17-201ENST00000390520 KRTAP5-5Q701N2 237 aaPredicted RBP0.83□□□□□ -2.28
TRAJ17-201ENST00000390520 KRTAP4-2Q9BYR5 136 aa0.83□□□□□ -2.28
TRAJ17-201ENST00000390520 LPAP08519 4548 aa0.83□□□□□ -2.28
TRAJ17-201ENST00000390520 IGSF10Q6WRI0 2623 aa0.82□□□□□ -2.28
TRAJ17-201ENST00000390520 TLN1Q9Y490 2541 aaKnown RBP0.82□□□□□ -2.28
TRAJ17-201ENST00000390520 DNAH5Q8TE73 4624 aa0.82□□□□□ -2.28
TRAJ17-201ENST00000390520 DEFB133Q30KQ1 61 aa0.81□□□□□ -2.28
TRAJ17-201ENST00000390520 LCE3AQ5TA76 89 aa0.81□□□□□ -2.28
TRAJ17-201ENST00000390520 MYO15AQ9UKN7 3530 aa0.81□□□□□ -2.28
TRAJ17-201ENST00000390520 SMR3BP02814 79 aaPredicted RBP0.8□□□□□ -2.28
TRAJ17-201ENST00000390520 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
TRAJ17-201ENST00000390520 STAB2Q8WWQ8 2551 aa0.79□□□□□ -2.28
TRAJ17-201ENST00000390520 DYNC1H1Q14204 4646 aaKnown RBP0.78□□□□□ -2.28
TRAJ17-201ENST00000390520 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
TRAJ17-201ENST00000390520 PCNTO95613 3336 aa0.77□□□□□ -2.29
TRAJ17-201ENST00000390520 MT1AP04731 61 aa0.77□□□□□ -2.29
TRAJ17-201ENST00000390520 KRTAP5-3Q6L8H2 238 aa0.77□□□□□ -2.29
TRAJ17-201ENST00000390520 FAT1Q14517 4588 aa0.77□□□□□ -2.29
TRAJ17-201ENST00000390520 SPRR2DP22532 72 aa0.76□□□□□ -2.29
TRAJ17-201ENST00000390520 CENPFP49454 3210 aa0.76□□□□□ -2.29
TRAJ17-201ENST00000390520 MUC17Q685J3 4493 aa0.76□□□□□ -2.29
TRAJ17-201ENST00000390520 BRCA2P51587 3418 aa0.75□□□□□ -2.29
TRAJ17-201ENST00000390520 EYSQ5T1H1 3165 aa0.75□□□□□ -2.29
TRAJ17-201ENST00000390520 VCANP13611 3396 aa0.74□□□□□ -2.29
TRAJ17-201ENST00000390520 UNC80Q8N2C7 3258 aa0.74□□□□□ -2.29
TRAJ17-201ENST00000390520 SPRR2BP35325 72 aa0.74□□□□□ -2.29
TRAJ17-201ENST00000390520 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
TRAJ17-201ENST00000390520 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
TRAJ17-201ENST00000390520 WDFY3Q8IZQ1 3526 aa0.73□□□□□ -2.29
TRAJ17-201ENST00000390520 LRP1BQ9NZR2 4599 aa0.72□□□□□ -2.29
TRAJ17-201ENST00000390520 MUC19Q7Z5P9 8384 aa0.72□□□□□ -2.29
TRAJ17-201ENST00000390520 SPRR2AP35326 72 aa0.71□□□□□ -2.3
TRAJ17-201ENST00000390520 KRTAP6-2Q3LI66 62 aa0.71□□□□□ -2.3
TRAJ17-201ENST00000390520 DNAH14Q0VDD8 3507 aa0.69□□□□□ -2.3
TRAJ17-201ENST00000390520 CD52P31358 61 aa0.69□□□□□ -2.3
TRAJ17-201ENST00000390520 KRTAP5-1Q6L8H4 278 aa0.69□□□□□ -2.3
TRAJ17-201ENST00000390520 MYO9AB2RTY4 2548 aa0.68□□□□□ -2.3
TRAJ17-201ENST00000390520 KRTAP5-11Q6L8G4 156 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms