RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 SMIM2Q9BVW6 85 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 TTTY10Q9BZA0 68 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 UBL5Q9BZL1 73 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 CHMP4BQ9H444 224 aaKnown RBP-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 ST20Q9HBF5 79 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 CALML5Q9NZT1 146 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 HSPB11Q9Y547 144 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 AP4S1Q9Y587 144 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 V9GYQ6 96 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 GOLGA4Q13439 2230 aaKnown RBP-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 TAF1LQ8IZX4 1826 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 PATJQ8NI35 1801 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 ARFGEF1Q9Y6D6 1849 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 ARHGAP21Q5T5U3 1957 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK4Q8N1I0 1966 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 RB1CC1Q8TDY2 1594 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 MYO7BQ6PIF6 2116 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 ZGRF1Q86YA3 2104 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 NALCNQ8IZF0 1738 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 BRCA1P38398 1863 aaKnown RBP-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 RALGAPA2Q2PPJ7 1873 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 NYNRINQ9P2P1 1898 aaKnown RBP-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 CHD3Q12873 2000 aaKnown RBP-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK3Q8IZD9 2030 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK6Q96HP0 2047 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 SCN2AQ99250 2005 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 CCDC18Q5T9S5 1454 aa-0.16□□□□□ -2.44
TRAJ54-201ENST00000390484 A0A1B0GUL6 1792 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RGPD3A6NKT7 1758 aaPredicted RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 AKAP12Q02952 1782 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RGPD4Q7Z3J3 1758 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 VWA8A3KMH1 1905 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 AK9Q5TCS8 1911 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 MPDZO75970 2070 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK9Q9BZ29 2069 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PIKFYVEQ9Y2I7 2098 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 EFCAB5A4FU69 1503 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 BTAF1O14981 1849 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PARP14Q460N5 1801 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK2Q92608 1830 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 OTOFQ9HC10 1997 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SMIM27A0A1W2PRY6 76 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 EFCAB10A6NFE3 127 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 H0YGX0 51 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 H3BVH4 76 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 K7EIM0 57 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 M0R143 59 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SNAPC5O75971 98 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 S100A8P05109 93 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PTMAP06454 111 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 HTN1P15515 57 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 TAF1P21675 1872 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 S100A1P23297 94 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 S100PP25815 95 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 S100A10P60903 97 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PKIAP61925 76 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RPL39P62891 51 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RPL38P63173 70 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 IQGAP2Q13576 1575 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PCM1Q15154 2024 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ATXN8Q156A1 80 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 FER1L6Q2WGJ9 1857 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 COL5A1-AS1Q5SY13 56 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 LINC01590Q5TEZ4 76 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RALGAPA1Q6GYQ0 2036 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 GTF2H5Q6ZYL4 71 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 CROCCP2Q86T23 111 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DDX60Q8IY21 1712 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SVBPQ8N300 66 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DEFB104AQ8WTQ1 72 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RPL39LQ96EH5 51 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 TSC22D3Q99576 134 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ABCA3Q99758 1704 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 RHPN1-AS1Q9BWJ2 59 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 TRPM6Q9BX84 2022 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DPY30Q9C005 99 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 FAM107BQ9H098 131 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 MYO5CQ9NQX4 1742 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 TMEM167BQ9NRX6 74 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SCN3AQ9NY46 2000 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ABRACLQ9P1F3 81 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 GNG8Q9UK08 70 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ANKRD26Q9UPS8 1709 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 DOCK8Q8NF50 2099 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PTPRFP10586 1907 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PTPRSQ13332 1948 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 MYLKQ15746 1914 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ANAPC1Q9H1A4 1944 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 ANKRD36CQ5JPF3 1778 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SNRNP200O75643 2136 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 MED12LQ86YW9 2145 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PTPRBP23467 1997 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 MYH14Q7Z406 1995 aaKnown RBP-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SCN10AQ9Y5Y9 1956 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 PSME4Q14997 1843 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 FOCADQ5VW36 1801 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 SPEF2Q9C093 1822 aa-0.17□□□□□ -2.44
TRAJ54-201ENST00000390484 CLTCQ00610 1675 aaKnown RBP-0.18□□□□□ -2.44
TRAJ54-201ENST00000390484 FANCMQ8IYD8 2048 aa-0.18□□□□□ -2.44
TRAJ54-201ENST00000390484 NUP205Q92621 2012 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms