RNA–Protein interactions for RNA: ENST00000389721.9

SPTB-203, Transcript of spectrin beta, erythrocytic, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTB, Length 6,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-203ENST00000389721 DNAH9Q9NYC9 4486 aa5.3□□□□□ -1.56
SPTB-203ENST00000389721 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
SPTB-203ENST00000389721 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
SPTB-203ENST00000389721 SRRM2Q9UQ35 2752 aaKnown RBP5.28□□□□□ -1.56
SPTB-203ENST00000389721 COL7A1Q02388 2944 aa5.28□□□□□ -1.56
SPTB-203ENST00000389721 ZNF469Q96JG9 3925 aaPredicted RBP5.26□□□□□ -1.57
SPTB-203ENST00000389721 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
SPTB-203ENST00000389721 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
SPTB-203ENST00000389721 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
SPTB-203ENST00000389721 MT1HP80294 61 aa5.14□□□□□ -1.59
SPTB-203ENST00000389721 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
SPTB-203ENST00000389721 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
SPTB-203ENST00000389721 DNAH10Q8IVF4 4471 aa5.08□□□□□ -1.6
SPTB-203ENST00000389721 DNAH3Q8TD57 4116 aa5.06□□□□□ -1.6
SPTB-203ENST00000389721 PLECQ15149 4684 aaKnown RBP5.03□□□□□ -1.6
SPTB-203ENST00000389721 MT2AP02795 61 aa5.01□□□□□ -1.61
SPTB-203ENST00000389721 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
SPTB-203ENST00000389721 DNAH17Q9UFH2 4485 aa4.98□□□□□ -1.61
SPTB-203ENST00000389721 DNAH11Q96DT5 4516 aa4.98□□□□□ -1.61
SPTB-203ENST00000389721 VPS13DQ5THJ4 4388 aa4.95□□□□□ -1.62
SPTB-203ENST00000389721 FAT2Q9NYQ8 4349 aa4.94□□□□□ -1.62
SPTB-203ENST00000389721 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SPTB-203ENST00000389721 CMYA5Q8N3K9 4069 aa4.93□□□□□ -1.62
SPTB-203ENST00000389721 MT1FP04733 61 aa4.93□□□□□ -1.62
SPTB-203ENST00000389721 ANK2Q01484 3957 aa4.91□□□□□ -1.62
SPTB-203ENST00000389721 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
SPTB-203ENST00000389721 DNAH8Q96JB1 4490 aa4.89□□□□□ -1.63
SPTB-203ENST00000389721 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
SPTB-203ENST00000389721 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
SPTB-203ENST00000389721 DYNC2H1Q8NCM8 4307 aaKnown RBP4.86□□□□□ -1.63
SPTB-203ENST00000389721 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
SPTB-203ENST00000389721 STARD9Q9P2P6 4700 aa4.85□□□□□ -1.63
SPTB-203ENST00000389721 DYNC1H1Q14204 4646 aaKnown RBP4.82□□□□□ -1.64
SPTB-203ENST00000389721 LYSTQ99698 3801 aa4.81□□□□□ -1.64
SPTB-203ENST00000389721 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
SPTB-203ENST00000389721 DNAH7Q8WXX0 4024 aa4.79□□□□□ -1.64
SPTB-203ENST00000389721 PRKDCP78527 4128 aaKnown RBP4.79□□□□□ -1.64
SPTB-203ENST00000389721 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SPTB-203ENST00000389721 KMT2AQ03164 3969 aa4.77□□□□□ -1.65
SPTB-203ENST00000389721 VPS13BQ7Z7G8 4022 aa4.75□□□□□ -1.65
SPTB-203ENST00000389721 SPRR2EP22531 72 aa4.73□□□□□ -1.65
SPTB-203ENST00000389721 SPRR2BP35325 72 aa4.73□□□□□ -1.65
SPTB-203ENST00000389721 SPRR2AP35326 72 aa4.73□□□□□ -1.65
SPTB-203ENST00000389721 FAT1Q14517 4588 aa4.73□□□□□ -1.65
SPTB-203ENST00000389721 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
SPTB-203ENST00000389721 DNHD1Q96M86 4753 aa4.63□□□□□ -1.67
SPTB-203ENST00000389721 APOBP04114 4563 aaKnown RBP4.63□□□□□ -1.67
SPTB-203ENST00000389721 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
SPTB-203ENST00000389721 RYR1P21817 5038 aa4.6□□□□□ -1.67
SPTB-203ENST00000389721 SPRR2DP22532 72 aa4.57□□□□□ -1.68
SPTB-203ENST00000389721 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
SPTB-203ENST00000389721 MT1GP13640 62 aa4.55□□□□□ -1.68
SPTB-203ENST00000389721 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
SPTB-203ENST00000389721 HECTD4Q9Y4D8 3996 aa4.48□□□□□ -1.69
SPTB-203ENST00000389721 MT1XP80297 61 aa4.48□□□□□ -1.69
SPTB-203ENST00000389721 LCE2BO14633 110 aa4.48□□□□□ -1.69
SPTB-203ENST00000389721 RYR3Q15413 4870 aa4.48□□□□□ -1.69
SPTB-203ENST00000389721 KRTAP19-1Q8IUB9 90 aa4.47□□□□□ -1.69
SPTB-203ENST00000389721 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
SPTB-203ENST00000389721 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
SPTB-203ENST00000389721 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
SPTB-203ENST00000389721 MT1BP07438 61 aa4.39□□□□□ -1.71
SPTB-203ENST00000389721 KRTAP9-8Q9BYQ0 159 aa4.35□□□□□ -1.71
SPTB-203ENST00000389721 KRTAP19-4Q3LI73 84 aa4.35□□□□□ -1.71
SPTB-203ENST00000389721 KRTAP12-4P60329 112 aa4.35□□□□□ -1.71
SPTB-203ENST00000389721 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.72
SPTB-203ENST00000389721 HSPG2P98160 4391 aa4.33□□□□□ -1.72
SPTB-203ENST00000389721 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
SPTB-203ENST00000389721 LPAP08519 4548 aa4.29□□□□□ -1.72
SPTB-203ENST00000389721 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
SPTB-203ENST00000389721 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
SPTB-203ENST00000389721 HERC1Q15751 4861 aa4.25□□□□□ -1.73
SPTB-203ENST00000389721 PKD1P98161 4303 aa4.24□□□□□ -1.73
SPTB-203ENST00000389721 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
SPTB-203ENST00000389721 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.73
SPTB-203ENST00000389721 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
SPTB-203ENST00000389721 RYR2Q92736 4967 aa4.19□□□□□ -1.74
SPTB-203ENST00000389721 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
SPTB-203ENST00000389721 TNXBP22105 4242 aa4.14□□□□□ -1.75
SPTB-203ENST00000389721 HYDINQ4G0P3 5121 aa4.13□□□□□ -1.75
SPTB-203ENST00000389721 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
SPTB-203ENST00000389721 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
SPTB-203ENST00000389721 MT4P47944 62 aa4.12□□□□□ -1.75
SPTB-203ENST00000389721 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
SPTB-203ENST00000389721 MT1LQ93083 61 aa4.07□□□□□ -1.76
SPTB-203ENST00000389721 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
SPTB-203ENST00000389721 MT1EP04732 61 aa4.03□□□□□ -1.76
SPTB-203ENST00000389721 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SPTB-203ENST00000389721 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
SPTB-203ENST00000389721 KIAA1109Q2LD37 5005 aa4□□□□□ -1.77
SPTB-203ENST00000389721 LRP2P98164 4655 aa3.97□□□□□ -1.77
SPTB-203ENST00000389721 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
SPTB-203ENST00000389721 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
SPTB-203ENST00000389721 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
SPTB-203ENST00000389721 HERC2O95714 4834 aa3.94□□□□□ -1.78
SPTB-203ENST00000389721 MT1MQ8N339 61 aa3.94□□□□□ -1.78
SPTB-203ENST00000389721 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SPTB-203ENST00000389721 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
SPTB-203ENST00000389721 PRM1P04553 51 aa3.9□□□□□ -1.79
SPTB-203ENST00000389721 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms