RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 ZANQ9Y493 2812 aa1.95□□□□□ -2.1
PTCD2-202ENST00000380639 VWFP04275 2813 aa1.95□□□□□ -2.1
PTCD2-202ENST00000380639 FRAS1Q86XX4 4008 aa1.95□□□□□ -2.1
PTCD2-202ENST00000380639 ZNF469Q96JG9 3925 aaPredicted RBP1.94□□□□□ -2.1
PTCD2-202ENST00000380639 TENM4Q6N022 2769 aa1.94□□□□□ -2.1
PTCD2-202ENST00000380639 COL7A1Q02388 2944 aa1.93□□□□□ -2.1
PTCD2-202ENST00000380639 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
PTCD2-202ENST00000380639 HECTD4Q9Y4D8 3996 aa1.88□□□□□ -2.11
PTCD2-202ENST00000380639 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
PTCD2-202ENST00000380639 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
PTCD2-202ENST00000380639 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
PTCD2-202ENST00000380639 KMT2AQ03164 3969 aa1.85□□□□□ -2.11
PTCD2-202ENST00000380639 HERC1Q15751 4861 aa1.82□□□□□ -2.12
PTCD2-202ENST00000380639 LCE3BQ5TA77 95 aa1.81□□□□□ -2.12
PTCD2-202ENST00000380639 DNAH3Q8TD57 4116 aa1.8□□□□□ -2.12
PTCD2-202ENST00000380639 LORP23490 312 aaPredicted RBP1.79□□□□□ -2.12
PTCD2-202ENST00000380639 DNAH6Q9C0G6 4158 aa1.79□□□□□ -2.12
PTCD2-202ENST00000380639 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
PTCD2-202ENST00000380639 FBN3Q75N90 2809 aa1.78□□□□□ -2.12
PTCD2-202ENST00000380639 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
PTCD2-202ENST00000380639 VPS13BQ7Z7G8 4022 aa1.74□□□□□ -2.13
PTCD2-202ENST00000380639 SPRR2GQ9BYE4 73 aa1.73□□□□□ -2.13
PTCD2-202ENST00000380639 PRM1P04553 51 aa1.7□□□□□ -2.14
PTCD2-202ENST00000380639 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
PTCD2-202ENST00000380639 LCE2CQ5TA81 110 aa1.69□□□□□ -2.14
PTCD2-202ENST00000380639 LCE4AQ5TA78 99 aa1.68□□□□□ -2.14
PTCD2-202ENST00000380639 MT1HL1P0DM35 61 aa1.68□□□□□ -2.14
PTCD2-202ENST00000380639 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
PTCD2-202ENST00000380639 PRKDCP78527 4128 aaKnown RBP1.66□□□□□ -2.14
PTCD2-202ENST00000380639 RYR1P21817 5038 aa1.66□□□□□ -2.14
PTCD2-202ENST00000380639 ANK3Q12955 4377 aaKnown RBP1.66□□□□□ -2.14
PTCD2-202ENST00000380639 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
PTCD2-202ENST00000380639 VPS13DQ5THJ4 4388 aa1.65□□□□□ -2.14
PTCD2-202ENST00000380639 KRTAP4-5Q9BYR2 181 aa1.65□□□□□ -2.15
PTCD2-202ENST00000380639 PKHD1P08F94 4074 aa1.64□□□□□ -2.15
PTCD2-202ENST00000380639 FLGP20930 4061 aaPredicted RBP1.61□□□□□ -2.15
PTCD2-202ENST00000380639 DNAH2Q9P225 4427 aa1.6□□□□□ -2.15
PTCD2-202ENST00000380639 DYNC1H1Q14204 4646 aaKnown RBP1.58□□□□□ -2.16
PTCD2-202ENST00000380639 MT1GP13640 62 aa1.58□□□□□ -2.16
PTCD2-202ENST00000380639 HUWE1Q7Z6Z7 4374 aaKnown RBP1.58□□□□□ -2.16
PTCD2-202ENST00000380639 LCE2BO14633 110 aa1.57□□□□□ -2.16
PTCD2-202ENST00000380639 SPRR2EP22531 72 aa1.57□□□□□ -2.16
PTCD2-202ENST00000380639 SPRR2BP35325 72 aa1.57□□□□□ -2.16
PTCD2-202ENST00000380639 SPRR2AP35326 72 aa1.57□□□□□ -2.16
PTCD2-202ENST00000380639 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
PTCD2-202ENST00000380639 DNAH10Q8IVF4 4471 aa1.55□□□□□ -2.16
PTCD2-202ENST00000380639 RYR2Q92736 4967 aa1.55□□□□□ -2.16
PTCD2-202ENST00000380639 DNAH1Q9P2D7 4330 aa1.54□□□□□ -2.16
PTCD2-202ENST00000380639 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
PTCD2-202ENST00000380639 PLECQ15149 4684 aaKnown RBP1.54□□□□□ -2.16
PTCD2-202ENST00000380639 DYNC2H1Q8NCM8 4307 aaKnown RBP1.52□□□□□ -2.17
PTCD2-202ENST00000380639 SPRR2DP22532 72 aa1.52□□□□□ -2.17
PTCD2-202ENST00000380639 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
PTCD2-202ENST00000380639 SACSQ9NZJ4 4579 aa1.5□□□□□ -2.17
PTCD2-202ENST00000380639 LCE1DQ5T752 114 aa1.5□□□□□ -2.17
PTCD2-202ENST00000380639 KRTAP4-1Q9BYQ7 146 aa1.5□□□□□ -2.17
PTCD2-202ENST00000380639 DNHD1Q96M86 4753 aa1.49□□□□□ -2.17
PTCD2-202ENST00000380639 LCE2DQ5TA82 110 aaPredicted RBP1.49□□□□□ -2.17
PTCD2-202ENST00000380639 MT1HP80294 61 aa1.49□□□□□ -2.17
PTCD2-202ENST00000380639 DNAH17Q9UFH2 4485 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 MT2AP02795 61 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 FAT2Q9NYQ8 4349 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 LCE1CQ5T751 118 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 LCE1EQ5T753 118 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 LCE1FQ5T754 118 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 LCE1AQ5T7P2 110 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 ABCA13Q86UQ4 5058 aa1.47□□□□□ -2.17
PTCD2-202ENST00000380639 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.17
PTCD2-202ENST00000380639 PKHD1L1Q86WI1 4243 aa1.46□□□□□ -2.18
PTCD2-202ENST00000380639 HSPG2P98160 4391 aa1.46□□□□□ -2.18
PTCD2-202ENST00000380639 DNAH9Q9NYC9 4486 aa1.46□□□□□ -2.18
PTCD2-202ENST00000380639 KMT2CQ8NEZ4 4911 aaKnown RBP1.45□□□□□ -2.18
PTCD2-202ENST00000380639 FAT1Q14517 4588 aa1.45□□□□□ -2.18
PTCD2-202ENST00000380639 RYR3Q15413 4870 aa1.45□□□□□ -2.18
PTCD2-202ENST00000380639 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
PTCD2-202ENST00000380639 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
PTCD2-202ENST00000380639 HERC2O95714 4834 aa1.45□□□□□ -2.18
PTCD2-202ENST00000380639 LCE5AQ5TCM9 118 aa1.44□□□□□ -2.18
PTCD2-202ENST00000380639 APOBP04114 4563 aaKnown RBP1.44□□□□□ -2.18
PTCD2-202ENST00000380639 PKD1P98161 4303 aa1.44□□□□□ -2.18
PTCD2-202ENST00000380639 MT1FP04733 61 aa1.44□□□□□ -2.18
PTCD2-202ENST00000380639 MYCBP2O75592 4640 aa1.42□□□□□ -2.18
PTCD2-202ENST00000380639 FAT3Q8TDW7 4589 aa1.41□□□□□ -2.18
PTCD2-202ENST00000380639 PCLOQ9Y6V0 5065 aa1.41□□□□□ -2.18
PTCD2-202ENST00000380639 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.18
PTCD2-202ENST00000380639 TNXBP22105 4242 aa1.39□□□□□ -2.19
PTCD2-202ENST00000380639 MT4P47944 62 aa1.39□□□□□ -2.19
PTCD2-202ENST00000380639 LCE2AQ5TA79 106 aaPredicted RBP1.39□□□□□ -2.19
PTCD2-202ENST00000380639 STARD9Q9P2P6 4700 aa1.38□□□□□ -2.19
PTCD2-202ENST00000380639 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
PTCD2-202ENST00000380639 EPPK1P58107 5090 aaKnown RBP1.36□□□□□ -2.19
PTCD2-202ENST00000380639 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
PTCD2-202ENST00000380639 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP17-1Q9BYP8 105 aa1.32□□□□□ -2.2
PTCD2-202ENST00000380639 MT1LQ93083 61 aa1.31□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP19-1Q8IUB9 90 aa1.31□□□□□ -2.2
PTCD2-202ENST00000380639 MT1XP80297 61 aa1.3□□□□□ -2.2
PTCD2-202ENST00000380639 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
PTCD2-202ENST00000380639 KRTAP4-8A0A0G2JLE6 195 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms