RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 DNAH1Q9P2D7 4330 aa8.57□□□□□ -1.04
PCDH8-202ENST00000377942 ZNF469Q96JG9 3925 aaPredicted RBP8.54□□□□□ -1.04
PCDH8-202ENST00000377942 DNHD1Q96M86 4753 aa8.54□□□□□ -1.04
PCDH8-202ENST00000377942 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
PCDH8-202ENST00000377942 KRTAP23-1A1A580 65 aa8.48□□□□□ -1.05
PCDH8-202ENST00000377942 VPS13DQ5THJ4 4388 aa8.47□□□□□ -1.05
PCDH8-202ENST00000377942 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
PCDH8-202ENST00000377942 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
PCDH8-202ENST00000377942 KRTAP12-3P60328 96 aa8.36□□□□□ -1.07
PCDH8-202ENST00000377942 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
PCDH8-202ENST00000377942 KRTAP4-1Q9BYQ7 146 aa8.34□□□□□ -1.08
PCDH8-202ENST00000377942 DNAH2Q9P225 4427 aa8.33□□□□□ -1.08
PCDH8-202ENST00000377942 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
PCDH8-202ENST00000377942 MT1HP80294 61 aa8.24□□□□□ -1.09
PCDH8-202ENST00000377942 LRP1BQ9NZR2 4599 aa8.23□□□□□ -1.09
PCDH8-202ENST00000377942 CSMD3Q7Z407 3707 aa8.21□□□□□ -1.09
PCDH8-202ENST00000377942 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.1
PCDH8-202ENST00000377942 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
PCDH8-202ENST00000377942 FAT1Q14517 4588 aa8.11□□□□□ -1.11
PCDH8-202ENST00000377942 RYR1P21817 5038 aa8.11□□□□□ -1.11
PCDH8-202ENST00000377942 MT2AP02795 61 aa8.1□□□□□ -1.11
PCDH8-202ENST00000377942 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
PCDH8-202ENST00000377942 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
PCDH8-202ENST00000377942 SACSQ9NZJ4 4579 aa8.07□□□□□ -1.12
PCDH8-202ENST00000377942 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
PCDH8-202ENST00000377942 KRTAP8-1Q8IUC2 63 aa8.06□□□□□ -1.12
PCDH8-202ENST00000377942 INE1O15225 51 aa8.02□□□□□ -1.13
PCDH8-202ENST00000377942 DNAH3Q8TD57 4116 aa8.02□□□□□ -1.13
PCDH8-202ENST00000377942 ANK2Q01484 3957 aa7.97□□□□□ -1.13
PCDH8-202ENST00000377942 PRKDCP78527 4128 aaKnown RBP7.97□□□□□ -1.13
PCDH8-202ENST00000377942 MT1FP04733 61 aa7.91□□□□□ -1.14
PCDH8-202ENST00000377942 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
PCDH8-202ENST00000377942 APOBP04114 4563 aaKnown RBP7.8□□□□□ -1.16
PCDH8-202ENST00000377942 RYR3Q15413 4870 aa7.79□□□□□ -1.16
PCDH8-202ENST00000377942 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
PCDH8-202ENST00000377942 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
PCDH8-202ENST00000377942 DNAH6Q9C0G6 4158 aa7.77□□□□□ -1.17
PCDH8-202ENST00000377942 RYR2Q92736 4967 aa7.71□□□□□ -1.18
PCDH8-202ENST00000377942 KMT2AQ03164 3969 aa7.68□□□□□ -1.18
PCDH8-202ENST00000377942 VPS13BQ7Z7G8 4022 aa7.62□□□□□ -1.19
PCDH8-202ENST00000377942 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
PCDH8-202ENST00000377942 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
PCDH8-202ENST00000377942 KRTAP19-4Q3LI73 84 aa7.55□□□□□ -1.2
PCDH8-202ENST00000377942 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
PCDH8-202ENST00000377942 SPRR2FQ96RM1 72 aa7.5□□□□□ -1.21
PCDH8-202ENST00000377942 KRTAP19-5Q3LI72 72 aa7.49□□□□□ -1.21
PCDH8-202ENST00000377942 DNAH7Q8WXX0 4024 aa7.49□□□□□ -1.21
PCDH8-202ENST00000377942 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
PCDH8-202ENST00000377942 LYSTQ99698 3801 aa7.47□□□□□ -1.21
PCDH8-202ENST00000377942 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.22
PCDH8-202ENST00000377942 BIRC6Q9NR09 4857 aa7.45□□□□□ -1.22
PCDH8-202ENST00000377942 MYCBP2O75592 4640 aa7.43□□□□□ -1.22
PCDH8-202ENST00000377942 HERC2O95714 4834 aa7.39□□□□□ -1.23
PCDH8-202ENST00000377942 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
PCDH8-202ENST00000377942 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
PCDH8-202ENST00000377942 HERC1Q15751 4861 aa7.38□□□□□ -1.23
PCDH8-202ENST00000377942 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
PCDH8-202ENST00000377942 KRTAP9-8Q9BYQ0 159 aa7.33□□□□□ -1.24
PCDH8-202ENST00000377942 HSPG2P98160 4391 aa7.32□□□□□ -1.24
PCDH8-202ENST00000377942 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
PCDH8-202ENST00000377942 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
PCDH8-202ENST00000377942 MT1BP07438 61 aa7.26□□□□□ -1.25
PCDH8-202ENST00000377942 MT1XP80297 61 aa7.25□□□□□ -1.25
PCDH8-202ENST00000377942 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
PCDH8-202ENST00000377942 PKD1P98161 4303 aa7.17□□□□□ -1.26
PCDH8-202ENST00000377942 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
PCDH8-202ENST00000377942 HYDINQ4G0P3 5121 aa7.13□□□□□ -1.27
PCDH8-202ENST00000377942 PCLOQ9Y6V0 5065 aa7.1□□□□□ -1.27
PCDH8-202ENST00000377942 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
PCDH8-202ENST00000377942 LRP2P98164 4655 aa7.06□□□□□ -1.28
PCDH8-202ENST00000377942 SPRR2EP22531 72 aa7.05□□□□□ -1.28
PCDH8-202ENST00000377942 SPRR2BP35325 72 aa7.05□□□□□ -1.28
PCDH8-202ENST00000377942 SPRR2AP35326 72 aa7.05□□□□□ -1.28
PCDH8-202ENST00000377942 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
PCDH8-202ENST00000377942 MT1GP13640 62 aa6.91□□□□□ -1.3
PCDH8-202ENST00000377942 PKHD1P08F94 4074 aa6.91□□□□□ -1.3
PCDH8-202ENST00000377942 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
PCDH8-202ENST00000377942 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
PCDH8-202ENST00000377942 LCE2BO14633 110 aa6.84□□□□□ -1.31
PCDH8-202ENST00000377942 SPRR2DP22532 72 aa6.84□□□□□ -1.31
PCDH8-202ENST00000377942 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
PCDH8-202ENST00000377942 KMT2CQ8NEZ4 4911 aaKnown RBP6.74□□□□□ -1.33
PCDH8-202ENST00000377942 MUC17Q685J3 4493 aa6.71□□□□□ -1.33
PCDH8-202ENST00000377942 LPAP08519 4548 aa6.7□□□□□ -1.34
PCDH8-202ENST00000377942 TNXBP22105 4242 aa6.69□□□□□ -1.34
PCDH8-202ENST00000377942 KRTAP12-4P60329 112 aa6.67□□□□□ -1.34
PCDH8-202ENST00000377942 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.35
PCDH8-202ENST00000377942 KRTAP19-3Q7Z4W3 81 aa6.65□□□□□ -1.35
PCDH8-202ENST00000377942 EPPK1P58107 5090 aaKnown RBP6.63□□□□□ -1.35
PCDH8-202ENST00000377942 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
PCDH8-202ENST00000377942 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
PCDH8-202ENST00000377942 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
PCDH8-202ENST00000377942 MT1LQ93083 61 aa6.55□□□□□ -1.36
PCDH8-202ENST00000377942 MT1EP04732 61 aa6.55□□□□□ -1.36
PCDH8-202ENST00000377942 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
PCDH8-202ENST00000377942 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
PCDH8-202ENST00000377942 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
PCDH8-202ENST00000377942 FAT4Q6V0I7 4981 aa6.36□□□□□ -1.39
PCDH8-202ENST00000377942 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
PCDH8-202ENST00000377942 MT1MQ8N339 61 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms