RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
CNTNAP3-204ENST00000377656 PLECQ15149 4684 aaKnown RBP7.66□□□□□ -1.18
CNTNAP3-204ENST00000377656 DNAH5Q8TE73 4624 aa7.65□□□□□ -1.19
CNTNAP3-204ENST00000377656 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.19
CNTNAP3-204ENST00000377656 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
CNTNAP3-204ENST00000377656 INE1O15225 51 aa7.6□□□□□ -1.19
CNTNAP3-204ENST00000377656 DNAH17Q9UFH2 4485 aa7.59□□□□□ -1.19
CNTNAP3-204ENST00000377656 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.2
CNTNAP3-204ENST00000377656 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
CNTNAP3-204ENST00000377656 VPS13DQ5THJ4 4388 aa7.57□□□□□ -1.2
CNTNAP3-204ENST00000377656 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
CNTNAP3-204ENST00000377656 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
CNTNAP3-204ENST00000377656 DNHD1Q96M86 4753 aa7.51□□□□□ -1.21
CNTNAP3-204ENST00000377656 DNAH2Q9P225 4427 aa7.37□□□□□ -1.23
CNTNAP3-204ENST00000377656 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
CNTNAP3-204ENST00000377656 DYNC1H1Q14204 4646 aaKnown RBP7.33□□□□□ -1.24
CNTNAP3-204ENST00000377656 STARD9Q9P2P6 4700 aa7.32□□□□□ -1.24
CNTNAP3-204ENST00000377656 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
CNTNAP3-204ENST00000377656 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
CNTNAP3-204ENST00000377656 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
CNTNAP3-204ENST00000377656 LRP1BQ9NZR2 4599 aa7.28□□□□□ -1.24
CNTNAP3-204ENST00000377656 FAT1Q14517 4588 aa7.27□□□□□ -1.25
CNTNAP3-204ENST00000377656 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
CNTNAP3-204ENST00000377656 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
CNTNAP3-204ENST00000377656 MT1HP80294 61 aa7.2□□□□□ -1.26
CNTNAP3-204ENST00000377656 MT2AP02795 61 aa7.14□□□□□ -1.27
CNTNAP3-204ENST00000377656 RYR1P21817 5038 aa7.12□□□□□ -1.27
CNTNAP3-204ENST00000377656 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
CNTNAP3-204ENST00000377656 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
CNTNAP3-204ENST00000377656 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
CNTNAP3-204ENST00000377656 ANK2Q01484 3957 aa7.07□□□□□ -1.28
CNTNAP3-204ENST00000377656 PRKDCP78527 4128 aaKnown RBP7.05□□□□□ -1.28
CNTNAP3-204ENST00000377656 KMT2AQ03164 3969 aa7□□□□□ -1.29
CNTNAP3-204ENST00000377656 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
CNTNAP3-204ENST00000377656 MT1FP04733 61 aa6.97□□□□□ -1.29
CNTNAP3-204ENST00000377656 VPS13BQ7Z7G8 4022 aa6.97□□□□□ -1.29
CNTNAP3-204ENST00000377656 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
CNTNAP3-204ENST00000377656 LYSTQ99698 3801 aa6.88□□□□□ -1.31
CNTNAP3-204ENST00000377656 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
CNTNAP3-204ENST00000377656 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
CNTNAP3-204ENST00000377656 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
CNTNAP3-204ENST00000377656 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
CNTNAP3-204ENST00000377656 FRAS1Q86XX4 4008 aa6.79□□□□□ -1.32
CNTNAP3-204ENST00000377656 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
CNTNAP3-204ENST00000377656 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
CNTNAP3-204ENST00000377656 KRTAP10-7P60409 375 aaPredicted RBP6.72□□□□□ -1.33
CNTNAP3-204ENST00000377656 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
CNTNAP3-204ENST00000377656 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
CNTNAP3-204ENST00000377656 RYR3Q15413 4870 aa6.69□□□□□ -1.34
CNTNAP3-204ENST00000377656 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
CNTNAP3-204ENST00000377656 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
CNTNAP3-204ENST00000377656 LRP1Q07954 4544 aaKnown RBP6.66□□□□□ -1.34
CNTNAP3-204ENST00000377656 RYR2Q92736 4967 aa6.64□□□□□ -1.35
CNTNAP3-204ENST00000377656 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
CNTNAP3-204ENST00000377656 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
CNTNAP3-204ENST00000377656 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
CNTNAP3-204ENST00000377656 HERC2O95714 4834 aa6.46□□□□□ -1.37
CNTNAP3-204ENST00000377656 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
CNTNAP3-204ENST00000377656 LRP2P98164 4655 aa6.43□□□□□ -1.38
CNTNAP3-204ENST00000377656 HYDINQ4G0P3 5121 aa6.43□□□□□ -1.38
CNTNAP3-204ENST00000377656 MT1XP80297 61 aa6.4□□□□□ -1.39
CNTNAP3-204ENST00000377656 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
CNTNAP3-204ENST00000377656 MT1BP07438 61 aa6.36□□□□□ -1.39
CNTNAP3-204ENST00000377656 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.4
CNTNAP3-204ENST00000377656 HSPG2P98160 4391 aa6.32□□□□□ -1.4
CNTNAP3-204ENST00000377656 SPRR2EP22531 72 aa6.31□□□□□ -1.4
CNTNAP3-204ENST00000377656 SPRR2BP35325 72 aa6.31□□□□□ -1.4
CNTNAP3-204ENST00000377656 SPRR2AP35326 72 aa6.31□□□□□ -1.4
CNTNAP3-204ENST00000377656 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
CNTNAP3-204ENST00000377656 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
CNTNAP3-204ENST00000377656 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
CNTNAP3-204ENST00000377656 PKD1P98161 4303 aa6.27□□□□□ -1.41
CNTNAP3-204ENST00000377656 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
CNTNAP3-204ENST00000377656 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
CNTNAP3-204ENST00000377656 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
CNTNAP3-204ENST00000377656 KRTAP4-8A0A0G2JLE6 195 aa6.17□□□□□ -1.42
CNTNAP3-204ENST00000377656 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
CNTNAP3-204ENST00000377656 HERC1Q15751 4861 aa6.17□□□□□ -1.42
CNTNAP3-204ENST00000377656 MT1GP13640 62 aa6.17□□□□□ -1.42
CNTNAP3-204ENST00000377656 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
CNTNAP3-204ENST00000377656 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
CNTNAP3-204ENST00000377656 LCE2BO14633 110 aa6.11□□□□□ -1.43
CNTNAP3-204ENST00000377656 SPRR2DP22532 72 aa6.1□□□□□ -1.43
CNTNAP3-204ENST00000377656 TNXBP22105 4242 aa6.08□□□□□ -1.44
CNTNAP3-204ENST00000377656 LPAP08519 4548 aa6.06□□□□□ -1.44
CNTNAP3-204ENST00000377656 KRTAP12-4P60329 112 aa6.05□□□□□ -1.44
CNTNAP3-204ENST00000377656 EPPK1P58107 5090 aaKnown RBP6.02□□□□□ -1.45
CNTNAP3-204ENST00000377656 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
CNTNAP3-204ENST00000377656 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
CNTNAP3-204ENST00000377656 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
CNTNAP3-204ENST00000377656 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
CNTNAP3-204ENST00000377656 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
CNTNAP3-204ENST00000377656 MT1LQ93083 61 aa5.82□□□□□ -1.48
CNTNAP3-204ENST00000377656 ABCA13Q86UQ4 5058 aa5.82□□□□□ -1.48
CNTNAP3-204ENST00000377656 MT1EP04732 61 aa5.78□□□□□ -1.48
CNTNAP3-204ENST00000377656 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
CNTNAP3-204ENST00000377656 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
CNTNAP3-204ENST00000377656 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
CNTNAP3-204ENST00000377656 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
CNTNAP3-204ENST00000377656 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms