RNA–Protein interactions for RNA: ENST00000377038.7

DFFA-202, Transcript of DNA fragmentation factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DFFA, Length 6,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-202ENST00000377038 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
DFFA-202ENST00000377038 DNAH11Q96DT5 4516 aa6.07□□□□□ -1.44
DFFA-202ENST00000377038 STARD9Q9P2P6 4700 aa6.06□□□□□ -1.44
DFFA-202ENST00000377038 ANK2Q01484 3957 aa6.04□□□□□ -1.44
DFFA-202ENST00000377038 KRTAP3-2Q9BYR7 98 aa6.03□□□□□ -1.44
DFFA-202ENST00000377038 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
DFFA-202ENST00000377038 DNAH10Q8IVF4 4471 aa6.02□□□□□ -1.45
DFFA-202ENST00000377038 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
DFFA-202ENST00000377038 DYNC1H1Q14204 4646 aaKnown RBP5.98□□□□□ -1.45
DFFA-202ENST00000377038 LRP1BQ9NZR2 4599 aa5.95□□□□□ -1.46
DFFA-202ENST00000377038 DNAH3Q8TD57 4116 aa5.92□□□□□ -1.46
DFFA-202ENST00000377038 DNAH2Q9P225 4427 aa5.91□□□□□ -1.46
DFFA-202ENST00000377038 FAT2Q9NYQ8 4349 aa5.87□□□□□ -1.47
DFFA-202ENST00000377038 FAT1Q14517 4588 aa5.87□□□□□ -1.47
DFFA-202ENST00000377038 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
DFFA-202ENST00000377038 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
DFFA-202ENST00000377038 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
DFFA-202ENST00000377038 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
DFFA-202ENST00000377038 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
DFFA-202ENST00000377038 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
DFFA-202ENST00000377038 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
DFFA-202ENST00000377038 RYR1P21817 5038 aa5.8□□□□□ -1.48
DFFA-202ENST00000377038 SACSQ9NZJ4 4579 aa5.77□□□□□ -1.49
DFFA-202ENST00000377038 MT1HP80294 61 aa5.71□□□□□ -1.5
DFFA-202ENST00000377038 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
DFFA-202ENST00000377038 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
DFFA-202ENST00000377038 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
DFFA-202ENST00000377038 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
DFFA-202ENST00000377038 LYSTQ99698 3801 aa5.64□□□□□ -1.51
DFFA-202ENST00000377038 RYR3Q15413 4870 aa5.6□□□□□ -1.51
DFFA-202ENST00000377038 LCE3AQ5TA76 89 aa5.59□□□□□ -1.51
DFFA-202ENST00000377038 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
DFFA-202ENST00000377038 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
DFFA-202ENST00000377038 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
DFFA-202ENST00000377038 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
DFFA-202ENST00000377038 MT2AP02795 61 aa5.57□□□□□ -1.52
DFFA-202ENST00000377038 DNAH7Q8WXX0 4024 aa5.55□□□□□ -1.52
DFFA-202ENST00000377038 RYR2Q92736 4967 aa5.52□□□□□ -1.53
DFFA-202ENST00000377038 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
DFFA-202ENST00000377038 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
DFFA-202ENST00000377038 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
DFFA-202ENST00000377038 MT1FP04733 61 aa5.47□□□□□ -1.53
DFFA-202ENST00000377038 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
DFFA-202ENST00000377038 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
DFFA-202ENST00000377038 HYDINQ4G0P3 5121 aa5.44□□□□□ -1.54
DFFA-202ENST00000377038 LRP1Q07954 4544 aaKnown RBP5.42□□□□□ -1.54
DFFA-202ENST00000377038 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
DFFA-202ENST00000377038 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
DFFA-202ENST00000377038 HSPG2P98160 4391 aa5.36□□□□□ -1.55
DFFA-202ENST00000377038 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
DFFA-202ENST00000377038 HERC2O95714 4834 aa5.32□□□□□ -1.56
DFFA-202ENST00000377038 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
DFFA-202ENST00000377038 PKD1P98161 4303 aa5.21□□□□□ -1.58
DFFA-202ENST00000377038 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.58
DFFA-202ENST00000377038 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
DFFA-202ENST00000377038 KMT2CQ8NEZ4 4911 aaKnown RBP5.14□□□□□ -1.59
DFFA-202ENST00000377038 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
DFFA-202ENST00000377038 LRP2P98164 4655 aa5.11□□□□□ -1.59
DFFA-202ENST00000377038 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
DFFA-202ENST00000377038 INE1O15225 51 aa5.1□□□□□ -1.59
DFFA-202ENST00000377038 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
DFFA-202ENST00000377038 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
DFFA-202ENST00000377038 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
DFFA-202ENST00000377038 HERC1Q15751 4861 aa5.08□□□□□ -1.6
DFFA-202ENST00000377038 LPAP08519 4548 aa5.07□□□□□ -1.6
DFFA-202ENST00000377038 PCLOQ9Y6V0 5065 aa5.05□□□□□ -1.6
DFFA-202ENST00000377038 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
DFFA-202ENST00000377038 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
DFFA-202ENST00000377038 TNXBP22105 4242 aa5.01□□□□□ -1.61
DFFA-202ENST00000377038 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
DFFA-202ENST00000377038 MT1BP07438 61 aa4.99□□□□□ -1.61
DFFA-202ENST00000377038 MT1XP80297 61 aa4.98□□□□□ -1.61
DFFA-202ENST00000377038 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
DFFA-202ENST00000377038 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
DFFA-202ENST00000377038 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.63
DFFA-202ENST00000377038 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
DFFA-202ENST00000377038 SPRR2EP22531 72 aa4.86□□□□□ -1.63
DFFA-202ENST00000377038 SPRR2BP35325 72 aa4.86□□□□□ -1.63
DFFA-202ENST00000377038 SPRR2AP35326 72 aa4.86□□□□□ -1.63
DFFA-202ENST00000377038 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
DFFA-202ENST00000377038 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
DFFA-202ENST00000377038 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
DFFA-202ENST00000377038 LCE2BO14633 110 aa4.77□□□□□ -1.65
DFFA-202ENST00000377038 MUC17Q685J3 4493 aa4.72□□□□□ -1.65
DFFA-202ENST00000377038 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.66
DFFA-202ENST00000377038 SPRR2DP22532 72 aa4.7□□□□□ -1.66
DFFA-202ENST00000377038 MT1GP13640 62 aa4.64□□□□□ -1.67
DFFA-202ENST00000377038 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.68
DFFA-202ENST00000377038 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.68
DFFA-202ENST00000377038 RNF213Q63HN8 5207 aa4.58□□□□□ -1.68
DFFA-202ENST00000377038 LCE2AQ5TA79 106 aaPredicted RBP4.57□□□□□ -1.68
DFFA-202ENST00000377038 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
DFFA-202ENST00000377038 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
DFFA-202ENST00000377038 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
DFFA-202ENST00000377038 HMCN2Q8NDA2 5059 aa4.48□□□□□ -1.69
DFFA-202ENST00000377038 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
DFFA-202ENST00000377038 MT1EP04732 61 aa4.46□□□□□ -1.69
DFFA-202ENST00000377038 LCE2DQ5TA82 110 aaPredicted RBP4.46□□□□□ -1.69
DFFA-202ENST00000377038 MT1LQ93083 61 aa4.46□□□□□ -1.7
DFFA-202ENST00000377038 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms