RNA–Protein interactions for RNA: ENST00000375244.7

TNXB-201, Transcript of tenascin XB, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNXB, Length 13,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-201ENST00000375244 HUWE1Q7Z6Z7 4374 aaKnown RBP4.9□□□□□ -1.63
TNXB-201ENST00000375244 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
TNXB-201ENST00000375244 CRCT1Q9UGL9 99 aa4.85□□□□□ -1.63
TNXB-201ENST00000375244 CSMD2Q7Z408 3487 aa4.81□□□□□ -1.64
TNXB-201ENST00000375244 FRAS1Q86XX4 4008 aa4.78□□□□□ -1.64
TNXB-201ENST00000375244 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
TNXB-201ENST00000375244 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
TNXB-201ENST00000375244 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
TNXB-201ENST00000375244 FLGP20930 4061 aaPredicted RBP4.71□□□□□ -1.66
TNXB-201ENST00000375244 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
TNXB-201ENST00000375244 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
TNXB-201ENST00000375244 VPS13DQ5THJ4 4388 aa4.67□□□□□ -1.66
TNXB-201ENST00000375244 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
TNXB-201ENST00000375244 PRKDCP78527 4128 aaKnown RBP4.65□□□□□ -1.67
TNXB-201ENST00000375244 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
TNXB-201ENST00000375244 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
TNXB-201ENST00000375244 MT1HL1P0DM35 61 aa4.57□□□□□ -1.68
TNXB-201ENST00000375244 KRTAP10-5P60370 271 aa4.56□□□□□ -1.68
TNXB-201ENST00000375244 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
TNXB-201ENST00000375244 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
TNXB-201ENST00000375244 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
TNXB-201ENST00000375244 FAT2Q9NYQ8 4349 aa4.38□□□□□ -1.71
TNXB-201ENST00000375244 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
TNXB-201ENST00000375244 DNAH9Q9NYC9 4486 aa4.37□□□□□ -1.71
TNXB-201ENST00000375244 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
TNXB-201ENST00000375244 KRTAP10-4P60372 401 aaPredicted RBP4.34□□□□□ -1.72
TNXB-201ENST00000375244 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
TNXB-201ENST00000375244 PKHD1P08F94 4074 aa4.31□□□□□ -1.72
TNXB-201ENST00000375244 PKHD1L1Q86WI1 4243 aa4.27□□□□□ -1.73
TNXB-201ENST00000375244 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
TNXB-201ENST00000375244 PLECQ15149 4684 aaKnown RBP4.24□□□□□ -1.73
TNXB-201ENST00000375244 KRTAP10-7P60409 375 aaPredicted RBP4.16□□□□□ -1.74
TNXB-201ENST00000375244 LRP1Q07954 4544 aaKnown RBP4.15□□□□□ -1.75
TNXB-201ENST00000375244 DNAH5Q8TE73 4624 aa4.13□□□□□ -1.75
TNXB-201ENST00000375244 DYNC1H1Q14204 4646 aaKnown RBP4.12□□□□□ -1.75
TNXB-201ENST00000375244 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
TNXB-201ENST00000375244 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
TNXB-201ENST00000375244 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
TNXB-201ENST00000375244 STARD9Q9P2P6 4700 aa4.08□□□□□ -1.76
TNXB-201ENST00000375244 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
TNXB-201ENST00000375244 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
TNXB-201ENST00000375244 MT1HP80294 61 aa4.06□□□□□ -1.76
TNXB-201ENST00000375244 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
TNXB-201ENST00000375244 PKD1P98161 4303 aa4.05□□□□□ -1.76
TNXB-201ENST00000375244 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
TNXB-201ENST00000375244 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
TNXB-201ENST00000375244 FAT1Q14517 4588 aa4□□□□□ -1.77
TNXB-201ENST00000375244 TNXBP22105 4242 aa3.99□□□□□ -1.77
TNXB-201ENST00000375244 MT2AP02795 61 aa3.98□□□□□ -1.77
TNXB-201ENST00000375244 LRP1BQ9NZR2 4599 aa3.93□□□□□ -1.78
TNXB-201ENST00000375244 MT1FP04733 61 aa3.92□□□□□ -1.78
TNXB-201ENST00000375244 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
TNXB-201ENST00000375244 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
TNXB-201ENST00000375244 RYR1P21817 5038 aa3.89□□□□□ -1.79
TNXB-201ENST00000375244 HSPG2P98160 4391 aa3.88□□□□□ -1.79
TNXB-201ENST00000375244 SPRR2EP22531 72 aa3.83□□□□□ -1.8
TNXB-201ENST00000375244 SPRR2BP35325 72 aa3.83□□□□□ -1.8
TNXB-201ENST00000375244 SPRR2AP35326 72 aa3.83□□□□□ -1.8
TNXB-201ENST00000375244 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
TNXB-201ENST00000375244 MYCBP2O75592 4640 aa3.79□□□□□ -1.8
TNXB-201ENST00000375244 RYR3Q15413 4870 aa3.76□□□□□ -1.81
TNXB-201ENST00000375244 MT1GP13640 62 aa3.72□□□□□ -1.81
TNXB-201ENST00000375244 SPRR2DP22532 72 aa3.72□□□□□ -1.81
TNXB-201ENST00000375244 LCE2BO14633 110 aa3.71□□□□□ -1.82
TNXB-201ENST00000375244 MT1XP80297 61 aa3.67□□□□□ -1.82
TNXB-201ENST00000375244 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
TNXB-201ENST00000375244 DNHD1Q96M86 4753 aa3.65□□□□□ -1.82
TNXB-201ENST00000375244 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
TNXB-201ENST00000375244 KRTAP19-1Q8IUB9 90 aa3.6□□□□□ -1.83
TNXB-201ENST00000375244 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
TNXB-201ENST00000375244 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TNXB-201ENST00000375244 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
TNXB-201ENST00000375244 LCE2CQ5TA81 110 aa3.5□□□□□ -1.85
TNXB-201ENST00000375244 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
TNXB-201ENST00000375244 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
TNXB-201ENST00000375244 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
TNXB-201ENST00000375244 MT1BP07438 61 aa3.48□□□□□ -1.85
TNXB-201ENST00000375244 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
TNXB-201ENST00000375244 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
TNXB-201ENST00000375244 KRTAP9-8Q9BYQ0 159 aa3.43□□□□□ -1.86
TNXB-201ENST00000375244 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
TNXB-201ENST00000375244 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.87
TNXB-201ENST00000375244 MT1LQ93083 61 aa3.39□□□□□ -1.87
TNXB-201ENST00000375244 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
TNXB-201ENST00000375244 KMT2CQ8NEZ4 4911 aaKnown RBP3.38□□□□□ -1.87
TNXB-201ENST00000375244 RYR2Q92736 4967 aa3.37□□□□□ -1.87
TNXB-201ENST00000375244 PRM1P04553 51 aa3.36□□□□□ -1.87
TNXB-201ENST00000375244 LRP2P98164 4655 aa3.36□□□□□ -1.87
TNXB-201ENST00000375244 HERC2O95714 4834 aa3.35□□□□□ -1.87
TNXB-201ENST00000375244 MT4P47944 62 aa3.32□□□□□ -1.88
TNXB-201ENST00000375244 MT1EP04732 61 aa3.3□□□□□ -1.88
TNXB-201ENST00000375244 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
TNXB-201ENST00000375244 MT3P25713 68 aa3.29□□□□□ -1.88
TNXB-201ENST00000375244 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
TNXB-201ENST00000375244 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
TNXB-201ENST00000375244 MT1MQ8N339 61 aa3.24□□□□□ -1.89
TNXB-201ENST00000375244 HERC1Q15751 4861 aa3.22□□□□□ -1.89
TNXB-201ENST00000375244 LPAP08519 4548 aa3.21□□□□□ -1.9
TNXB-201ENST00000375244 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
TNXB-201ENST00000375244 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms