RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 UBL5Q9BZL1 73 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 FSIP2Q5CZC0 6907 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 IGKV4-1P06312 121 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 LINC00304Q8N9R0 145 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 LINC00472Q9H8W2 130 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 ACYP2P14621 99 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 SPINK7P58062 85 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 ABRACLQ9P1F3 81 aa1.17□□□□□ -2.22
CCDC7-204ENST00000375025 K7EMI3 77 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 NDUFA3O95167 84 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 MT1HP80294 61 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 KRTAP19-2Q3LHN2 52 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 Q6ZQY7 126 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 LPAP08519 4548 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 SYNE2Q8WXH0 6885 aaKnown RBP1.16□□□□□ -2.22
CCDC7-204ENST00000375025 TRGV2A0A075B6R0 118 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 TRAV1-2A0A0B4J238 106 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 NCR3O14931 201 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.16□□□□□ -2.22
CCDC7-204ENST00000375025 J3QRE1 110 aa1.15□□□□□ -2.23
CCDC7-204ENST00000375025 SPART-AS1P0CW21 52 aa1.15□□□□□ -2.23
CCDC7-204ENST00000375025 PP632Q6XCG6 107 aa1.15□□□□□ -2.23
CCDC7-204ENST00000375025 MACF1Q9UPN3 7388 aaKnown RBP1.15□□□□□ -2.23
CCDC7-204ENST00000375025 PLNP26678 52 aa1.15□□□□□ -2.23
CCDC7-204ENST00000375025 FCER1GP30273 86 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 ENHOQ6UWT2 76 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 SMIM27A0A1W2PRY6 76 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 SPINK13Q1W4C9 94 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 SPINK6Q6UWN8 80 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 SMIM11BQ8TCY0 68 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
CCDC7-204ENST00000375025 A0A1B0GU69 56 aa1.13□□□□□ -2.23
CCDC7-204ENST00000375025 LINC00959A0A1B0GUT2 108 aa1.13□□□□□ -2.23
CCDC7-204ENST00000375025 LINC01546A6NGU7 62 aa1.13□□□□□ -2.23
CCDC7-204ENST00000375025 RPL38P63173 70 aaKnown RBP1.13□□□□□ -2.23
CCDC7-204ENST00000375025 UNQ6190/PRO20217Q6UXQ8 127 aa1.13□□□□□ -2.23
CCDC7-204ENST00000375025 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
CCDC7-204ENST00000375025 KMT2DO14686 5537 aa1.12□□□□□ -2.23
CCDC7-204ENST00000375025 GVQW2A0A096LPI5 108 aaPredicted RBP1.12□□□□□ -2.23
CCDC7-204ENST00000375025 NDUFA4O00483 81 aa1.12□□□□□ -2.23
CCDC7-204ENST00000375025 COX7BP24311 80 aa1.12□□□□□ -2.23
CCDC7-204ENST00000375025 LINC00575Q6W349 94 aa1.12□□□□□ -2.23
CCDC7-204ENST00000375025 Q6ZRX8 168 aa1.12□□□□□ -2.23
CCDC7-204ENST00000375025 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
CCDC7-204ENST00000375025 IGIPA6NJ69 53 aa1.11□□□□□ -2.23
CCDC7-204ENST00000375025 G3V318 75 aa1.11□□□□□ -2.23
CCDC7-204ENST00000375025 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
CCDC7-204ENST00000375025 FLGP20930 4061 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-204ENST00000375025 ETDCA0A1B0GVM5 59 aa1.1□□□□□ -2.23
CCDC7-204ENST00000375025 CPSF4LA6NMK7 179 aaKnown RBP1.09□□□□□ -2.23
CCDC7-204ENST00000375025 TNCP24821 2201 aa1.09□□□□□ -2.23
CCDC7-204ENST00000375025 A8MTW9 85 aa1.09□□□□□ -2.23
CCDC7-204ENST00000375025 H0YGX0 51 aa1.09□□□□□ -2.23
CCDC7-204ENST00000375025 I3L3M4 83 aa1.09□□□□□ -2.23
CCDC7-204ENST00000375025 SNRPGP62308 76 aaKnown RBP1.09□□□□□ -2.23
CCDC7-204ENST00000375025 HAMPP81172 84 aa1.08□□□□□ -2.24
CCDC7-204ENST00000375025 SPRR5A0A1B0GTR4 108 aa1.07□□□□□ -2.24
CCDC7-204ENST00000375025 DEFB4AO15263 64 aa1.07□□□□□ -2.24
CCDC7-204ENST00000375025 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
CCDC7-204ENST00000375025 ARL14EPLP0DKL9 152 aa1.07□□□□□ -2.24
CCDC7-204ENST00000375025 RPL37P61927 97 aaKnown RBP1.07□□□□□ -2.24
CCDC7-204ENST00000375025 KRTAP13-4Q3LI77 160 aa1.07□□□□□ -2.24
CCDC7-204ENST00000375025 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
CCDC7-204ENST00000375025 SSBP3-AS1Q7Z2R9 100 aa1.06□□□□□ -2.24
CCDC7-204ENST00000375025 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
CCDC7-204ENST00000375025 LINC01556Q5JQF7 62 aa1.06□□□□□ -2.24
CCDC7-204ENST00000375025 FXYD6P3P58550 94 aa1.05□□□□□ -2.24
CCDC7-204ENST00000375025 A0A096LPF7 62 aa1.04□□□□□ -2.24
CCDC7-204ENST00000375025 COX6B2Q6YFQ2 88 aa1.04□□□□□ -2.24
CCDC7-204ENST00000375025 MUC12Q9UKN1 5478 aa1.04□□□□□ -2.24
CCDC7-204ENST00000375025 TMEM167BQ9NRX6 74 aa1.03□□□□□ -2.24
CCDC7-204ENST00000375025 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
CCDC7-204ENST00000375025 DEFB131AP59861 70 aa1.02□□□□□ -2.25
CCDC7-204ENST00000375025 LEAP2Q969E1 77 aa1.02□□□□□ -2.25
CCDC7-204ENST00000375025 K7EQZ3 153 aa1.01□□□□□ -2.25
CCDC7-204ENST00000375025 PCOTHQ58A44 107 aa1.01□□□□□ -2.25
CCDC7-204ENST00000375025 Q8IZM0 81 aa1.01□□□□□ -2.25
CCDC7-204ENST00000375025 RHPN1-AS1Q9BWJ2 59 aa1.01□□□□□ -2.25
CCDC7-204ENST00000375025 SPINK4O60575 86 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 MT2AP02795 61 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 HTN3P15516 51 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 CRIP1P50238 77 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 TP53AIP1Q9HCN2 124 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 PIGYQ3MUY2 71 aa1□□□□□ -2.25
CCDC7-204ENST00000375025 TIMM8BQ9Y5J9 83 aaPredicted RBP1□□□□□ -2.25
CCDC7-204ENST00000375025 I3L2K1 104 aa0.99□□□□□ -2.25
CCDC7-204ENST00000375025 LINC00158P58513 81 aa0.99□□□□□ -2.25
CCDC7-204ENST00000375025 CNFNQ9BYD5 112 aa0.99□□□□□ -2.25
CCDC7-204ENST00000375025 CDKN2A-AS1Q9UH64 79 aa0.99□□□□□ -2.25
CCDC7-204ENST00000375025 SMIM2Q9BVW6 85 aa0.99□□□□□ -2.25
CCDC7-204ENST00000375025 SPRR2EP22531 72 aa0.98□□□□□ -2.25
CCDC7-204ENST00000375025 SPRR2BP35325 72 aa0.98□□□□□ -2.25
CCDC7-204ENST00000375025 SPRR2AP35326 72 aa0.98□□□□□ -2.25
CCDC7-204ENST00000375025 MRPL34Q9BQ48 92 aaKnown RBP0.98□□□□□ -2.25
CCDC7-204ENST00000375025 RPS27LQ71UM5 84 aaKnown RBP0.98□□□□□ -2.25
CCDC7-204ENST00000375025 TMEM167AQ8TBQ9 72 aa0.98□□□□□ -2.25
CCDC7-204ENST00000375025 PRO0255Q9UI72 69 aa0.98□□□□□ -2.25
CCDC7-204ENST00000375025 LINC01590Q5TEZ4 76 aa0.97□□□□□ -2.25
CCDC7-204ENST00000375025 WFDC10BQ8IUB3 73 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms