RNA–Protein interactions for RNA: ENST00000373184.5

PTPRT-202, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-202ENST00000373184 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
PTPRT-202ENST00000373184 ANK3Q12955 4377 aaKnown RBP2.64□□□□□ -1.99
PTPRT-202ENST00000373184 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
PTPRT-202ENST00000373184 SVEP1Q4LDE5 3571 aa2.63□□□□□ -1.99
PTPRT-202ENST00000373184 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
PTPRT-202ENST00000373184 ZNF469Q96JG9 3925 aaPredicted RBP2.62□□□□□ -1.99
PTPRT-202ENST00000373184 MT3P25713 68 aa2.61□□□□□ -1.99
PTPRT-202ENST00000373184 MUC3AQ02505 3323 aa2.61□□□□□ -1.99
PTPRT-202ENST00000373184 CRCT1Q9UGL9 99 aa2.59□□□□□ -2
PTPRT-202ENST00000373184 DNAH6Q9C0G6 4158 aa2.58□□□□□ -2
PTPRT-202ENST00000373184 KRTAP4-5Q9BYR2 181 aa2.56□□□□□ -2
PTPRT-202ENST00000373184 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
PTPRT-202ENST00000373184 FRAS1Q86XX4 4008 aa2.53□□□□□ -2
PTPRT-202ENST00000373184 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2.01
PTPRT-202ENST00000373184 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
PTPRT-202ENST00000373184 LCE3AQ5TA76 89 aa2.51□□□□□ -2.01
PTPRT-202ENST00000373184 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
PTPRT-202ENST00000373184 CSMD2Q7Z408 3487 aa2.49□□□□□ -2.01
PTPRT-202ENST00000373184 DNAH11Q96DT5 4516 aa2.48□□□□□ -2.01
PTPRT-202ENST00000373184 VPS13BQ7Z7G8 4022 aa2.48□□□□□ -2.01
PTPRT-202ENST00000373184 RYR1P21817 5038 aa2.45□□□□□ -2.02
PTPRT-202ENST00000373184 LORP23490 312 aaPredicted RBP2.45□□□□□ -2.02
PTPRT-202ENST00000373184 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
PTPRT-202ENST00000373184 DNAH5Q8TE73 4624 aa2.43□□□□□ -2.02
PTPRT-202ENST00000373184 KMT2AQ03164 3969 aa2.43□□□□□ -2.02
PTPRT-202ENST00000373184 DYNC1H1Q14204 4646 aaKnown RBP2.41□□□□□ -2.02
PTPRT-202ENST00000373184 FLGP20930 4061 aaPredicted RBP2.4□□□□□ -2.02
PTPRT-202ENST00000373184 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
PTPRT-202ENST00000373184 DNAH9Q9NYC9 4486 aa2.38□□□□□ -2.03
PTPRT-202ENST00000373184 MT1HP80294 61 aa2.37□□□□□ -2.03
PTPRT-202ENST00000373184 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
PTPRT-202ENST00000373184 DYNC2H1Q8NCM8 4307 aaKnown RBP2.36□□□□□ -2.03
PTPRT-202ENST00000373184 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
PTPRT-202ENST00000373184 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
PTPRT-202ENST00000373184 FAT2Q9NYQ8 4349 aa2.35□□□□□ -2.03
PTPRT-202ENST00000373184 MT2AP02795 61 aa2.33□□□□□ -2.04
PTPRT-202ENST00000373184 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
PTPRT-202ENST00000373184 PCLOQ9Y6V0 5065 aa2.33□□□□□ -2.04
PTPRT-202ENST00000373184 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
PTPRT-202ENST00000373184 RYR3Q15413 4870 aa2.31□□□□□ -2.04
PTPRT-202ENST00000373184 LCE3CQ5T5A8 94 aa2.31□□□□□ -2.04
PTPRT-202ENST00000373184 STARD9Q9P2P6 4700 aa2.31□□□□□ -2.04
PTPRT-202ENST00000373184 PKHD1P08F94 4074 aa2.3□□□□□ -2.04
PTPRT-202ENST00000373184 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
PTPRT-202ENST00000373184 PKHD1L1Q86WI1 4243 aa2.29□□□□□ -2.04
PTPRT-202ENST00000373184 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
PTPRT-202ENST00000373184 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
PTPRT-202ENST00000373184 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
PTPRT-202ENST00000373184 MT1FP04733 61 aa2.26□□□□□ -2.05
PTPRT-202ENST00000373184 DNHD1Q96M86 4753 aa2.24□□□□□ -2.05
PTPRT-202ENST00000373184 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PTPRT-202ENST00000373184 SACSQ9NZJ4 4579 aa2.22□□□□□ -2.05
PTPRT-202ENST00000373184 RYR2Q92736 4967 aa2.19□□□□□ -2.06
PTPRT-202ENST00000373184 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
PTPRT-202ENST00000373184 PKD1P98161 4303 aa2.17□□□□□ -2.06
PTPRT-202ENST00000373184 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
PTPRT-202ENST00000373184 MYCBP2O75592 4640 aa2.14□□□□□ -2.07
PTPRT-202ENST00000373184 KRTAP12-4P60329 112 aa2.14□□□□□ -2.07
PTPRT-202ENST00000373184 HYDINQ4G0P3 5121 aa2.14□□□□□ -2.07
PTPRT-202ENST00000373184 KRTAP17-1Q9BYP8 105 aa2.13□□□□□ -2.07
PTPRT-202ENST00000373184 KRTAP19-1Q8IUB9 90 aa2.13□□□□□ -2.07
PTPRT-202ENST00000373184 MT1XP80297 61 aa2.12□□□□□ -2.07
PTPRT-202ENST00000373184 SPRR2EP22531 72 aa2.12□□□□□ -2.07
PTPRT-202ENST00000373184 SPRR2BP35325 72 aa2.12□□□□□ -2.07
PTPRT-202ENST00000373184 SPRR2AP35326 72 aa2.12□□□□□ -2.07
PTPRT-202ENST00000373184 MT1GP13640 62 aa2.12□□□□□ -2.07
PTPRT-202ENST00000373184 HSPG2P98160 4391 aa2.1□□□□□ -2.07
PTPRT-202ENST00000373184 LCE2BO14633 110 aa2.1□□□□□ -2.07
PTPRT-202ENST00000373184 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
PTPRT-202ENST00000373184 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
PTPRT-202ENST00000373184 FAT1Q14517 4588 aa2.09□□□□□ -2.07
PTPRT-202ENST00000373184 SPRR2DP22532 72 aa2.09□□□□□ -2.07
PTPRT-202ENST00000373184 LCE3BQ5TA77 95 aa2.08□□□□□ -2.08
PTPRT-202ENST00000373184 LCE2CQ5TA81 110 aa2.06□□□□□ -2.08
PTPRT-202ENST00000373184 MT1BP07438 61 aa2.04□□□□□ -2.08
PTPRT-202ENST00000373184 KIAA1109Q2LD37 5005 aa2.04□□□□□ -2.08
PTPRT-202ENST00000373184 HERC2O95714 4834 aa2.04□□□□□ -2.08
PTPRT-202ENST00000373184 EPPK1P58107 5090 aaKnown RBP2.03□□□□□ -2.08
PTPRT-202ENST00000373184 KRTAP9-8Q9BYQ0 159 aa2.03□□□□□ -2.08
PTPRT-202ENST00000373184 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
PTPRT-202ENST00000373184 TNXBP22105 4242 aa2.02□□□□□ -2.09
PTPRT-202ENST00000373184 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
PTPRT-202ENST00000373184 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
PTPRT-202ENST00000373184 HERC1Q15751 4861 aa2.02□□□□□ -2.09
PTPRT-202ENST00000373184 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
PTPRT-202ENST00000373184 KRTAP19-3Q7Z4W3 81 aa2.01□□□□□ -2.09
PTPRT-202ENST00000373184 MT1LQ93083 61 aa2□□□□□ -2.09
PTPRT-202ENST00000373184 LCE2DQ5TA82 110 aaPredicted RBP1.99□□□□□ -2.09
PTPRT-202ENST00000373184 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
PTPRT-202ENST00000373184 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
PTPRT-202ENST00000373184 KRTAP4-8A0A0G2JLE6 195 aa1.95□□□□□ -2.1
PTPRT-202ENST00000373184 KRTAP4-8Q9BYQ9 185 aa1.95□□□□□ -2.1
PTPRT-202ENST00000373184 ABCA13Q86UQ4 5058 aa1.93□□□□□ -2.1
PTPRT-202ENST00000373184 MT1EP04732 61 aa1.93□□□□□ -2.1
PTPRT-202ENST00000373184 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
PTPRT-202ENST00000373184 LRP2P98164 4655 aa1.91□□□□□ -2.1
PTPRT-202ENST00000373184 LCE2AQ5TA79 106 aaPredicted RBP1.9□□□□□ -2.11
PTPRT-202ENST00000373184 KRTAP19-6Q3LI70 58 aa1.89□□□□□ -2.11
PTPRT-202ENST00000373184 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
PTPRT-202ENST00000373184 MT1MQ8N339 61 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms